Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq145430 87.8 2e-12
seq28654 86.0 5e-12
>seq145430
Length=989
Score = 87.8 bits (96), Expect = 2e-12
Identities = 186/266 (70%), Gaps = 10/266 (4%)
Strand=Plus/Minus
Query 14780 AACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTGGATGA 14837
|||| ||||||||||| ||||| |||||||| || |||| | || || || ||||||
Sbjct 989 AACAAGGGTTTGTTTTATTATGTGCTGTGGAATATATGTG-ATCGTAAAGAA-TGGATGG 932
Query 14838 ACCAAAATGTGCTTGACCAATTTTG-GAA-ATACGTTAA-ACTTCGCTTACAAAACACTA 14894
||| |||||| | || |||| ||| ||| ||||| || | | | | ||||| |
Sbjct 931 ACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGACGT-GTTGCCGAAACA--A 875
Query 14895 CATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTACTAA 14954
||| | | ||||| | || |||||| |||| || || |||| ||||| |
Sbjct 874 AATGTTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTGCCTG 815
Query 14955 CAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTACATT 15014
|||| || ||||| ||||| || | || || ||||||||||| |||| | ||||
Sbjct 814 CAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGCGCATT 755
Query 15015 ACACCAATGAAAGACTGCGACTTTAT 15040
|| |||| |||||| ||| | ||||
Sbjct 754 ACTCCAAAGAAAGATTGCAAAATTAT 729
>seq28654
Length=3315
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| || || |||||||| || || ||||| ||||||||||| | | ||| || |
Sbjct 2172 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 2231
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || || ||||| || ||||| ||||| | ||| || || | ||| | | |||||||
Sbjct 2232 TCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 2291
Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249
|| ||| || || | | | | || ||| || ||| || || | |||||
Sbjct 2292 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 2351
Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||||| || || || ||||||||||| |||||
Sbjct 2352 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 2386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428095046388779
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |