Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq61277 118 9e-22 seq76033 86.0 5e-12 >seq61277 Length=456 Score = 118 bits (130), Expect = 9e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 29668 GTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727 ||| | ||| ||||| ||||||||||||| || || ||||||| || ||| || || Sbjct 420 GTACAGGTGCGCATCGCCCAGGGTGTGGATGAAGTCGCCCGGTTGCAGACCGACCACCTG 361 Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787 || | || || | || || | |||| |||||||| || ||||||||||| | Sbjct 360 GGCGACCAGGTGCACCAGCAGGGCGTAGGACGCGATGTTGAACGGCACCCCGAGGAAGAC 301 Query 29788 GTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACA 29847 |||| | || | ||||| |||||||||||||||| |||||| ||||| ||||| | Sbjct 300 GTCCGCCGAGCGTTGGTACAGCTGGCACGAGAGCTTGCCGTCGGCGACGTAGAACTGGAA 241 Query 29848 CATGGCATGGCACGGAGGAAGGGCCATG 29875 || | |||||||| || || |||||| Sbjct 240 CAGCGAGTGGCACGGCGGTAGCGCCATG 213 >seq76033 Length=7108 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 |||||||||| ||||| || | ||| |||||||| || ||||| ||||| || | Sbjct 6458 GCCATCATGTGGGTGAGCAGGGCATAGGACGCGATGTTGAACGGCACACCGAGGAACAGG 6399 Query 29789 TC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGAC 29846 || | ||| | ||| ||||||||||| ||||| | ||||||| ||||| ||||| Sbjct 6398 TCGGCACTG--CGCTGATAGAGCTGGCAGGAGAGTTTTCCGTCGGCGACGTAGAACTGGA 6341 Query 29847 ACATGGCATGGCACGGAGGAAGGGCCAT 29874 | | ||| |||||||| || | ||||| Sbjct 6340 AGAAGGCGTGGCACGGCGGCAACGCCAT 6313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404791607562538