Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq7533 86.0 5e-12
>seq7533
Length=2710
Score = 86.0 bits (94), Expect = 5e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGAC 5096
|||| ||| || |||||||| ||||||||||||| ||||| |||||||| ||||| |
Sbjct 680 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 621
Query 5097 CAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
|| ||||| ||||| || || || | ||| |||||
Sbjct 620 CATATATCTGGATATTGGATTGGGAATATAACAAA 586
Score = 82.4 bits (90), Expect = 6e-11
Identities = 167/244 (68%), Gaps = 7/244 (3%)
Strand=Plus/Minus
Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611
|||||| || | || |||| | || || ||| ||||| ||| || || |||||||
Sbjct 1876 CAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGG 1818
Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671
|||| | ||||| ||||| | ||||||||| | ||||| || || || ||||| |
Sbjct 1817 GCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTC 1758
Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTT--TGTCTTTAA 4728
| || || || ||||| || | || || || || | ||||| ||| || | |
Sbjct 1757 CCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCC---GA 1701
Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788
|||| | ||| ||||||| || || |||||||| || || | || | || || || |
Sbjct 1700 TCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGA 1641
Query 4789 ATAA 4792
||||
Sbjct 1640 ATAA 1637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425607475253639
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |