Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7533 86.0 5e-12 >seq7533 Length=2710 Score = 86.0 bits (94), Expect = 5e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGAC 5096 |||| ||| || |||||||| ||||||||||||| ||||| |||||||| ||||| | Sbjct 680 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 621 Query 5097 CAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 || ||||| ||||| || || || | ||| ||||| Sbjct 620 CATATATCTGGATATTGGATTGGGAATATAACAAA 586 Score = 82.4 bits (90), Expect = 6e-11 Identities = 167/244 (68%), Gaps = 7/244 (3%) Strand=Plus/Minus Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611 |||||| || | || |||| | || || ||| ||||| ||| || || ||||||| Sbjct 1876 CAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGG 1818 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||| | ||||| ||||| | ||||||||| | ||||| || || || ||||| | Sbjct 1817 GCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTC 1758 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTT--TGTCTTTAA 4728 | || || || ||||| || | || || || || | ||||| ||| || | | Sbjct 1757 CCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCC---GA 1701 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| | ||| ||||||| || || |||||||| || || | || | || || || | Sbjct 1700 TCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGA 1641 Query 4789 ATAA 4792 |||| Sbjct 1640 ATAA 1637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425607475253639