Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_030909.1
Length=50183
Score E
Sequences producing significant alignments: (Bits) Value
seq207439 165 3e-36
seq101952 118 3e-22
seq185731 113 1e-20
seq238992 100 9e-17
seq111113 100 9e-17
seq252665 98.7 3e-16
>seq207439
Length=1826
Score = 165 bits (182), Expect = 3e-36
Identities = 264/377 (70%), Gaps = 18/377 (5%)
Strand=Plus/Minus
Query 33976 GTGCTTGGCTCGCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCG---CGGTAC 34032
|||| | |||||||||||||||||| | | |||| || ||| ||||| |||| |
Sbjct 1816 GTGCGGGTCTCGCCGTTGCGGTGCTTGACCACCATCAGGTCGGCCTCGCCGGGGCGGTCC 1757
Query 34033 TGGGTGTCCGGGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGC 34092
| || ||| ||| | ||| |||| |||| |||| ||||| |||||||||
Sbjct 1756 TCGGAGTCG------TAGGCATCGGGCCGGTGGACGAGGATGACGACGTCCGCGTCCTGC 1703
Query 34093 TCGATCGCCCCGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCC 34152
|||| || || ||||| ||||||||||||| |||||| ||||||| | ||||||||||
Sbjct 1702 TCGAGCGAACCCGACTCACGCAGGTCCGACAGCATCGGCCGCTTGTCGGTCCGCTGCTCC 1643
Query 34153 AGGGAGCGGTTGAGCTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGC 34212
| ||||| ||||| || ||| | | ||| || | | |||||| |||| || | |
Sbjct 1642 GCGCCACGGTTCAGCTGGGAGAGCGCCACCACCGGCAGCTCGAGCTCCTTGGCGAGCAAC 1583
Query 34213 TTGCACTGGCGGGACATGTCGCTGACGTCCT--CGGTGCGAGTTGA----CTTGCCGGAG 34266
|| ||| ||||| | || ||| |||| || | || | | |||||||||
Sbjct 1582 TTCATCTGCCGGGAGAACTCCGAGACCTCCTGCTGGCGGGACTCCACCTTCTTGCCGGA- 1524
Query 34267 CTCTCCAGCAACTGCAGGTAGTCCACCACCAGCAGGCTCAACCCATGGCGCTGCTTGTGA 34326
| || || ||||||||||||||| || | ||| ||| | || ||||||||| |
Sbjct 1523 --CGTCATCAGCTGCAGGTAGTCCACGACGATCAGCTTCAGGTCGTGCCGCTGCTTGAGC 1466
Query 34327 CGCCGGGCCAAGGCCCG 34343
||||| ||| ||||||
Sbjct 1465 CGCCGCGCCTTGGCCCG 1449
>seq101952
Length=1540
Score = 118 bits (130), Expect = 3e-22
Identities = 132/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113
|| || |||| || | ||||| | ||||||||||||||| | || ||||||||||||
Sbjct 693 TCCTCGCGGTGCAGCAGGATGATGATGTCGGCGTCCTGCTCCAGCGAGCCGGACTCGCGC 752
Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGTTGAGCTGCGA 34172
||||| | |||||| || |||||| ||||| || ||| || ||||||||||| ||
Sbjct 753 AGGTCGGCCATCATGGGGCGCTTG-TCGGCGCGGGTCTCGGGGCCACGGTTGAGCTGGGA 811
Query 34173 CAGCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTGCACTGGCGGGA 34226
||| ||| | ||||| | |||||| ||||||| |||||| ||| |||||
Sbjct 812 GAGCGCGACGATCGGGATCTCGAGCTCCTTGGCCAGCAGCTTGATCTGCCGGGA 865
>seq185731
Length=264
Score = 113 bits (124), Expect = 1e-20
Identities = 175/246 (71%), Gaps = 8/246 (3%)
Strand=Plus/Minus
Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTAC--TGGGTGTCCGGG 34044
|||||| |||||||| |||||||||| || ||| ||||| | || | ||| || ||
Sbjct 250 GCCGTTACGGTGCTTGGCGATGATCAGGTCGGCCTCGCCG--GCACGTTCGGTCTCGGGC 193
Query 34045 TGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCG 34104
| |||| ||| |||| |||| | | ||||||| |||||||||||||| |||
Sbjct 192 TCGTAGAGATCGGGGCGGTGGACGAGGAGCACGACGTCGGAGTCCTGCTCGATCGAGCCG 133
Query 34105 GACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGA--GCGGT 34162
||||| |||||||| |||| |||||| ||||| | |||||||| |||| ||||
Sbjct 132 GACTCACGCAGGTCGGACAGCATCGGCTTCTTGTCGGTGCGCTGCTC--GGGACCACGGT 75
Query 34163 TGAGCTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTGCACTGGC 34222
| ||||| || | | | ||| || | | |||||| | || || |||||| ||| |
Sbjct 74 TCAGCTGGCTCATCGCCACCACCGGAACCTCGAGCTCCTTCGCGAGAAGCTTGATCTGCC 15
Query 34223 GGGACA 34228
||||
Sbjct 14 TTGACA 9
>seq238992
Length=528
Score = 100 bits (110), Expect = 9e-17
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 34052 CCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGC 34111
|||| || ||||| ||||| | ||||||||||||||||||||||||| ||| || |
Sbjct 117 CCTCCTCGCGGTAGACGAAGAGGATCACGTCGGCGTCCTGCTCGATCTGGCCGCTGTCAC 176
Query 34112 GCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCG 34171
| ||||| || ||| || ||||||| ||| |||| ||| | | |||| |||||||||
Sbjct 177 GGAGGTCGGATGGCATGGGCCGCTTGTCCGGACGCTTCTCAACGTCGCGGCTGAGCTGCG 236
Query 34172 ACAGCACGATCAC 34184
|| | | |||||
Sbjct 237 CCACCGCCATCAC 249
>seq111113
Length=4129
Score = 100 bits (110), Expect = 9e-17
Identities = 248/368 (67%), Gaps = 19/368 (5%)
Strand=Plus/Minus
Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGT--GTCCGGG 34044
||||||||||||||| ||| ||| | || ||| ||||| | | ||| ||| |
Sbjct 4020 GCCGTTGCGGTGCTTGCCGAGGATGATGTCGGCCTCGCCGGCG--CGGGGATCGTCGCGC 3963
Query 34045 T-GATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103
| ||| || ||| |||| || | || | || ||| ||||||||||| | || ||
Sbjct 3962 TCGATGGAG-TCGGGGCGGTGCAGCAGGATCACCATGTCCGCGTCCTGCTCCAGCGAACC 3904
Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGC--GG 34161
||||| || || ||||||| | |||||||||| | |||||||| |||| | ||
Sbjct 3903 CGACTCACGGAGATCCGACACCTGGGGTCGCTTGTCGGTGCGCTGCTC--GGGACCACGG 3846
Query 34162 TTGAGCTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTGCACTGG 34221
|||||||| | ||| ||| || | | |||||| |||||| |||||| |||
Sbjct 3845 TTGAGCTGGCTGATGGCGACCACCGGCACCTCGAGCTCCTTGGCCAACAGCTTGAGCTGA 3786
Query 34222 CGGGACATGTCGCTGACGTCCT--CGGTGCGAGTTGA----CTTGCCGGAGCTCTCCAGC 34275
||||| | || ||| |||| || |||| | || |||||| || | || |
Sbjct 3785 CGGGAGAACTCCGAGACCTCCTGCTGGCGCGACTCGACCTTCTTGCCCGA---CGTCATC 3729
Query 34276 AACTGCAGGTAGTCCACCACCAGCAGGCTCAACCCATGGCGCTGCTTGTGACGCCGGGCC 34335
| ||||| |||||| | |||| ||| | | | || ||||||||| | || ||||||
Sbjct 3728 AGCTGCATGTAGTCGATGACCACCAGCCGTAGATCGTGACGCTGCTTGAGGCGACGGGCC 3669
Query 34336 AAGGCCCG 34343
||| ||
Sbjct 3668 TTGGCGCG 3661
>seq252665
Length=347
Score = 98.7 bits (108), Expect = 3e-16
Identities = 106/138 (77%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113
||||| ||||| || ||||| | | ||||||| ||||| ||||||| ||||| ||||||
Sbjct 190 TCGTCGCGGTAGACAAACATCACCGCGTCGGCATCCTGTTCGATCGAGCCGGATTCGCGC 131
Query 34114 AGGTCCGACATCATCGGTCGCTTGT-TCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGA 34172
|||||||||| |||||| || |||| | || ||| || | || |||| ||||||
Sbjct 130 AGGTCCGACAGCATCGGACGTTTGTCTTCGCGGCT-TTCGACGGCGCGGGAGAGCTGGCT 72
Query 34173 CAGCACGATCACGGGGAT 34190
||| ||| ||||||||
Sbjct 71 CAGTGCGAGGACGGGGAT 54
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159936015572670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |