Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_030913.1 Length=58308 Score E Sequences producing significant alignments: (Bits) Value seq219746 174 6e-39 seq148523 122 3e-23 seq210609 98.7 4e-16 >seq219746 Length=1062 Score = 174 bits (192), Expect = 6e-39 Identities = 416/636 (65%), Gaps = 32/636 (5%) Strand=Plus/Plus Query 43910 GTGCACCAACCACTCGGTAGCGAAGGGCCGCAAACGGGTTGGCGCGCAACCAGACCTGTT 43969 ||||||| | |||||||| || ||||| ||| || | | | || || |||| Sbjct 24 GTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCCGACCCCAA 83 Query 43970 CGGCGAGATCCTGCCCGACGCTGCATCGGAGCGGTCCCGAGCGACGATGTGGGACGTCCC 44029 ||| ||| | ||||||||| || | || || || || |||||||||||||||||| Sbjct 84 CGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGGGACGTCGT 143 Query 44030 GCGGTTCGCCGAGGTCCACCATTACCGCGCCGTGATCGTCGAGAACGTCGTCGACGCCTG 44089 |||||||||||| |||||| ||||| | | ||||||| ||||| ||||||| Sbjct 144 CCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTCGACG---T 200 Query 44090 GCATTGGGTTCCGT--TCCGCGCC-TGGCTCATGGCTATGGACTGCCTCGGCTACGACCA 44146 | ||| |||| | |||||| |||||| || | |||| ||| |||||| |||| Sbjct 201 GTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTACAACCA 260 Query 44147 CCACATCGTCATGCTCAACTCGATGCACGCCCAGACGTTCGGCCCCGGGGCGCCGCAGTC 44206 | | ||||| |||||||||||||||||| ||| |||||| | ||| || || || Sbjct 261 CGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCTCAATC 320 Query 44207 CCGCGACCGCATGTACGTCGTGTTCTGGCACAAAGGGAACCCGCGCCCGGACCTCGGCCG 44266 | ||| | || || ||||| Sbjct 321 AAGGGACAGGATCTATGTCGT----------NNNNNNNNNNNNNNNNNNNNNNNNNNNNN 370 Query 44267 CGTGGTCCGGCCGAACGCGATCTGCGCGGAGTGCGGCCCGGTCGCCGCCCTGCAGTCGTT 44326 ||||| || | ||| || ||| ||||| ||| | || || | | Sbjct 371 CGTGG-----------GCTGTGTGCCCGTCGTGTGGCCCTGTCCAGTCGGTGAAGACCTG 419 Query 44327 CAAACGCCAGG-GCAACACCTGGGGCCGGTACCGCGCCCAGTACGTCTACCGCTGCCCGA 44385 || |||| || || || |||||||| ||||||||||||||| | | |||||||| Sbjct 420 GAAGCGCCCGGAGCGTCA-GTGGGGCCGCTACCGCGCCCAGTACACGTTCTCCTGCCCGA 478 Query 44386 ACGTCCGCTGCCGCAACGCGATCATCGAACCGCTCTACCGCCCGGCCGCCGACATCATCG 44445 ||| ||| || || | | ||||| || || || ||||| |||||||||| Sbjct 479 ACG---GCTCATGCGCGGCCACAGTGGAACCCGACTGGCGACCCGCCGCAGACATCATCG 535 Query 44446 ACTGGACCCTCGAAGGCCAGCGCATCGGCGACCGCGCAAAACCGCTCGCCGCGAAGACCA 44505 ||||| | || ||| |||||||| |||||| | ||||| |||| |||||||| Sbjct 536 ACTGGTCGCTGCCCGGCACCCGCATCGGTGACCGCAAACGCCCGCTGGCCGAGAAGACCA 595 Query 44506 TGGCGCGCATCCAGGCCGGGATCGATCGCTACTGGG 44541 || | || ||||||||||||||||| |||||||||| Sbjct 596 TGACCCGTATCCAGGCCGGGATCGACCGCTACTGGG 631 >seq148523 Length=1916 Score = 122 bits (134), Expect = 3e-23 Identities = 296/442 (67%), Gaps = 55/442 (12%) Strand=Plus/Plus Query 3789 CATGAAGTGTCTGACGGTGCAGCAGCCGTGGGCGTGGGCGATCGTGCGCGGCGGGAAACT 3848 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 1474 CATGAAGGCGTTGACGGTGCAGCAGCCGTGGGCGTGGGCGATCGTGCACGGCGGGAAGCT 1533 Query 3849 CATCGAGAACCGCACCCAGACATGGAACTACCGCGGACCCCTCGCTATCCACGCCGGACA 3908 |||||||||||||| |||| ||| ||| |||| || Sbjct 1534 GATCGAGAACCGCACACAGAACTGG----------------TCG-TATCTCCG------- 1569 Query 3909 ACGCTGGTCCGACCGCGGCGCGCAGTCCGACCTCGTGCACCGCGCCTGGTACGAACACCA 3968 || |||| |||||| || ||| ||||| || || ||| || ||| Sbjct 1570 ACCGTGGT--------GGCGCG-AG--CGAGCTCGTCGCCCAGGCGTGGAGGGATCACGG 1618 Query 3969 CCCGTCGCACAGCATCACCCGTGGTGAACTCCCCGAGTGGCAGTTCGAGAAGGGCTCCAT 4028 || || || || | ||| | | ||| | || |||| | ||| | | Sbjct 1619 CC---CGGACGGCGT----CGTCGAG------CCG-GCCGC-GTTCATCTACGGCGCATT 1663 Query 4029 CATCGGCGTAGTCGACCTCGTCGACGTCCACCCCGACGCCGGATGCTGCCGCCCCTGGGG 4088 | |||| || |||||||||||||| || ||||||||| |||| || |||||||| ||||| Sbjct 1664 CGTCGGTGTCGTCGACCTCGTCGATGTGCACCCCGACACCGGGTGTTGCCGCCCGTGGGG 1723 Query 4089 TGAGAGCGCCTACACCGAAGCCGAAGGCCGTGTCCGCCACCTGATCAGCCACCTCGTCCT 4148 |||| |||||| ||| || || | |||| || ||| ||||||||| || Sbjct 1724 TGAGTCGGCCTACGACGAGCACGGCGGACAGACCCGCAACGGCGTCACCCACCTCGTGCT 1783 Query 4149 CGAGAACCCCCGCAAGCTCACCGA-ACCGATCCCCGCCCGCGGGGCACTCGGCCTGTGGA 4207 |||| |||| || || ||| |||| || || || || || || || || || ||||||| Sbjct 1784 CGAGCACCCACGGAACCTC-CCGACGCCCATACCGGCGCGGGGCGCGCTGGGTCTGTGGA 1842 Query 4208 ACCTC-GCC--GACGACGTCGA 4226 || | ||| |||||| ||| Sbjct 1843 CCCCCAGCCCGTACGACGCCGA 1864 >seq210609 Length=1060 Score = 98.7 bits (108), Expect = 4e-16 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 22482 ACGTGGTTGTGGCAGAACGTCATTCAGCCTGCGTTCTCGTTCATCGGCACCATCATCGGT 22541 |||||| | ||| | |||| || ||| |||||| ||||||||| |||||||| Sbjct 684 ACGTGGCTATGGAACAACGCGATCATGCCCGCGTTCAACGGGATCGGCACCGTCATCGGT 625 Query 22542 GGTGTCTGGAACGTGGTGAAGTTCATCTTCAACTCGTGGATGACCATTTT--CCGGGCCG 22599 | ||| || |||||| |||||||| || |||| |||| | | |||| | Sbjct 624 GTCTGGTGGTCCGGCGTGAAGGTCATCTTCGACGTCTGGAAGACCGTCCTGACCGGT--G 567 Query 22600 CCGGCGCCGTGGTGATGTGGTTGTGGAACAACGTAGTTACGCCCGCGTTCAACGCCATCA 22659 |||| | ||| ||||||||| ||||||||||||| || || || |||||| ||| ||||| Sbjct 566 CCGGTGACGTCGTGATGTGGCTGTGGAACAACGTCGTGACCCCGGCGTTCGACGGCATCA 507 Query 22660 AG 22661 || Sbjct 506 AG 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185850466196420