Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_030913.1
Length=58308
Score E
Sequences producing significant alignments: (Bits) Value
seq219746 174 6e-39
seq148523 122 3e-23
seq210609 98.7 4e-16
>seq219746
Length=1062
Score = 174 bits (192), Expect = 6e-39
Identities = 416/636 (65%), Gaps = 32/636 (5%)
Strand=Plus/Plus
Query 43910 GTGCACCAACCACTCGGTAGCGAAGGGCCGCAAACGGGTTGGCGCGCAACCAGACCTGTT 43969
||||||| | |||||||| || ||||| ||| || | | | || || ||||
Sbjct 24 GTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCCGACCCCAA 83
Query 43970 CGGCGAGATCCTGCCCGACGCTGCATCGGAGCGGTCCCGAGCGACGATGTGGGACGTCCC 44029
||| ||| | ||||||||| || | || || || || ||||||||||||||||||
Sbjct 84 CGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGGGACGTCGT 143
Query 44030 GCGGTTCGCCGAGGTCCACCATTACCGCGCCGTGATCGTCGAGAACGTCGTCGACGCCTG 44089
|||||||||||| |||||| ||||| | | ||||||| ||||| |||||||
Sbjct 144 CCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTCGACG---T 200
Query 44090 GCATTGGGTTCCGT--TCCGCGCC-TGGCTCATGGCTATGGACTGCCTCGGCTACGACCA 44146
| ||| |||| | |||||| |||||| || | |||| ||| |||||| ||||
Sbjct 201 GTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTACAACCA 260
Query 44147 CCACATCGTCATGCTCAACTCGATGCACGCCCAGACGTTCGGCCCCGGGGCGCCGCAGTC 44206
| | ||||| |||||||||||||||||| ||| |||||| | ||| || || ||
Sbjct 261 CGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCTCAATC 320
Query 44207 CCGCGACCGCATGTACGTCGTGTTCTGGCACAAAGGGAACCCGCGCCCGGACCTCGGCCG 44266
| ||| | || || |||||
Sbjct 321 AAGGGACAGGATCTATGTCGT----------NNNNNNNNNNNNNNNNNNNNNNNNNNNNN 370
Query 44267 CGTGGTCCGGCCGAACGCGATCTGCGCGGAGTGCGGCCCGGTCGCCGCCCTGCAGTCGTT 44326
||||| || | ||| || ||| ||||| ||| | || || | |
Sbjct 371 CGTGG-----------GCTGTGTGCCCGTCGTGTGGCCCTGTCCAGTCGGTGAAGACCTG 419
Query 44327 CAAACGCCAGG-GCAACACCTGGGGCCGGTACCGCGCCCAGTACGTCTACCGCTGCCCGA 44385
|| |||| || || || |||||||| ||||||||||||||| | | ||||||||
Sbjct 420 GAAGCGCCCGGAGCGTCA-GTGGGGCCGCTACCGCGCCCAGTACACGTTCTCCTGCCCGA 478
Query 44386 ACGTCCGCTGCCGCAACGCGATCATCGAACCGCTCTACCGCCCGGCCGCCGACATCATCG 44445
||| ||| || || | | ||||| || || || ||||| ||||||||||
Sbjct 479 ACG---GCTCATGCGCGGCCACAGTGGAACCCGACTGGCGACCCGCCGCAGACATCATCG 535
Query 44446 ACTGGACCCTCGAAGGCCAGCGCATCGGCGACCGCGCAAAACCGCTCGCCGCGAAGACCA 44505
||||| | || ||| |||||||| |||||| | ||||| |||| ||||||||
Sbjct 536 ACTGGTCGCTGCCCGGCACCCGCATCGGTGACCGCAAACGCCCGCTGGCCGAGAAGACCA 595
Query 44506 TGGCGCGCATCCAGGCCGGGATCGATCGCTACTGGG 44541
|| | || ||||||||||||||||| ||||||||||
Sbjct 596 TGACCCGTATCCAGGCCGGGATCGACCGCTACTGGG 631
>seq148523
Length=1916
Score = 122 bits (134), Expect = 3e-23
Identities = 296/442 (67%), Gaps = 55/442 (12%)
Strand=Plus/Plus
Query 3789 CATGAAGTGTCTGACGGTGCAGCAGCCGTGGGCGTGGGCGATCGTGCGCGGCGGGAAACT 3848
||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1474 CATGAAGGCGTTGACGGTGCAGCAGCCGTGGGCGTGGGCGATCGTGCACGGCGGGAAGCT 1533
Query 3849 CATCGAGAACCGCACCCAGACATGGAACTACCGCGGACCCCTCGCTATCCACGCCGGACA 3908
|||||||||||||| |||| ||| ||| |||| ||
Sbjct 1534 GATCGAGAACCGCACACAGAACTGG----------------TCG-TATCTCCG------- 1569
Query 3909 ACGCTGGTCCGACCGCGGCGCGCAGTCCGACCTCGTGCACCGCGCCTGGTACGAACACCA 3968
|| |||| |||||| || ||| ||||| || || ||| || |||
Sbjct 1570 ACCGTGGT--------GGCGCG-AG--CGAGCTCGTCGCCCAGGCGTGGAGGGATCACGG 1618
Query 3969 CCCGTCGCACAGCATCACCCGTGGTGAACTCCCCGAGTGGCAGTTCGAGAAGGGCTCCAT 4028
|| || || || | ||| | | ||| | || |||| | ||| | |
Sbjct 1619 CC---CGGACGGCGT----CGTCGAG------CCG-GCCGC-GTTCATCTACGGCGCATT 1663
Query 4029 CATCGGCGTAGTCGACCTCGTCGACGTCCACCCCGACGCCGGATGCTGCCGCCCCTGGGG 4088
| |||| || |||||||||||||| || ||||||||| |||| || |||||||| |||||
Sbjct 1664 CGTCGGTGTCGTCGACCTCGTCGATGTGCACCCCGACACCGGGTGTTGCCGCCCGTGGGG 1723
Query 4089 TGAGAGCGCCTACACCGAAGCCGAAGGCCGTGTCCGCCACCTGATCAGCCACCTCGTCCT 4148
|||| |||||| ||| || || | |||| || ||| ||||||||| ||
Sbjct 1724 TGAGTCGGCCTACGACGAGCACGGCGGACAGACCCGCAACGGCGTCACCCACCTCGTGCT 1783
Query 4149 CGAGAACCCCCGCAAGCTCACCGA-ACCGATCCCCGCCCGCGGGGCACTCGGCCTGTGGA 4207
|||| |||| || || ||| |||| || || || || || || || || || |||||||
Sbjct 1784 CGAGCACCCACGGAACCTC-CCGACGCCCATACCGGCGCGGGGCGCGCTGGGTCTGTGGA 1842
Query 4208 ACCTC-GCC--GACGACGTCGA 4226
|| | ||| |||||| |||
Sbjct 1843 CCCCCAGCCCGTACGACGCCGA 1864
>seq210609
Length=1060
Score = 98.7 bits (108), Expect = 4e-16
Identities = 132/182 (73%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 22482 ACGTGGTTGTGGCAGAACGTCATTCAGCCTGCGTTCTCGTTCATCGGCACCATCATCGGT 22541
|||||| | ||| | |||| || ||| |||||| ||||||||| ||||||||
Sbjct 684 ACGTGGCTATGGAACAACGCGATCATGCCCGCGTTCAACGGGATCGGCACCGTCATCGGT 625
Query 22542 GGTGTCTGGAACGTGGTGAAGTTCATCTTCAACTCGTGGATGACCATTTT--CCGGGCCG 22599
| ||| || |||||| |||||||| || |||| |||| | | |||| |
Sbjct 624 GTCTGGTGGTCCGGCGTGAAGGTCATCTTCGACGTCTGGAAGACCGTCCTGACCGGT--G 567
Query 22600 CCGGCGCCGTGGTGATGTGGTTGTGGAACAACGTAGTTACGCCCGCGTTCAACGCCATCA 22659
|||| | ||| ||||||||| ||||||||||||| || || || |||||| ||| |||||
Sbjct 566 CCGGTGACGTCGTGATGTGGCTGTGGAACAACGTCGTGACCCCGGCGTTCGACGGCATCA 507
Query 22660 AG 22661
||
Sbjct 506 AG 505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185850466196420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |