Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_030916.1
Length=56212
Score E
Sequences producing significant alignments: (Bits) Value
seq219746 145 3e-30
seq54171 136 1e-27
seq208699 102 3e-17
seq189415 89.7 2e-13
seq229633 84.2 8e-12
>seq219746
Length=1062
Score = 145 bits (160), Expect = 3e-30
Identities = 211/297 (71%), Gaps = 11/297 (4%)
Strand=Plus/Plus
Query 47266 TGGTTCAGCCCGGAGTGCACCAACCACTCGCAGGCCAAGGGCAAGAAGCGCGCCCTGCGC 47325
|||||| |||| ||||||| | |||||| ||| |||||| |||||||||
Sbjct 10 TGGTTCTCCCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCC------ 63
Query 47326 GGCGACGCCCAGCCGGACCTATTCGGCGAGATCCTGCCCGACGCCGCCGCCGAGCGGTCC 47385
||| | || |||| ||| ||| | ||||||||| ||||||||| || ||
Sbjct 64 ---GACAAGCGCCCCGACCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCG 120
Query 47386 AGAGCGACGATGTGGGACGTCGTCCGGTTCACCGAGCACTTCAAGTACCGGATC-GTCAT 47444
| ||||||||||||||||||||||||||| ||||| || | |||||| |||| || |
Sbjct 121 CGGGCGACGATGTGGGACGTCGTCCGGTTCGCCGAGTACCACCAGTACC-GATCAATCGT 179
Query 47445 CACCGAGAACGTGATCGAGGCCGCCGCGTGGGCACTGTTCGACGCGTGGATCGCCGCGAT 47504
| ||| ||||| |||| | ||| | |||||| ||||| |||||||||
Sbjct 180 CGTCGAAAACGTTGTCGACGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGAC 239
Query 47505 GCGCGCCCTCGGCTACCGGCACCGCCTCGTCATGCTGAACTCGATGCACGCGCAGCT 47561
| |||||| |||||| ||| |||| ||| ||||||||||||||||||||
Sbjct 240 GGACGCCCTGGGCTACAACCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCT 296
Score = 86.0 bits (94), Expect = 2e-12
Identities = 95/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 47815 GACATCATCGACTGGACGAACCTCGGCCAGCGCATCGGCGACCGCGACAAGGCC-CTCGC 47873
||||||||||||||| || | |||| |||||||| |||||| | | | || || ||
Sbjct 526 GACATCATCGACTGGTCGCTGCCCGGCACCCGCATCGGTGACCGC-AAACGCCCGCTGGC 584
Query 47874 CGAGAAGACGCTCGCGCGGATCCGCGCCGGCATCGAGCGCTACTGGCGACCGATGCTCAT 47933
||||||||| | | || |||| ||||| ||||| ||||||||| ||||| | ||||
Sbjct 585 CGAGAAGACCATGACCCGTATCCAGGCCGGGATCGACCGCTACTGGGGACCGTTCCTCAC 644
Query 47934 CGAG 47937
||||
Sbjct 645 CGAG 648
>seq54171
Length=260
Score = 136 bits (150), Expect = 1e-27
Identities = 181/262 (69%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 28508 GATCCCACCTGGCTCCCCGAGGTGCTGCGCGCCGCCGGGCTCCGCTGCGACGTCTACCCC 28567
||||||| |||||||||||||||||||||||| || | ||| |||||| ||||||||
Sbjct 1 GATCCCATCTGGCTCCCCGAGGTGCTGCGCGCAGCGCGCCTCACATGCGACATCTACCCC 60
Query 28568 GGCGCGATGAACCGCGGCCACGGCGACTTCGGCGACATCTGGGGCGTCGTCGCCCACCAC 28627
||||| | | |||||||||||||||||||| ||||||||| || ||| |||||||
Sbjct 61 GGCGCATTCCAGCGCGGCCACGGCGACTTCGGGTCGATCTGGGGCATCCTCGACCACCAC 120
Query 28628 ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCCTCGGCCTCGCG 28687
|| | ||||| || |||
Sbjct 121 ACCGGCAGCTTCGGCGAGACGCCGCGCGGTATCGCCGAGCACCCGTCGCTCGGTCTGGCG 180
Query 28688 TCGCAGCTCTACCTGTCCCGCGACGG--CGTCTACACGCTGTGCGGTGTCGGGATCGCGT 28745
|||||||| |||| || | ||| || || |||||||||||| |||||||||||||| |
Sbjct 181 TCGCAGCTGCACCTCTCGC-CGAAGGGTCG-CTACACGCTGTGTGGTGTCGGGATCGCCT 238
Query 28746 GGCACGCCGGCACCGGCTCCTG 28767
|||||||||||||||| || ||
Sbjct 239 GGCACGCCGGCACCGGGTCGTG 260
>seq208699
Length=382
Score = 102 bits (112), Expect = 3e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 6388 ACCGACCTCGTCAGCCCTGCCGAGCTCACCGGGTTCGCCCGGGCCGCGCAGGAGGACATC 6447
|| ||| || || ||| ||| || ||||||| |||||| ||| | | ||||| |
Sbjct 21 ACTGACGTCATCGACCCGGCCACTCTGACCGGGTACGCCCGCGCCTCCCTCGAGGAGTAC 80
Query 6448 GAGCGCACCAAGGGCACGCTCGCCCGGTGGCTGCCGAACACCAGCGTCCCCGACGTGGTG 6507
||| ||||||| ||||||||| || ||||||||| || |||| | ||||| |||
Sbjct 81 GAGAAGCGCAAGGGCTCGCTCGCCCAGTACCTGCCGAACCTCAACGTCGCAGACGTCGTG 140
Query 6508 GTCCGCACCGTCGTCGGCACCGACGGCAACGGCG-AGCTCGCGAAGTTCCGCGCGTTCGA 6566
||||| ||||||||| | ||| | | | | || |||||||||||| ||||||||
Sbjct 141 GTCCGGTTCGTCGTCGGG-CAGACCGGACTCGTGCAGGCCGCGAAGTTCCGTGCGTTCGA 199
Query 6567 CGCCGAGACCCCGATCGG 6584
||| ||| || | ||||
Sbjct 200 CGCGGAGCCCGAGGTCGG 217
>seq189415
Length=2896
Score = 89.7 bits (98), Expect = 2e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 46489 AGTGGCACGACCTCGGCCTCTGCCGCG-AGGTCGACCCGGACCTGTGGTTCCCCGAGCGG 46547
||||||| |||| | || ||| ||| || |||||| || || ||||||||| |
Sbjct 571 AGTGGCAGGACCGGGCGCTGTGC-GCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAG 513
Query 46548 GGCGGATCGACCCGCGACGCGAAGCGGATCTGCAGGCGCTGCCCCGTCCAGGAGAAGTGC 46607
||||| ||||||||||| || ||||| |||||| | ||||| || ||| | |||||
Sbjct 512 GGCGGCTCGACCCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTGC 453
Query 46608 CTGCAGCAGGCACTCGACGCGGGGGAGCGGTTCGGAGTGTGGGGCGGCGTCAGCGAACGC 46667
|| || | || || || || ||||||||||| | |||||||| || ||| ||
Sbjct 452 CTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCGG 393
Query 46668 GAACGCCG 46675
|| || ||
Sbjct 392 GAGCGTCG 385
>seq229633
Length=1804
Score = 84.2 bits (92), Expect = 8e-12
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 46503 GGCCTCTGCCGCGAGGTCGACCCGGACCTGTGGTTCCCCGAGCGGGGCG-GATCGACCCG 46561
||||| || | ||||||||||||| ||||||||||||| |||| || | |||||
Sbjct 1582 GGCCTGTGTAGTCAGGTCGACCCGGAGTTGTGGTTCCCCGACATCGGCGAGAAC-ACCCG 1640
Query 46562 CGACGCGAAGCGGATCTGCAGGCGCTGCCCCGTCCAGGAGAAGTGCCTGCAGCAGGCACT 46621
| ||||||||||||||| | |||||| ||| || | ||||| | | || ||
Sbjct 1641 GGCAGCGAAGCGGATCTGCGCGGACTGCCCGGTCACCGATGAATGCCTCGAATACGCCCT 1700
Query 46622 CGACGCGGGGGAGCGGTTCGGAGTGTGGGGCGGCGTCAGCGAACGCGAACGCCGCCAGAT 46681
| ||| | || |||||||| |||||||| || || || | |||||||| | |||
Sbjct 1701 GGCCGCCGATGAACGGTTCGGGGTGTGGGGTGGACTCGACGCCGGTGAACGCCGGCGGAT 1760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 179165335303204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |