Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq276787 120 8e-23 >seq276787 Length=256 Score = 120 bits (132), Expect = 8e-23 Identities = 175/244 (72%), Gaps = 9/244 (4%) Strand=Plus/Plus Query 27316 CCGGCATCCGGCCACGTTCTGCACTTCATCGACTGGGCGAAGATCGAGCTGACCAAGGAC 27375 ||||| || | | ||| ||| || ||||||||||||| |||||| || || |||||| Sbjct 17 CCGGCCTCGGCCTTCGTGCTGAACCCGATCGACTGGGCGACGATCGAACTCACGAAGGAC 76 Query 27376 ACCCTGGGCCGCTACATCCTCGCCAACCCG--CTGGGCCTGGCCGGCCCGCTGCTGTGGG 27433 |||| ||||||||||||| ||| | ||||| | || | || | |||| ||||||| Sbjct 77 ACCCAGGGCCGCTACATCATCGGCGACCCGGCCGAGGGCGTGCAG--CCGCGGCTGTGGA 134 Query 27434 GCCTGCCGGTGGTTGCCACTGAAATCGCCGC-GTTCCAGGGCAAGTTCCTGACTGGTGCG 27492 |||||||||||| || || | | ||| | ||| | |||||| || || || Sbjct 135 ACCTGCCGGTGGTCGCGACCCA----GGCGCAGGCGCAGAACCGGTTCCTCACCGGAGCC 190 Query 27493 TTCCAGACCGGCGCGCAGATCTTCGATCGCGAAGACGCCAACGTGGTGATCTCCACCGAG 27552 ||| | | || |||||||||||||||||| || | | ||| || | || |||||| Sbjct 191 TTCGATATCGCGGCGCAGATCTTCGATCGCATGGAGATCGAGGTGTTGCTGTCGACCGAG 250 Query 27553 AACG 27556 |||| Sbjct 251 AACG 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133425133900718