Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_030932.1 Length=43505 Score E Sequences producing significant alignments: (Bits) Value seq22987 150 5e-32 seq50100 123 7e-24 >seq22987 Length=2059 Score = 150 bits (166), Expect = 5e-32 Identities = 124/151 (82%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23434 ACGGCGTCGAGATCGTCGTCGAAGAGATCGGCGTATGTGTCGAGCGTCATAGCGGCTGAC 23493 |||||||| ||||| |||||||| || || ||||| || ||||| ||||| || || ||| Sbjct 2018 ACGGCGTCCAGATCCTCGTCGAACAGGTCCGCGTAGGTATCGAGGGTCATCGCCGCCGAC 1959 Query 23494 GAGTGCCCGAGCATCCGTTGCACTGCCTTCACGTTCGCGCCCGCCGAGATCGCGAGGCTC 23553 | ||| ||||||||||| || || ||||||||||||||||||| |||||| || | Sbjct 1958 GCGTGACCGAGCATCCGCTGTACCGCCTTCACGTTCGCGCCCGAGCTGATCGCTAGCGAC 1899 Query 23554 GCGGCAGTGTGGCGCAAGTCGTGCGCGGTGA 23584 ||||| |||||||||| ||||||| |||||| Sbjct 1898 GCGGCCGTGTGGCGCAGGTCGTGCACGGTGA 1868 >seq50100 Length=1361 Score = 123 bits (136), Expect = 7e-24 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 23413 GCACGGTCGAGCGCGTCGGCTACGGCGTCGAGATCGTCGTCGAAGAGATCGGCGTATGTG 23472 || ||||| || ||| | || || || |||||||| ||| |||||| || || || ||| Sbjct 95 GCCCGGTCCAGAGCGGCCGCGACCGCTTCGAGATCATCGGGGAAGAGGTCTGCATAAGTG 154 Query 23473 TCGAGCGTCATAGCGGCTGACGAGTGCCCGAGCATCCGTTGCACTGCCTTCACGTTCGCG 23532 |||||||| | || || || ||| |||||||| || || ||||| ||||||||| Sbjct 155 TCGAGCGTGAGGGCCGCCGATTTGTGTCCGAGCATGGTCTGGACGGCCTTGACGTTCGCG 214 Query 23533 CCCGCCGAGATCGCGAGGCTCGCGGCAGTGTGGCGCAAGTCGTGCGCGGTGAC 23585 ||||||||||| ||||| || || ||||| |||| |||||||| ||||| Sbjct 215 CCCGCCGAGATAGCGAGCGAGGCAGCGGTGTGCCGCAGGTCGTGCGGAGTGAC 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138636729263082