Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031004.1
Length=41857
Score E
Sequences producing significant alignments: (Bits) Value
seq9721 223 9e-54
seq136124 118 3e-22
seq85588 95.1 3e-15
seq206999 91.5 4e-14
>seq9721
Length=2861
Score = 223 bits (246), Expect = 9e-54
Identities = 400/575 (70%), Gaps = 27/575 (5%)
Strand=Plus/Plus
Query 37761 TGAGAGGTATTCGATGGCGTGGGTCCGAGTAGGGGACACCTCCGCAATGCAACCGGAGCT 37820
|||| ||| | |||||||||||| ||| || |||| | | || ||||| ||| |
Sbjct 2233 TGAGTGGTTGTAGATGGCGTGGGTTCGATCTGGTGACAACGCGGCGATGCATCCGCGTGT 2292
Query 37821 GCTGTCCGTGCTCGAGCACCCCGAGTTCGACGACCGACTACTCAACGAGGTGTGGGGCTT 37880
|| || | | ||| ||| |||||||||||| || |||||||||| ||| ||
Sbjct 2293 CCTCGCCATCCACGAACACGAGCTGTTCGACGACCGCCTGGTCAACGAGGTCATGGGGTT 2352
Query 37881 CGTAGTCCGATGTGCCGCCCAATCCGGCCAGCACAAAACCGATTACGTCGTCTCGCGCGG 37940
| | |||| || || |||||||| |||| ||||||||||||||| |||||
Sbjct 2353 CTTCATCCGGTGCGCGCAGCAATCCGGTTCTCACAGCACCGATTACGTCGTCAATCGCGG 2412
Query 37941 CACCGCCACCATGATCGCAGGCTCGACTCGC--GTCGACGT-GTGCGTGTCGGTGGCCGT 37997
|||||| ||||||| | || |||| ||||| || ||| ||| ||||||| |
Sbjct 2413 CACCGCAGTTCTGATCGC--GAACGTTTCGCGGGTCGATGTCGTG-GTGGCGGTGGCGCT 2469
Query 37998 GTGGGCTGACCTGATGTCCGAGATCGAGGTCGATGGGAGATCCGTCTACAAGATCAAGGA 38057
|||||| | |||||| ||||| |||| |||| || | || ||||||| ||| ||
Sbjct 2470 GTGGGCGGGACTGATGACCGAGGTCGACATCGACGGCCGGGTCGGCTACAAGCTCATCGA 2529
Query 38058 CGACGACCCTGAGTTCATCCACCTTCGGCTGAAGGCCGAGATCGAGTGGGAGAACCAGAG 38117
||||||||| || ||| | || || || || |||||||||||||| |||||||| ||| |
Sbjct 2530 CGACGACCCCGATTTCCTGCATCTGCGTCTCAAGGCCGAGATCGACTGGGAGAAACAGCG 2589
Query 38118 AAAGCTCGACAACGCTCGACCGCAGTTGATCGTGCCAGTGCGTCTCCGAGATGGAGACGC 38177
| |||||||||||| || || | ||||||| || || || ||||| || || ||||
Sbjct 2590 CAGGCTCGACAACGCCCGCCCATCGCTGATCGTCCCGGTCCGACTCCGGGACGGCGACGG 2649
Query 38178 GTGCCG--CTGGTG--CGGGTGCATCGTCGATTGGTTTGATCGCAGGTCCGGGAGAGCCG 38233
||| || | ||| | || || || || || || ||||| ||
Sbjct 2650 GTGTCGGTATCGTGAACTGGACCA-CGAAGAACGG--TGGCCGCAG------------CG 2694
Query 38234 GCACCTACGACCACCTCGATCCCGGCGAGCCCGCCACGGTCGACACCTATGTGGTGTGTT 38293
||||||||||||||||| | | || | | ||| ||||| || | |||||||| |
Sbjct 2695 GCACCTACGACCACCTCCACGCAGGTGTCGCAGCCGAGGTCGCGACGTCGGTGGTGTGCT 2754
Query 38294 GCCGCAGCTGCAACAGCAGC-CGCGGAAACGGTGA 38327
||||| |||||| || | ||||| ||||| ||
Sbjct 2755 GCCGCTCGTGCAAC-TCATCGCGCGGTAACGGCGA 2788
>seq136124
Length=3505
Score = 118 bits (130), Expect = 3e-22
Identities = 228/331 (69%), Gaps = 4/331 (1%)
Strand=Plus/Plus
Query 12630 CGGGCGCCACTGCGCAGGAGATGGCGGCGATCTCGGACAAGGCCCGCCAGCTCGGCAACG 12689
|||| ||||| || | |||||| ||| ||||| || | ||| ||||| ||
Sbjct 258 CGGGTGCCACGGCAAAACAGATGGTCGCGGCCTCGGCCACCTCGCGCACCCTCGGGTCCG 317
Query 12690 ACATCGCGCTGCCCGCGACGTCGGCGGTCGACGCCGCGACCGCGATGCTCGAGCTGTCCA 12749
|| | | ||||| || ||||| | | ||||| || | ||| ||||||| | |
Sbjct 318 ACCTGACCCTGCCGGCCACGTCCGGTGCGGACGCGGCCAAGATCATGGTCGAGCTCGCGA 377
Query 12750 AGGGCGGGCTGACGGTGAAGGCGTCGATGGACGCTGCCCGCGGTTCCCTCGCGCTCGCCG 12809
|||| || ||||| || || ||||||| ||||| || | || ||||||||
Sbjct 378 AGGGTGGCCTGACCCTGCAGCAGTCGATGTCGGCTGCGAAGGGCACGATCCAGCTCGCCG 437
Query 12810 CCGCCGCGCAGATCGATGCGGGTAAGGCCGCGGAGATCCAGGCCAACGCCATCAACACCT 12869
| ||||||||| |||| | | | ||| || ||||||||||||||| | | ||| |
Sbjct 438 CGGCCGCGCAGGTCGACGGCGCCACGGCGGCCGAGATCCAGGCCAACTCGCTGAACCAGT 497
Query 12870 TCCGGCTGAAGGCGACCGACGCCGAGCAT-GTCGCCGACGTCCTCGCCAACACCGCGAAC 12928
|| || |||| | | | || |||| ||||||||||| ||||| ||||||||||||
Sbjct 498 TCTCCCTCTCAGCGAAC-AAGGCGGGCATGGTCGCCGACGTGCTCGCGAACACCGCGAAC 556
Query 12929 -AAGTCGTCGGCCGGAATGACCGACATCGCC 12958
| || ||| ||| ||||||||||||||
Sbjct 557 GCTGCCGCCGG-CGGCGTGACCGACATCGCC 586
>seq85588
Length=2357
Score = 95.1 bits (104), Expect = 3e-15
Identities = 194/282 (69%), Gaps = 10/282 (4%)
Strand=Plus/Minus
Query 33235 CAAGTACATCCTGATTGCCGGCCACCGGCGTCTCGCCGCAGCGAAGAAACTTCGGCTCAA 33294
||||||| | | | ||||||||||| || | ||||||||| ||| | |||||
Sbjct 1595 CAAGTACCGCATCGTCGCCGGCCACCGCCGCCACGCCGCAGCCAAGCAGGCGAAGCTCAC 1536
Query 33295 GACGGTGCCGTGCATCGTCGACACCGCGATCACCGACGAGGCCGACCAGATCGCCGCGAT 33354
||| ||||| | || ||||| || |||||||||||||||| |||| | |||
Sbjct 1535 CCGGGTTCCGTGTGTGATCCGCACCGACCTCGACGACGAGGCCGACCAGCTCGCGGTGAT 1476
Query 33355 GCTCGCGGAGAACATCGAGCGCCAGGACCTCACCGCCGTCGAGGAATCCGACGGTGTCGC 33414
| | || ||||||| |||| |||||| || | ||||||| | ||| ||| |
Sbjct 1475 GTTGGCCGAGAACACCGAGAAGGCGGACCTGACTCTCCTCGAGGAGGCGAACGCCGTC-C 1417
Query 33415 ACTG-CTCCTCGACCTCGGCTTGA--ATCAGAAGCAGATCGCGTCCCGCACTGGCATGAC 33471
| | |||||||| |||| | | ||| | || ||||||||||||| |||||| |
Sbjct 1416 AGGGCCTCCTCGAGCTCGACGGCACGATC--GTGAAGGTCGCGTCCCGCACGGGCATGGC 1359
Query 33472 CTCGCCACGG--GTCCGTAACCGCGTCAAGGTCGCCAAGCTC 33511
| | ||| ||||| | || || ||||| |||||||||
Sbjct 1358 CAAGAAGCGGGTGTCCG--AGCGGGTGAAGGTGGCCAAGCTC 1319
>seq206999
Length=303
Score = 91.5 bits (100), Expect = 4e-14
Identities = 207/306 (68%), Gaps = 14/306 (5%)
Strand=Plus/Minus
Query 19962 CCCGGTCTGGGCAACCTGTACCAGGGGCAGCTCGACAACACGGTGCTGGCGTTCGCGAAG 20021
|| ||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||||
Sbjct 299 CCTGGTCTGGACAACCTGTATCAGGGTCAGCTCGACAACACGACGTTGGCGTTCGCGATC 240
Query 20022 GTCGAGGACCGGCCCCGCGCGCGCAAGGCTGGCCGTTTCGGTCTGCGGCACGTGTGGTGC 20081
|| ||||| | ||||||||| || ||||| ||| | | | ||| ||||
Sbjct 239 ATCACCGACCGCCGTCGCGCGCGCCGCGCCGGCCGGTTC-GCGTTCCACAC----CGTGC 185
Query 20082 AGCGAGGGCGCCACG------GGGTTCGGCATCTCGACCGGCCTCGCGCTGCGGCAGGGC 20135
|| ||| || || |||||||| | ||||| | | ||| ||||| ||
Sbjct 184 AG-GAGTCCGGGTCGGGTATCGGGTTCGGTGTGTCGACGGCATTGGCGTTGCGGGCGGCG 126
Query 20136 TGGTACCTGTCGCGGCCGCACCTCGTGCGGCAGGCCGAGGTGCTCGACGGGTTCCCGTAC 20195
| |||| |||||| |||||| | |||| ||| || |||| |||| ||
Sbjct 125 TCGTACAAGTCGCGACCGCACACCACCAACCAGGTCGAAGTCGCCGACAACGCCCCGCAC 66
Query 20196 CTGATCGGCCGGCACATCCGC-CGCGGCTCGTGGTGCGTGTTCGAGATGCCCGACGAGTC 20254
| |||||| | ||||| | | || || |||||||||||||||||||| ||
Sbjct 65 CAGATCGGGACGACGGTCCGCAAGGGTGTCCGCGT-CGTGTTCGAGATGCCCGACGGCTC 7
Query 20255 GCTGTA 20260
||||||
Sbjct 6 GCTGTA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133380481308874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |