Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031004.1 Length=41857 Score E Sequences producing significant alignments: (Bits) Value seq9721 223 9e-54 seq136124 118 3e-22 seq85588 95.1 3e-15 seq206999 91.5 4e-14 >seq9721 Length=2861 Score = 223 bits (246), Expect = 9e-54 Identities = 400/575 (70%), Gaps = 27/575 (5%) Strand=Plus/Plus Query 37761 TGAGAGGTATTCGATGGCGTGGGTCCGAGTAGGGGACACCTCCGCAATGCAACCGGAGCT 37820 |||| ||| | |||||||||||| ||| || |||| | | || ||||| ||| | Sbjct 2233 TGAGTGGTTGTAGATGGCGTGGGTTCGATCTGGTGACAACGCGGCGATGCATCCGCGTGT 2292 Query 37821 GCTGTCCGTGCTCGAGCACCCCGAGTTCGACGACCGACTACTCAACGAGGTGTGGGGCTT 37880 || || | | ||| ||| |||||||||||| || |||||||||| ||| || Sbjct 2293 CCTCGCCATCCACGAACACGAGCTGTTCGACGACCGCCTGGTCAACGAGGTCATGGGGTT 2352 Query 37881 CGTAGTCCGATGTGCCGCCCAATCCGGCCAGCACAAAACCGATTACGTCGTCTCGCGCGG 37940 | | |||| || || |||||||| |||| ||||||||||||||| ||||| Sbjct 2353 CTTCATCCGGTGCGCGCAGCAATCCGGTTCTCACAGCACCGATTACGTCGTCAATCGCGG 2412 Query 37941 CACCGCCACCATGATCGCAGGCTCGACTCGC--GTCGACGT-GTGCGTGTCGGTGGCCGT 37997 |||||| ||||||| | || |||| ||||| || ||| ||| ||||||| | Sbjct 2413 CACCGCAGTTCTGATCGC--GAACGTTTCGCGGGTCGATGTCGTG-GTGGCGGTGGCGCT 2469 Query 37998 GTGGGCTGACCTGATGTCCGAGATCGAGGTCGATGGGAGATCCGTCTACAAGATCAAGGA 38057 |||||| | |||||| ||||| |||| |||| || | || ||||||| ||| || Sbjct 2470 GTGGGCGGGACTGATGACCGAGGTCGACATCGACGGCCGGGTCGGCTACAAGCTCATCGA 2529 Query 38058 CGACGACCCTGAGTTCATCCACCTTCGGCTGAAGGCCGAGATCGAGTGGGAGAACCAGAG 38117 ||||||||| || ||| | || || || || |||||||||||||| |||||||| ||| | Sbjct 2530 CGACGACCCCGATTTCCTGCATCTGCGTCTCAAGGCCGAGATCGACTGGGAGAAACAGCG 2589 Query 38118 AAAGCTCGACAACGCTCGACCGCAGTTGATCGTGCCAGTGCGTCTCCGAGATGGAGACGC 38177 | |||||||||||| || || | ||||||| || || || ||||| || || |||| Sbjct 2590 CAGGCTCGACAACGCCCGCCCATCGCTGATCGTCCCGGTCCGACTCCGGGACGGCGACGG 2649 Query 38178 GTGCCG--CTGGTG--CGGGTGCATCGTCGATTGGTTTGATCGCAGGTCCGGGAGAGCCG 38233 ||| || | ||| | || || || || || || ||||| || Sbjct 2650 GTGTCGGTATCGTGAACTGGACCA-CGAAGAACGG--TGGCCGCAG------------CG 2694 Query 38234 GCACCTACGACCACCTCGATCCCGGCGAGCCCGCCACGGTCGACACCTATGTGGTGTGTT 38293 ||||||||||||||||| | | || | | ||| ||||| || | |||||||| | Sbjct 2695 GCACCTACGACCACCTCCACGCAGGTGTCGCAGCCGAGGTCGCGACGTCGGTGGTGTGCT 2754 Query 38294 GCCGCAGCTGCAACAGCAGC-CGCGGAAACGGTGA 38327 ||||| |||||| || | ||||| ||||| || Sbjct 2755 GCCGCTCGTGCAAC-TCATCGCGCGGTAACGGCGA 2788 >seq136124 Length=3505 Score = 118 bits (130), Expect = 3e-22 Identities = 228/331 (69%), Gaps = 4/331 (1%) Strand=Plus/Plus Query 12630 CGGGCGCCACTGCGCAGGAGATGGCGGCGATCTCGGACAAGGCCCGCCAGCTCGGCAACG 12689 |||| ||||| || | |||||| ||| ||||| || | ||| ||||| || Sbjct 258 CGGGTGCCACGGCAAAACAGATGGTCGCGGCCTCGGCCACCTCGCGCACCCTCGGGTCCG 317 Query 12690 ACATCGCGCTGCCCGCGACGTCGGCGGTCGACGCCGCGACCGCGATGCTCGAGCTGTCCA 12749 || | | ||||| || ||||| | | ||||| || | ||| ||||||| | | Sbjct 318 ACCTGACCCTGCCGGCCACGTCCGGTGCGGACGCGGCCAAGATCATGGTCGAGCTCGCGA 377 Query 12750 AGGGCGGGCTGACGGTGAAGGCGTCGATGGACGCTGCCCGCGGTTCCCTCGCGCTCGCCG 12809 |||| || ||||| || || ||||||| ||||| || | || |||||||| Sbjct 378 AGGGTGGCCTGACCCTGCAGCAGTCGATGTCGGCTGCGAAGGGCACGATCCAGCTCGCCG 437 Query 12810 CCGCCGCGCAGATCGATGCGGGTAAGGCCGCGGAGATCCAGGCCAACGCCATCAACACCT 12869 | ||||||||| |||| | | | ||| || ||||||||||||||| | | ||| | Sbjct 438 CGGCCGCGCAGGTCGACGGCGCCACGGCGGCCGAGATCCAGGCCAACTCGCTGAACCAGT 497 Query 12870 TCCGGCTGAAGGCGACCGACGCCGAGCAT-GTCGCCGACGTCCTCGCCAACACCGCGAAC 12928 || || |||| | | | || |||| ||||||||||| ||||| |||||||||||| Sbjct 498 TCTCCCTCTCAGCGAAC-AAGGCGGGCATGGTCGCCGACGTGCTCGCGAACACCGCGAAC 556 Query 12929 -AAGTCGTCGGCCGGAATGACCGACATCGCC 12958 | || ||| ||| |||||||||||||| Sbjct 557 GCTGCCGCCGG-CGGCGTGACCGACATCGCC 586 >seq85588 Length=2357 Score = 95.1 bits (104), Expect = 3e-15 Identities = 194/282 (69%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 33235 CAAGTACATCCTGATTGCCGGCCACCGGCGTCTCGCCGCAGCGAAGAAACTTCGGCTCAA 33294 ||||||| | | | ||||||||||| || | ||||||||| ||| | ||||| Sbjct 1595 CAAGTACCGCATCGTCGCCGGCCACCGCCGCCACGCCGCAGCCAAGCAGGCGAAGCTCAC 1536 Query 33295 GACGGTGCCGTGCATCGTCGACACCGCGATCACCGACGAGGCCGACCAGATCGCCGCGAT 33354 ||| ||||| | || ||||| || |||||||||||||||| |||| | ||| Sbjct 1535 CCGGGTTCCGTGTGTGATCCGCACCGACCTCGACGACGAGGCCGACCAGCTCGCGGTGAT 1476 Query 33355 GCTCGCGGAGAACATCGAGCGCCAGGACCTCACCGCCGTCGAGGAATCCGACGGTGTCGC 33414 | | || ||||||| |||| |||||| || | ||||||| | ||| ||| | Sbjct 1475 GTTGGCCGAGAACACCGAGAAGGCGGACCTGACTCTCCTCGAGGAGGCGAACGCCGTC-C 1417 Query 33415 ACTG-CTCCTCGACCTCGGCTTGA--ATCAGAAGCAGATCGCGTCCCGCACTGGCATGAC 33471 | | |||||||| |||| | | ||| | || ||||||||||||| |||||| | Sbjct 1416 AGGGCCTCCTCGAGCTCGACGGCACGATC--GTGAAGGTCGCGTCCCGCACGGGCATGGC 1359 Query 33472 CTCGCCACGG--GTCCGTAACCGCGTCAAGGTCGCCAAGCTC 33511 | | ||| ||||| | || || ||||| ||||||||| Sbjct 1358 CAAGAAGCGGGTGTCCG--AGCGGGTGAAGGTGGCCAAGCTC 1319 >seq206999 Length=303 Score = 91.5 bits (100), Expect = 4e-14 Identities = 207/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 19962 CCCGGTCTGGGCAACCTGTACCAGGGGCAGCTCGACAACACGGTGCTGGCGTTCGCGAAG 20021 || ||||||| ||||||||| ||||| ||||||||||||||| | |||||||||||| Sbjct 299 CCTGGTCTGGACAACCTGTATCAGGGTCAGCTCGACAACACGACGTTGGCGTTCGCGATC 240 Query 20022 GTCGAGGACCGGCCCCGCGCGCGCAAGGCTGGCCGTTTCGGTCTGCGGCACGTGTGGTGC 20081 || ||||| | ||||||||| || ||||| ||| | | | ||| |||| Sbjct 239 ATCACCGACCGCCGTCGCGCGCGCCGCGCCGGCCGGTTC-GCGTTCCACAC----CGTGC 185 Query 20082 AGCGAGGGCGCCACG------GGGTTCGGCATCTCGACCGGCCTCGCGCTGCGGCAGGGC 20135 || ||| || || |||||||| | ||||| | | ||| ||||| || Sbjct 184 AG-GAGTCCGGGTCGGGTATCGGGTTCGGTGTGTCGACGGCATTGGCGTTGCGGGCGGCG 126 Query 20136 TGGTACCTGTCGCGGCCGCACCTCGTGCGGCAGGCCGAGGTGCTCGACGGGTTCCCGTAC 20195 | |||| |||||| |||||| | |||| ||| || |||| |||| || Sbjct 125 TCGTACAAGTCGCGACCGCACACCACCAACCAGGTCGAAGTCGCCGACAACGCCCCGCAC 66 Query 20196 CTGATCGGCCGGCACATCCGC-CGCGGCTCGTGGTGCGTGTTCGAGATGCCCGACGAGTC 20254 | |||||| | ||||| | | || || |||||||||||||||||||| || Sbjct 65 CAGATCGGGACGACGGTCCGCAAGGGTGTCCGCGT-CGTGTTCGAGATGCCCGACGGCTC 7 Query 20255 GCTGTA 20260 |||||| Sbjct 6 GCTGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133380481308874