Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq243462 145 1e-29 seq263246 131 3e-25 seq270463 111 2e-19 seq259185 104 4e-17 seq76033 89.7 8e-13 seq45463 86.0 1e-11 >seq243462 Length=264 Score = 145 bits (160), Expect = 1e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 || || ||||| |||||||| | | |||||||| |||||||||||| |||||| | Sbjct 198 GATCGCACCGGTACCGGCACCAGGAGCGTGTTCGGGCACCAGATGCGGTTCGACCTGTCG 139 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || || ||||| ||||| |||||||| ||||| ||||| || || | || ||||||| Sbjct 138 GAGGGGTTCCCGCTGGTCACCACGAAGAAGGTGCACCTGCGGTCGGTGATCGTCGAGCTG 79 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 |||||||||||| || || |||||| || | | ||| | || ||| || || ||| Sbjct 78 CTGTGGTTCCTGCGCGGCGAGACCAACGTCCGCTGGCTGCAGGAGCGCGGCGTGACGATC 19 Query 202729 TGGGACGAATGGGCG 202743 ||||||||||||||| Sbjct 18 TGGGACGAATGGGCG 4 >seq263246 Length=351 Score = 131 bits (144), Expect = 3e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 202492 ATGCGCCAGTATCTCCAACTGATGGAATCCGTCCTCTCATTCGGTCATGAAAAGAAAGAC 202551 |||||||| ||||| | || ||||| ||| ||||| ||| || | || ||| Sbjct 128 ATGCGCCAATATCTAGACCTCATGGACCGCGTGCTCTCGACCGGCGTCGAGACGATGGAC 187 Query 202552 CGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACCGAA 202611 || || ||||||||||||| | | ||||||| || ||||||||||| || || | | Sbjct 188 CGCACAGGCACCGGCACGCTCAGCGTGTTCGGCGCGCAGATGCGGTTCGATCTCGCGCAG 247 Query 202612 GGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCTG 202671 |||||||| || | ||||| || ||| | |||||||| || ||||| ||| |||||| Sbjct 248 GGCTTCCCCGTGCTCACCACCAAGAAGCTCCACCTCCGCTCGATCATCATCGAACTGCTG 307 Query 202672 TGGTTCCTGAAAGGGGACACCAACATC 202698 ||||||||| || ||||||||| || Sbjct 308 TGGTTCCTGCGCGGCGACACCAACGTC 334 >seq270463 Length=280 Score = 111 bits (122), Expect = 2e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| ||||||||||| || ||| | | |||||| |||| | |||| ||||| || Sbjct 82 GACCGCACCGGCACCGGGACCCGCAGCGTCTTCGGGCGCCAGCTCCGGTACGACCTCTCC 141 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || || ||||| ||| | ||||| || ||| || ||| || ||| | |||||||| Sbjct 142 GAGGGTTTCCCGCTGATCACCACCAAGCGGGTGCATCTCAAGTCGATCGTCTACGAGCTG 201 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACAT-CAGTTACCTGAACGATAACGGGGTCACTAT 202727 || |||||||| || ||| | ||| | ||| | ||| | ||| |||| ||||| || Sbjct 202 CTCTGGTTCCTCCGTGGCGACTCGAACGTGCAG-TGGCTGCAGGATCACGGCGTCACCAT 260 Query 202728 CTGGGACGAATGGGC 202742 ||||||||| ||||| Sbjct 261 CTGGGACGAGTGGGC 275 >seq259185 Length=438 Score = 104 bits (114), Expect = 4e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| |||||||| ||||| ||| | | |||||| ||||||||| || ||||| Sbjct 160 GACCGCACCGGCACGGGCACCCGCAGCGTCTTCGGGCACCAGATGCGCTTCGACCTCGAG 219 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 | |||||||| |||||||||||||| | | ||| |||| || ||| | ||||| || Sbjct 220 GCCGGCTTCCCGCTGGTGACCACGAAGCGGCTCCACGTCCGCTCGATCGTGCACGAATTG 279 Query 202669 CTGTGGTTCCTG 202680 |||||||||||| Sbjct 280 CTGTGGTTCCTG 291 >seq76033 Length=7108 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || || || ||| | ||||||||||| ||||| | ||| | || |||||||| |||||| Sbjct 6367 CTCTCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATC 6426 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 || || ||||| | || || | ||| | || ||||| | | | | || || ||| Sbjct 6427 GCGTCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAG 6486 Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467 ||||| ||||| ||||| || |||||| || |||||| | || |||| | Sbjct 6487 TTCGTGTGGACCGGCGGGGACTGCCACATC--TACGACAACCACGTCGACCAGGTGAGAT 6544 Query 203468 TGCAGTTAACTCGTGACCCGCACCCAT 203494 ||||| | | ||||||||| |||||| Sbjct 6545 TGCAGCTCTCGCGTGACCCGTACCCAT 6571 >seq45463 Length=2920 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 2709 CTGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCC 2768 ||||||| ||| |||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct 2512 CTGTAGCGCAGTTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 2453 Query 2769 GTCAG 2773 ||||| Sbjct 2452 GTCAG 2448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785589624118000