Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
seq243462 145 1e-29
seq263246 131 3e-25
seq270463 111 2e-19
seq259185 104 4e-17
seq76033 89.7 8e-13
seq45463 86.0 1e-11
>seq243462
Length=264
Score = 145 bits (160), Expect = 1e-29
Identities = 149/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608
|| || ||||| |||||||| | | |||||||| |||||||||||| |||||| |
Sbjct 198 GATCGCACCGGTACCGGCACCAGGAGCGTGTTCGGGCACCAGATGCGGTTCGACCTGTCG 139
Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668
|| || ||||| ||||| |||||||| ||||| ||||| || || | || |||||||
Sbjct 138 GAGGGGTTCCCGCTGGTCACCACGAAGAAGGTGCACCTGCGGTCGGTGATCGTCGAGCTG 79
Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728
|||||||||||| || || |||||| || | | ||| | || ||| || || |||
Sbjct 78 CTGTGGTTCCTGCGCGGCGAGACCAACGTCCGCTGGCTGCAGGAGCGCGGCGTGACGATC 19
Query 202729 TGGGACGAATGGGCG 202743
|||||||||||||||
Sbjct 18 TGGGACGAATGGGCG 4
>seq263246
Length=351
Score = 131 bits (144), Expect = 3e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 202492 ATGCGCCAGTATCTCCAACTGATGGAATCCGTCCTCTCATTCGGTCATGAAAAGAAAGAC 202551
|||||||| ||||| | || ||||| ||| ||||| ||| || | || |||
Sbjct 128 ATGCGCCAATATCTAGACCTCATGGACCGCGTGCTCTCGACCGGCGTCGAGACGATGGAC 187
Query 202552 CGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACCGAA 202611
|| || ||||||||||||| | | ||||||| || ||||||||||| || || | |
Sbjct 188 CGCACAGGCACCGGCACGCTCAGCGTGTTCGGCGCGCAGATGCGGTTCGATCTCGCGCAG 247
Query 202612 GGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCTG 202671
|||||||| || | ||||| || ||| | |||||||| || ||||| ||| ||||||
Sbjct 248 GGCTTCCCCGTGCTCACCACCAAGAAGCTCCACCTCCGCTCGATCATCATCGAACTGCTG 307
Query 202672 TGGTTCCTGAAAGGGGACACCAACATC 202698
||||||||| || ||||||||| ||
Sbjct 308 TGGTTCCTGCGCGGCGACACCAACGTC 334
>seq270463
Length=280
Score = 111 bits (122), Expect = 2e-19
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608
||||| ||||||||||| || ||| | | |||||| |||| | |||| ||||| ||
Sbjct 82 GACCGCACCGGCACCGGGACCCGCAGCGTCTTCGGGCGCCAGCTCCGGTACGACCTCTCC 141
Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668
|| || ||||| ||| | ||||| || ||| || ||| || ||| | ||||||||
Sbjct 142 GAGGGTTTCCCGCTGATCACCACCAAGCGGGTGCATCTCAAGTCGATCGTCTACGAGCTG 201
Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACAT-CAGTTACCTGAACGATAACGGGGTCACTAT 202727
|| |||||||| || ||| | ||| | ||| | ||| | ||| |||| ||||| ||
Sbjct 202 CTCTGGTTCCTCCGTGGCGACTCGAACGTGCAG-TGGCTGCAGGATCACGGCGTCACCAT 260
Query 202728 CTGGGACGAATGGGC 202742
||||||||| |||||
Sbjct 261 CTGGGACGAGTGGGC 275
>seq259185
Length=438
Score = 104 bits (114), Expect = 4e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608
||||| |||||||| ||||| ||| | | |||||| ||||||||| || |||||
Sbjct 160 GACCGCACCGGCACGGGCACCCGCAGCGTCTTCGGGCACCAGATGCGCTTCGACCTCGAG 219
Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668
| |||||||| |||||||||||||| | | ||| |||| || ||| | ||||| ||
Sbjct 220 GCCGGCTTCCCGCTGGTGACCACGAAGCGGCTCCACGTCCGCTCGATCGTGCACGAATTG 279
Query 202669 CTGTGGTTCCTG 202680
||||||||||||
Sbjct 280 CTGTGGTTCCTG 291
>seq76033
Length=7108
Score = 89.7 bits (98), Expect = 8e-13
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349
|| || || ||| | ||||||||||| ||||| | ||| | || |||||||| ||||||
Sbjct 6367 CTCTCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATC 6426
Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409
|| || ||||| | || || | ||| | || ||||| | | | | || || |||
Sbjct 6427 GCGTCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAG 6486
Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467
||||| ||||| ||||| || |||||| || |||||| | || |||| |
Sbjct 6487 TTCGTGTGGACCGGCGGGGACTGCCACATC--TACGACAACCACGTCGACCAGGTGAGAT 6544
Query 203468 TGCAGTTAACTCGTGACCCGCACCCAT 203494
||||| | | ||||||||| ||||||
Sbjct 6545 TGCAGCTCTCGCGTGACCCGTACCCAT 6571
>seq45463
Length=2920
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 2709 CTGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCC 2768
||||||| ||| |||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct 2512 CTGTAGCGCAGTTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 2453
Query 2769 GTCAG 2773
|||||
Sbjct 2452 GTCAG 2448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785589624118000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |