Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031028.1
Length=45285
Score E
Sequences producing significant alignments: (Bits) Value
seq138558 322 1e-83
seq204283 165 2e-36
seq139601 152 1e-32
>seq138558
Length=816
Score = 322 bits (356), Expect = 1e-83
Identities = 546/780 (70%), Gaps = 11/780 (1%)
Strand=Plus/Plus
Query 20492 GGTCCTCCCGGACCGCCCGGAGCAGTGCACCAGGGCGACCGGACCTCGGCGCAGCTCACC 20551
||||| | || |||||||| || | ||||||||||| || ||| | |||||||||||
Sbjct 1 GGTCCCGCGGGCCCGCCCGGTGCGATCCACCAGGGCGAGCGCACCACCGCGCAGCTCACG 60
Query 20552 GCGCTGCAGGGGGTCCTGGGTCCGGAGCAGGTGAACTACTCCTACCGCAACACCGACACC 20611
|||||| | || |||| | |||| ||||| | | ||||||||||||||||
Sbjct 61 GCGCTGGCCGCGGCGTTGGGCAAGACGCAGACGAACTGGGCGTTCCGCAACACCGACACC 120
Query 20612 AACGACCAGTACGTCTGGGACGGGGAGTCGTTCGTGGTCTACCAGGACGTCTACCAGACT 20671
|||||||||||||| ||| ||| || |||||||| |||| || | ||| ||| ||
Sbjct 121 AACGACCAGTACGTGTGGAGCGGTGACGCGTTCGTGATCTATCACGGCGTGTACGGCACC 180
Query 20672 CCTGGCCCTCCGGGACCTGCACCAAACCTTTCTGCCGGCACCCTGACCGTGGGCGGCGAG 20731
|| || || || || || || || | | | |||||||| || || | ||| | |
Sbjct 181 CCGGGTCCGGTCGGTCCGGCGCCGAAGATGACGCCGGGCACCCTCACTGTCGACGGTGCG 240
Query 20732 CAGGTCGTAGACCCGGACTTCGGGGTGCGGGTGACCGGCACCAACCCGAACTACGTGGTC 20791
||||| |||||| ||||| |||||||| ||||| |||| | ||| ||||
Sbjct 241 ACGGTCGCTGACCCG---TTCGGTGTGCGGGTCTCCGGCGACAACGGCCAGTACTCGGTC 297
Query 20792 GACGTGGACCTGCCGCAGTTGCCCAAGGGCGACAAGGGCGACGTTGGTCCTTCGGGCTCG 20851
| |||||||| |||| || | |||||||||||||| ||| ||||| ||||| ||
Sbjct 298 GGGGTGGACCTCCCGCCGTCCCGTAAGGGCGACAAGGGTGACCAGGGTCCATCGGGGCCG 357
Query 20852 GTCTACACCTCGGTGGACGTGGACCAGACGGTGGCCCCGAACGACGGCGACGTCCTGGTA 20911
||| ||||||||| ||||| ||||||| || || |||||||||||| || | |
Sbjct 358 TTCTTCACCTCGGTCGACGTCGACCAGAACGTCGCGAAGAACGACGGCGATGTGTTCATC 417
Query 20912 CACGACGCGGACG-CGGGCAAGCT-CGTCTGGTCTCCCGGCCAGTTCGTGACCGAAGAGT 20969
||||||| ||| |||| ||| | || | | | || ||| || | | ||| ||||
Sbjct 418 TACGACGC-CACGTCGGGGAAGATGCGGCCTG-CGCCGGGCGGGTACTGGCTCGAGGAGT 475
Query 20970 ACGTGGTGCCTCCTTCTGGCTTCCCGAACGCCAGCAAGAGTTCCTCGGACCTGCGCCACC 21029
| || || | || || |||||||||| |||| | | ||| || |||
Sbjct 476 ATGTCGTTGCGCCCGACGGGTTCCCGAACGTGTCCAAGGGCCAGACCGACACCCGACACA 535
Query 21030 TGCTGGTCACTTTGCTGATCCCCGCCAAGCCGTACCGCTACCGCTTCGACTTCTCGGGCG 21089
|| |||| | | |||||| || ||| ||| || ||||| ||||||||| | ||||
Sbjct 536 CCATGTTCACCGTCCAGATCCCGGCGAAGACGTTCCCGTACCGGTTCGACTTCACCGGCG 595
Query 21090 GTGTAGACGTCGAGTCCAAGTCCGGACACCA-GATCGACCTGGAGGTCCGGTCGAACCTG 21148
|||| |||||| || | || ||| || | |||||| ||||| |||| | ||| |
Sbjct 596 GTGTCGACGTCTCGT-CGAGCGCGGGAACGATCATCGACATGGAGATCCGCACCAACATC 654
Query 21149 GACACCCCGACGTCCCCCGAAACCAACGGTCCGCTGGTCGGTTACGGCAAGGGCCAGGAC 21208
| || | | || || | | ||| || ||||| || ||||||||||||||||||
Sbjct 655 GGTGCCGGGTCCGAGCCGGAGAAGACCGGCCCACTGGTGGGGTACGGCAAGGGCCAGGAC 714
Query 21209 GGCGAGGGTTGGCGTGAGGTGGCCTTCCGCGCGCACTCCGACG-TGGCGATCGACCCCTC 21267
|| ||||| | || ||||| || ||||||||||||| ||||| ||||| ||||||||
Sbjct 715 GGTGAGGGGTTCCGAGAGGTCGCGTTCCGCGCGCACT-CGACGACCGCGATTGACCCCTC 773
>seq204283
Length=732
Score = 165 bits (182), Expect = 2e-36
Identities = 238/336 (71%), Gaps = 0/336 (0%)
Strand=Plus/Plus
Query 15319 CTACACCACCGGGCAGTACTCTCCGGTACCCTCCTTTGAACAGACGACGCACGTCGGACT 15378
|||||||||||| | ||||| ||||| || || ||||| || |||||||| ||
Sbjct 94 CTACACCACCGGCGACTACTCCCCGGTTCCGGAGTTCTCCCAGACCACCCACGTCGGTCT 153
Query 15379 GGCCTCGCGGGTGACTGCCGGAGGCAAGTCGCCGGAGTGGGTGAACACCCTGCTGGTCAC 15438
||| || ||| | || || || ||||| || || || ||| ||||||| ||||| |
Sbjct 154 GGCTTCCCGGATTACCGCTGGCGGCAAATCACCCGAATGGCTGAACACGGCCCTGGTTTC 213
Query 15439 CGGAGCCAACCTGGCGATCGGCCTGCTGGGAACCGCGATCGGCGTACCTGGTCTGCAACT 15498
|| ||||||| | | ||||| || || | ||||||||| || || |||||| ||
Sbjct 214 GGGGAGCAACCTGTTGCTAGGCCTCCTCGGCAGCGCGATCGGTGTGCCGGGTCTGGTGCT 273
Query 15499 GGGGGTCTTCGAGAACGCGGTCAAGAACAAGGTACTCGCGTTCCACTCGAGTGAAGACCG 15558
||| ||||||| |||| ||| ||||||||| | || | | |||||| || |||
Sbjct 274 CGGGATCTTCGACAACGTGGTGAAGAACAAGCTGTTCCCCTACCACTCCGCGGAGAACCT 333
Query 15559 CCAGCGCGCTACCGAGGCTGGGCCGTGGCGGTTCCGCGAGACTTTCGCCGAGACCTCCTC 15618
||||| || | || || |||| |||||||||| ||| ||||||||| | || |
Sbjct 334 GCAGCGAGCGAACGCCGCGGGGCGGTGGCGGTTCAAGGAGGACTTCGCCGAGTCGGCCAC 393
Query 15619 GACCGGTCTCTCGCTGACCACGTTCGCCGGGATGAA 15654
||||||| | |||| ||||||| | | |||||
Sbjct 394 GACCGGTTTGAACCTGAACACGTTCTCTGCCATGAA 429
>seq139601
Length=1978
Score = 152 bits (168), Expect = 1e-32
Identities = 518/791 (65%), Gaps = 26/791 (3%)
Strand=Plus/Minus
Query 14367 AGGCTTTCGCCCAGCTCACCTTTGACGAGAAGGACGAGCGCGACCTGCTGGCCCACCCGA 14426
|||| | |||| | || ||| | |||||| |||||| ||| | | ||| |||||
Sbjct 781 AGGCCTACGCCGACCTGACCGTCGACGAGCGCGACGAGTTCGAGGAGTTCGCCAACCCGC 722
Query 14427 AGGCGGAGCTGCAGCTACGCGACAAGGACAACCGGCTGTGGGGCCTGTCCGGCGACTACC 14486
||| | || |||| || |||||| | | ||||| | || ||||||||||
Sbjct 721 GCGCGTACATGGAGCTGCGGACCAAGGAGATGGCGGTGTGGTCGCCGTGTGGCGACTACC 662
Query 14487 GGGAGCTGAAGTTCACCGAGAAGGAGAACGAACCCGGTTCGATCACCTTCACTG-TCCCG 14545
||| |||||| | ||| ||| | | ||||| |||| | ||| |||||
Sbjct 661 AGGACATGAAGTGGAACGACAAGCGTTCCCAGCCCGGCGGTTTCACTGTT-CTGCTCCCG 603
Query 14546 GACGACGAGTACTACCGCGAGTACTTCTACGGGTT-CCCGAA-AGGCCAGGCTCGGCCGG 14603
|||||| | |||| | ||||||||| |||| ||||| ||||| | || |||
Sbjct 602 GACGACTCGCACTATCAGGAGTACTTCGACGGCCAACCCGACGAGGCC--GTCCGTCCGA 545
Query 14604 TGGTGGTGCAGCTGCCTTTC---TACCGCACCTTGTGGTTGATCACCGACTTCAAGCGCA 14660
| ||| | | | |||| | ||| || |||||||| ||||| | |||| | |
Sbjct 544 TCGTGATCCGGATGCCCGGCGAGTACACGACGTTGTGGTTCATCACGAAGTTCACTAGGA 485
Query 14661 AGCGCGAGGGCCTGAAGCGGGTGATCGAGGTCTC--CGGTGTGCACTGCCTGGAGTACCT 14718
||| ||||||| | | | | ||||||| |||| || | || ||| | ||
Sbjct 484 CCCGCAAGGGCCTCAGGAAGTTCTACGAGGTCGAGGCGGTCGGCGCG--CTCGAGCAGCT 427
Query 14719 GAACTGGGTCCACCTGTGGCCCTGTCCCTGGTTCCCG---GCCGAGTTCCAGCCGCTGCA 14775
| || ||| |||||||| || ||||| || ||||||||||| || | |
Sbjct 426 GTCCTATATCCGGCTGTGGCCGTG---CTGGTGGTCGATCGCCGAGTTCCAACCCATTGA 370
Query 14776 CTACTGGTTCGCAGTCGGACCGGCCGCGACCAACCTCGCCGCAGCCCTGATGGCTAACCT 14835
| | ||||| ||||||||| |||| | | | |||| | ||| | |||||
Sbjct 369 GTTCGACTTCGCGCTCGGACCGGTCGCGTCGATCTGCGCCAACTCGTTGACCGGCAACCT 310
Query 14836 CGTTCGCCTCCAGGGCGAGCTGTTCTCGATCCCCTCTGGTAACCTGCTGGA-CCTGAACA 14894
| || || |||| ||||||||||||||| | || |||||||| | ||||| |
Sbjct 309 GATCCGTCTGCAGGCGCCGCTGTTCTCGATCCCGACCGGGAACCTGCTCAAGCCTGAG-A 251
Query 14895 ACTGGAACGTGGTTAAGAAGGCTCTCTACCCGTTGGTGGTGAACCCGCGAAACAAGCTGG 14954
| ||| | || || || ||| ||||| | ||||||||||||| |||||| | |
Sbjct 250 CGTACAACTTCGTGCGCAACGCGCTCGACCCGATCATGGTGAACCCGCGCAACAAGTTCG 191
Query 14955 TCAAGGACACCTCAACCTGGATCACCGCCTCCTGGCGCATGGACAAGTGCCTGGACGCGT 15014
|| |||||| | | ||| | | ||| ||||| ||||||||| || |||||||
Sbjct 190 TCGGCGACACCACGAAATGGGACTCGGCCGCCTGGAAGATGGACAAGGCGCTCGACGCGT 131
Query 15015 TCAAGGAGGTCTGCGACACTGAGGGCCTGACGATCACC-ACCACCTTCTTCGACCCCGAC 15073
|||| ||| |||| | | | | || ||||||| |||| |||||||||||||||
Sbjct 130 TCAACGAGATCTGTCTGCCCAACGACGTGCAGATCACCTACCA-GTTCTTCGACCCCGAC 72
Query 15074 GCGGGCGACCCGCAGCCTTTCCCGGAGTACTTGGTGCTGAACCGGCCGACCCTGGTCGTA 15133
| ||||||||| || ||||| |||| | || || || |||| || ||||
Sbjct 71 ---GTCGACCCGCAACCGTTCCCCGAGTTCCTGCACCTCGACTCGCCGCGGATGATCGTC 15
Query 15134 GACTTTGTTGA 15144
||||| || ||
Sbjct 14 GACTTCGTCGA 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144313987368962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |