Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031028.1 Length=45285 Score E Sequences producing significant alignments: (Bits) Value seq138558 322 1e-83 seq204283 165 2e-36 seq139601 152 1e-32 >seq138558 Length=816 Score = 322 bits (356), Expect = 1e-83 Identities = 546/780 (70%), Gaps = 11/780 (1%) Strand=Plus/Plus Query 20492 GGTCCTCCCGGACCGCCCGGAGCAGTGCACCAGGGCGACCGGACCTCGGCGCAGCTCACC 20551 ||||| | || |||||||| || | ||||||||||| || ||| | ||||||||||| Sbjct 1 GGTCCCGCGGGCCCGCCCGGTGCGATCCACCAGGGCGAGCGCACCACCGCGCAGCTCACG 60 Query 20552 GCGCTGCAGGGGGTCCTGGGTCCGGAGCAGGTGAACTACTCCTACCGCAACACCGACACC 20611 |||||| | || |||| | |||| ||||| | | |||||||||||||||| Sbjct 61 GCGCTGGCCGCGGCGTTGGGCAAGACGCAGACGAACTGGGCGTTCCGCAACACCGACACC 120 Query 20612 AACGACCAGTACGTCTGGGACGGGGAGTCGTTCGTGGTCTACCAGGACGTCTACCAGACT 20671 |||||||||||||| ||| ||| || |||||||| |||| || | ||| ||| || Sbjct 121 AACGACCAGTACGTGTGGAGCGGTGACGCGTTCGTGATCTATCACGGCGTGTACGGCACC 180 Query 20672 CCTGGCCCTCCGGGACCTGCACCAAACCTTTCTGCCGGCACCCTGACCGTGGGCGGCGAG 20731 || || || || || || || || | | | |||||||| || || | ||| | | Sbjct 181 CCGGGTCCGGTCGGTCCGGCGCCGAAGATGACGCCGGGCACCCTCACTGTCGACGGTGCG 240 Query 20732 CAGGTCGTAGACCCGGACTTCGGGGTGCGGGTGACCGGCACCAACCCGAACTACGTGGTC 20791 ||||| |||||| ||||| |||||||| ||||| |||| | ||| |||| Sbjct 241 ACGGTCGCTGACCCG---TTCGGTGTGCGGGTCTCCGGCGACAACGGCCAGTACTCGGTC 297 Query 20792 GACGTGGACCTGCCGCAGTTGCCCAAGGGCGACAAGGGCGACGTTGGTCCTTCGGGCTCG 20851 | |||||||| |||| || | |||||||||||||| ||| ||||| ||||| || Sbjct 298 GGGGTGGACCTCCCGCCGTCCCGTAAGGGCGACAAGGGTGACCAGGGTCCATCGGGGCCG 357 Query 20852 GTCTACACCTCGGTGGACGTGGACCAGACGGTGGCCCCGAACGACGGCGACGTCCTGGTA 20911 ||| ||||||||| ||||| ||||||| || || |||||||||||| || | | Sbjct 358 TTCTTCACCTCGGTCGACGTCGACCAGAACGTCGCGAAGAACGACGGCGATGTGTTCATC 417 Query 20912 CACGACGCGGACG-CGGGCAAGCT-CGTCTGGTCTCCCGGCCAGTTCGTGACCGAAGAGT 20969 ||||||| ||| |||| ||| | || | | | || ||| || | | ||| |||| Sbjct 418 TACGACGC-CACGTCGGGGAAGATGCGGCCTG-CGCCGGGCGGGTACTGGCTCGAGGAGT 475 Query 20970 ACGTGGTGCCTCCTTCTGGCTTCCCGAACGCCAGCAAGAGTTCCTCGGACCTGCGCCACC 21029 | || || | || || |||||||||| |||| | | ||| || ||| Sbjct 476 ATGTCGTTGCGCCCGACGGGTTCCCGAACGTGTCCAAGGGCCAGACCGACACCCGACACA 535 Query 21030 TGCTGGTCACTTTGCTGATCCCCGCCAAGCCGTACCGCTACCGCTTCGACTTCTCGGGCG 21089 || |||| | | |||||| || ||| ||| || ||||| ||||||||| | |||| Sbjct 536 CCATGTTCACCGTCCAGATCCCGGCGAAGACGTTCCCGTACCGGTTCGACTTCACCGGCG 595 Query 21090 GTGTAGACGTCGAGTCCAAGTCCGGACACCA-GATCGACCTGGAGGTCCGGTCGAACCTG 21148 |||| |||||| || | || ||| || | |||||| ||||| |||| | ||| | Sbjct 596 GTGTCGACGTCTCGT-CGAGCGCGGGAACGATCATCGACATGGAGATCCGCACCAACATC 654 Query 21149 GACACCCCGACGTCCCCCGAAACCAACGGTCCGCTGGTCGGTTACGGCAAGGGCCAGGAC 21208 | || | | || || | | ||| || ||||| || |||||||||||||||||| Sbjct 655 GGTGCCGGGTCCGAGCCGGAGAAGACCGGCCCACTGGTGGGGTACGGCAAGGGCCAGGAC 714 Query 21209 GGCGAGGGTTGGCGTGAGGTGGCCTTCCGCGCGCACTCCGACG-TGGCGATCGACCCCTC 21267 || ||||| | || ||||| || ||||||||||||| ||||| ||||| |||||||| Sbjct 715 GGTGAGGGGTTCCGAGAGGTCGCGTTCCGCGCGCACT-CGACGACCGCGATTGACCCCTC 773 >seq204283 Length=732 Score = 165 bits (182), Expect = 2e-36 Identities = 238/336 (71%), Gaps = 0/336 (0%) Strand=Plus/Plus Query 15319 CTACACCACCGGGCAGTACTCTCCGGTACCCTCCTTTGAACAGACGACGCACGTCGGACT 15378 |||||||||||| | ||||| ||||| || || ||||| || |||||||| || Sbjct 94 CTACACCACCGGCGACTACTCCCCGGTTCCGGAGTTCTCCCAGACCACCCACGTCGGTCT 153 Query 15379 GGCCTCGCGGGTGACTGCCGGAGGCAAGTCGCCGGAGTGGGTGAACACCCTGCTGGTCAC 15438 ||| || ||| | || || || ||||| || || || ||| ||||||| ||||| | Sbjct 154 GGCTTCCCGGATTACCGCTGGCGGCAAATCACCCGAATGGCTGAACACGGCCCTGGTTTC 213 Query 15439 CGGAGCCAACCTGGCGATCGGCCTGCTGGGAACCGCGATCGGCGTACCTGGTCTGCAACT 15498 || ||||||| | | ||||| || || | ||||||||| || || |||||| || Sbjct 214 GGGGAGCAACCTGTTGCTAGGCCTCCTCGGCAGCGCGATCGGTGTGCCGGGTCTGGTGCT 273 Query 15499 GGGGGTCTTCGAGAACGCGGTCAAGAACAAGGTACTCGCGTTCCACTCGAGTGAAGACCG 15558 ||| ||||||| |||| ||| ||||||||| | || | | |||||| || ||| Sbjct 274 CGGGATCTTCGACAACGTGGTGAAGAACAAGCTGTTCCCCTACCACTCCGCGGAGAACCT 333 Query 15559 CCAGCGCGCTACCGAGGCTGGGCCGTGGCGGTTCCGCGAGACTTTCGCCGAGACCTCCTC 15618 ||||| || | || || |||| |||||||||| ||| ||||||||| | || | Sbjct 334 GCAGCGAGCGAACGCCGCGGGGCGGTGGCGGTTCAAGGAGGACTTCGCCGAGTCGGCCAC 393 Query 15619 GACCGGTCTCTCGCTGACCACGTTCGCCGGGATGAA 15654 ||||||| | |||| ||||||| | | ||||| Sbjct 394 GACCGGTTTGAACCTGAACACGTTCTCTGCCATGAA 429 >seq139601 Length=1978 Score = 152 bits (168), Expect = 1e-32 Identities = 518/791 (65%), Gaps = 26/791 (3%) Strand=Plus/Minus Query 14367 AGGCTTTCGCCCAGCTCACCTTTGACGAGAAGGACGAGCGCGACCTGCTGGCCCACCCGA 14426 |||| | |||| | || ||| | |||||| |||||| ||| | | ||| ||||| Sbjct 781 AGGCCTACGCCGACCTGACCGTCGACGAGCGCGACGAGTTCGAGGAGTTCGCCAACCCGC 722 Query 14427 AGGCGGAGCTGCAGCTACGCGACAAGGACAACCGGCTGTGGGGCCTGTCCGGCGACTACC 14486 ||| | || |||| || |||||| | | ||||| | || |||||||||| Sbjct 721 GCGCGTACATGGAGCTGCGGACCAAGGAGATGGCGGTGTGGTCGCCGTGTGGCGACTACC 662 Query 14487 GGGAGCTGAAGTTCACCGAGAAGGAGAACGAACCCGGTTCGATCACCTTCACTG-TCCCG 14545 ||| |||||| | ||| ||| | | ||||| |||| | ||| ||||| Sbjct 661 AGGACATGAAGTGGAACGACAAGCGTTCCCAGCCCGGCGGTTTCACTGTT-CTGCTCCCG 603 Query 14546 GACGACGAGTACTACCGCGAGTACTTCTACGGGTT-CCCGAA-AGGCCAGGCTCGGCCGG 14603 |||||| | |||| | ||||||||| |||| ||||| ||||| | || ||| Sbjct 602 GACGACTCGCACTATCAGGAGTACTTCGACGGCCAACCCGACGAGGCC--GTCCGTCCGA 545 Query 14604 TGGTGGTGCAGCTGCCTTTC---TACCGCACCTTGTGGTTGATCACCGACTTCAAGCGCA 14660 | ||| | | | |||| | ||| || |||||||| ||||| | |||| | | Sbjct 544 TCGTGATCCGGATGCCCGGCGAGTACACGACGTTGTGGTTCATCACGAAGTTCACTAGGA 485 Query 14661 AGCGCGAGGGCCTGAAGCGGGTGATCGAGGTCTC--CGGTGTGCACTGCCTGGAGTACCT 14718 ||| ||||||| | | | | ||||||| |||| || | || ||| | || Sbjct 484 CCCGCAAGGGCCTCAGGAAGTTCTACGAGGTCGAGGCGGTCGGCGCG--CTCGAGCAGCT 427 Query 14719 GAACTGGGTCCACCTGTGGCCCTGTCCCTGGTTCCCG---GCCGAGTTCCAGCCGCTGCA 14775 | || ||| |||||||| || ||||| || ||||||||||| || | | Sbjct 426 GTCCTATATCCGGCTGTGGCCGTG---CTGGTGGTCGATCGCCGAGTTCCAACCCATTGA 370 Query 14776 CTACTGGTTCGCAGTCGGACCGGCCGCGACCAACCTCGCCGCAGCCCTGATGGCTAACCT 14835 | | ||||| ||||||||| |||| | | | |||| | ||| | ||||| Sbjct 369 GTTCGACTTCGCGCTCGGACCGGTCGCGTCGATCTGCGCCAACTCGTTGACCGGCAACCT 310 Query 14836 CGTTCGCCTCCAGGGCGAGCTGTTCTCGATCCCCTCTGGTAACCTGCTGGA-CCTGAACA 14894 | || || |||| ||||||||||||||| | || |||||||| | ||||| | Sbjct 309 GATCCGTCTGCAGGCGCCGCTGTTCTCGATCCCGACCGGGAACCTGCTCAAGCCTGAG-A 251 Query 14895 ACTGGAACGTGGTTAAGAAGGCTCTCTACCCGTTGGTGGTGAACCCGCGAAACAAGCTGG 14954 | ||| | || || || ||| ||||| | ||||||||||||| |||||| | | Sbjct 250 CGTACAACTTCGTGCGCAACGCGCTCGACCCGATCATGGTGAACCCGCGCAACAAGTTCG 191 Query 14955 TCAAGGACACCTCAACCTGGATCACCGCCTCCTGGCGCATGGACAAGTGCCTGGACGCGT 15014 || |||||| | | ||| | | ||| ||||| ||||||||| || ||||||| Sbjct 190 TCGGCGACACCACGAAATGGGACTCGGCCGCCTGGAAGATGGACAAGGCGCTCGACGCGT 131 Query 15015 TCAAGGAGGTCTGCGACACTGAGGGCCTGACGATCACC-ACCACCTTCTTCGACCCCGAC 15073 |||| ||| |||| | | | | || ||||||| |||| ||||||||||||||| Sbjct 130 TCAACGAGATCTGTCTGCCCAACGACGTGCAGATCACCTACCA-GTTCTTCGACCCCGAC 72 Query 15074 GCGGGCGACCCGCAGCCTTTCCCGGAGTACTTGGTGCTGAACCGGCCGACCCTGGTCGTA 15133 | ||||||||| || ||||| |||| | || || || |||| || |||| Sbjct 71 ---GTCGACCCGCAACCGTTCCCCGAGTTCCTGCACCTCGACTCGCCGCGGATGATCGTC 15 Query 15134 GACTTTGTTGA 15144 ||||| || || Sbjct 14 GACTTCGTCGA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144313987368962