Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 601 5e-167
seq7533 107 3e-18
seq56708 96.9 5e-15
>seq13366
Length=6323
Score = 601 bits (666), Expect = 5e-167
Identities = 1039/1497 (69%), Gaps = 17/1497 (1%)
Strand=Plus/Plus
Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821
|||||||| || || | ||||||||||| | | | ||| |||||||| |||| |
Sbjct 494 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 553
Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881
||||||| || ||||||| |||| |||| ||| |||||| || || |||||
Sbjct 554 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 613
Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941
||| |||| | || | ||| || || | || |||||||| || || ||||||||||
Sbjct 614 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 673
Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001
||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | |
Sbjct 674 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 733
Query 77002 GTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTG 77058
| | || || | |||| ||| | ||| | || || ||| | |||||||
Sbjct 734 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 793
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
||| || ||||| |||| |||||| | | || ||| | | || |||||| | |
Sbjct 794 GATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 853
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| |||| ||||||||||||| || ||||| | ||||||||| ||| | ||||
Sbjct 854 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 913
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | ||||||| |||| || | |||||| |||||||| ||||| |||||||| || | ||
Sbjct 914 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 973
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
||| | ||| | | ||||||| || || || ||||| || ||| |||||||
Sbjct 974 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 1033
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| |||| ||| ||||| | ||| || || || || || | || || | ||
Sbjct 1034 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 1092
Query 77359 CATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417
| || |||||| || | |||||| ||||||||| ||||||||| ||||| |||||
Sbjct 1093 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 1152
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477
|| |||||||||||||| || || | | ||||||| | ||||| ||| || |
Sbjct 1153 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 1212
Query 77478 GGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536
| ||| | | | | | ||| |||||||| | |||||||| |||||||||||||||||
Sbjct 1213 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 1271
Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596
||||||| |||| ||| |||| || || || | ||||||| |||||| || |||| |||
Sbjct 1272 ATGTCTCATATTTGAAGTTTTTGCCTCAGGGACAGGATAAAAATTAACATCAATAACTTT 1331
Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656
|| | |||| | || | || | || |||| ||| ||||| ||||||
Sbjct 1332 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTT 1391
Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716
|| | |||||||||||| | ||||| || || || || || ||||| || |||| |
Sbjct 1392 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 1451
Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776
| ||||| | | ||| || || ||||| |||||||| |||||||| |||||||
Sbjct 1452 TGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 1511
Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836
||| || |||||| | || || | |||||||| | || | || || || || || |
Sbjct 1512 TTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCAC 1571
Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TC 77892
|| | ||| ||||| || ||||| | ||||| |||| | | | | ||| || ||
Sbjct 1572 TTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGAC--TTGTTTTATAAATC 1627
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA-TCATCC 77951
| | ||| |||||||| | |||||| ||||||||| ||||| || || ||| |
Sbjct 1628 GTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGCG 1686
Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011
| ||||| || |||| || ||||| | ||| | |||| | | |||| ||||
Sbjct 1687 AGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 1746
Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071
||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| ||
Sbjct 1747 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 1806
Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131
||||| ||||| || | ||| | || || | ||||| | |||||| || |||| |||
Sbjct 1807 CCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAA 1866
Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191
||||| | | || || ||||| || || || ||||||| ||||||||| || || |||
Sbjct 1867 ATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 1926
Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248
|| |||||||||||||| | | ||| || || ||||| || |||| || |||
Sbjct 1927 TACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAA 1983
Score = 114 bits (126), Expect = 2e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
|||||| ||||| |||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct 2609 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 2668
Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652
| ||| ||||| || |||| ||| |||| | || ||| || |||| |||
Sbjct 2669 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2719
Score = 96.9 bits (106), Expect = 5e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812
|| || || || || |||| ||| |||| |||||||| ||||| | ||| ||||||||
Sbjct 3380 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCC 3439
Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872
||||| | ||| || ||| |||||||||||||| |||| | |||| | ||| ||||
Sbjct 3440 GGATGATCTGTGGTCTTAGTAGCTGCTATTTCTGCAGCTAGATTATCAAGCTCAGCAGTT 3499
Query 78873 GTGACCCCATTATATA 78888
|| || ||| |||||
Sbjct 3500 GTTACACCAGAATATA 3515
>seq7533
Length=2710
Score = 107 bits (118), Expect = 3e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | |
Sbjct 680 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 621
Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735
|||||||| |||||||||||||| |||||||| | | |||||||
Sbjct 620 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 572
Score = 100 bits (110), Expect = 4e-16
Identities = 183/262 (70%), Gaps = 11/262 (4%)
Strand=Plus/Minus
Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182
||| | ||||| ||| || |||||| || | | |||| |||| ||| ||| | |
Sbjct 1895 AAAAGCTTAAA---TAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGT 1840
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
|| ||| || || | |||||||| || || |||||||| | ||||||||||| ||
Sbjct 1839 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGC- 1781
Query 48243 AAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC--- 48298
|||| | || || || ||||| || || || || ||||| || | | | |||||
Sbjct 1780 AAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAA 1721
Query 48299 -GTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357
||| ||| ||| | || |||||| || ||||| || ||||||||||| ||||| |
Sbjct 1720 TGTAGCTGTCTT-GCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATG 1662
Query 48358 GCATTGTTTCTATAGCATTAAA 48379
| | ||||| || ||||| ||
Sbjct 1661 GTAGAGTTTCAATTGCATTGAA 1640
>seq56708
Length=5257
Score = 96.9 bits (106), Expect = 5e-15
Identities = 242/367 (66%), Gaps = 3/367 (1%)
Strand=Plus/Plus
Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026
|||||| ||| || || |||||||||||| | || | || ||| | | ||| | |
Sbjct 2030 TTATGACTCCAGTATTACCGATGTTAGCAGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 2089
Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086
|||||| |||| ||| |||||| | || ||||||||||||| ||||| || ||||| |
Sbjct 2090 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 2149
Query 171087 ATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATA 171146
||||||| ||| | || | ||| | | | | |||||||| | | || |
Sbjct 2150 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 2209
Query 171147 AAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTATTATCT 171206
||||| | || | || || || | || ||||||||| |||| | | ||||
Sbjct 2210 AAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGATTTGATCT 2269
Query 171207 TGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAAGTC 171263
||||| | ||| | || | ||||||| ||| || ||| | || || || |
Sbjct 2270 TGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTACAT 2329
Query 171264 TAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTGATT 171323
|||| || |||||| | ||| | ||| ||||| | | || || | | |||||||
Sbjct 2330 TAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTGATT 2389
Query 171324 GTTTATA 171330
| |||||
Sbjct 2390 GCTTATA 2396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 692262788561120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |