Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031035.1
Length=61626
Score E
Sequences producing significant alignments: (Bits) Value
seq171065 134 5e-27
seq74518 118 4e-22
seq47396 87.8 7e-13
seq20617 82.4 3e-11
>seq171065
Length=1298
Score = 134 bits (148), Expect = 5e-27
Identities = 131/169 (78%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 36577 ACCCGTCGCACTACACGTCGCACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACA 36636
||||| ||||||| | |||| || || ||||||||||||||| ||||||||||||||
Sbjct 30 ACCCGCAGCACTACGTGACGCATCCCAGCGGCGTGGAGTGCATCGAGATCACCGAGCACA 89
Query 36637 TGGGCTTCAACCTCGGCAACGCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACG 36696
|||||| | |||||||||| |||| ||| |||||||| |||| | || |||| |
Sbjct 90 TGGGCTACCTGCTCGGCAACGTGATCAAGTACGTCTGGCGCGCCGACATCAAGGGCGAGG 149
Query 36697 CGATCGAGGATCTGAAAAAGGCCGCGTTCTACGTCGACCGTGAAATCGC 36745
| | ||||| |||| |||||| ||||||| | ||||| || |||||
Sbjct 150 CACTGGAGGACTTGAAGAAGGCCCGGTTCTACCTGGACCGGGAGATCGC 198
>seq74518
Length=2537
Score = 118 bits (130), Expect = 4e-22
Identities = 351/527 (67%), Gaps = 21/527 (4%)
Strand=Plus/Minus
Query 26019 CTGTGCATCCGATCGAACGACGGCACGCACCGTGATGAGGACTGGGCGAACAACTACGCG 26078
|||| ||||| |||||||||||||| ||| || | ||| || | |||||||||
Sbjct 1305 CTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACAGAACTACGCG 1246
Query 26079 TGGTGCAAGCGCGCGGTCGACGACGGCCGGCTGGCGT-TCTTCATCGTGTATTTCGTGTG 26137
||| | ||| ||||| ||| || || ||| || ||||| || | |
Sbjct 1245 TGGATCCGCCGCAGCCTCGACCGCGGGCGCCTC-CGTGTCGGGATCGTCTACTGCTACCT 1187
Query 26138 GCGGCCGAACTGGC---AGGCCGCGGTTGACACGCTGAA----AGCGCAAGTA--GGCGA 26188
||| |||||||||| || ||||| || || | | | || || ||||
Sbjct 1186 GCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGATCGATCGTGCGGGCGG 1127
Query 26189 GCCGCATCCGAAGATGGCGGTGATGCTCGACGTCGAATCGTGGAACGGGCAGATCGGCGG 26248
| |||||| | | ||| | ||||||||||||||||||| | |||| | ||||||
Sbjct 1126 ACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCCGG---CGGGAACCCCGGCGG 1070
Query 26249 TGACCAGTCGGCCGGCATCAATGCTGCGTTCGAGCAGATCGCCGGTTG-GCTGGGCG-AC 26306
|| ||||| | | ||||| | | | | | ||| || | || || | |
Sbjct 1069 CGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCCGGTGGCAA 1010
Query 26307 CGC-CGGCGCGTGATCGGCTACGGCAACACCGGTGACCTCAACGCGTTGTGGCCGCGCAA 26365
||| ||||| ||||||||||||| ||| | | ||| || || | |||||| | |
Sbjct 1009 CGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGC-GTGTTC 951
Query 26366 GCCTGAAGGTG-TGCGGCTGGTCGTCGCCGGTTACGGCAAGCTTCCGA-CCTATCCGGGC 26423
||| | || |||| || ||| ||||||||||||| ||||| ||| |||| |
Sbjct 950 GCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTGGCCGGAC 891
Query 26424 ATGATCGCCCACCAATACACCGATGGGCAGGGCTACGGAGGTGGCCTGCCGGAAGGCGCG 26483
| |||||| ||||| |||||||| || | ||| | ||| || || || || ||||| ||
Sbjct 890 A-GATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAGGGGCA 832
Query 26484 CCGCCATTCGGGCGGTGCGACATGAACGCCGCAAACGGGCTGACCGC 26530
||||| ||||| |||||||||||| |||| |||| || || ||
Sbjct 831 CCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGC 785
>seq47396
Length=7053
Score = 87.8 bits (96), Expect = 7e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 853 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 910
||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 4059 GTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 4116
>seq20617
Length=36039
Score = 82.4 bits (90), Expect = 3e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 36585 CACTACACGTCGCACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACATGGGCTTC 36644
|||||||| ||||| | ||||| | ||||||||| ||||||| |||||||| ||||
Sbjct 28218 CACTACACCGCGCACGCCAGTGGGATCGAGTGCATCGAGATCACCAAGCACATGAACTTC 28159
Query 36645 AACCTCGGCAACGCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACGCGATCGAG 36704
| | |||||||| | || |||||||||||| | || || ||||| | |||
Sbjct 28158 TGCTTGGGCAACGCGATGAAGTACATCTGGCGCGCTGGGCTCAAGGGCGACAGTGTGGAG 28099
Query 36705 GATCTGAAAAAGGCC 36719
|||||| ||||||
Sbjct 28098 GATCTGCGCAAGGCC 28084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 196433130463448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |