Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031035.1 Length=61626 Score E Sequences producing significant alignments: (Bits) Value seq171065 134 5e-27 seq74518 118 4e-22 seq47396 87.8 7e-13 seq20617 82.4 3e-11 >seq171065 Length=1298 Score = 134 bits (148), Expect = 5e-27 Identities = 131/169 (78%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 36577 ACCCGTCGCACTACACGTCGCACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACA 36636 ||||| ||||||| | |||| || || ||||||||||||||| |||||||||||||| Sbjct 30 ACCCGCAGCACTACGTGACGCATCCCAGCGGCGTGGAGTGCATCGAGATCACCGAGCACA 89 Query 36637 TGGGCTTCAACCTCGGCAACGCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACG 36696 |||||| | |||||||||| |||| ||| |||||||| |||| | || |||| | Sbjct 90 TGGGCTACCTGCTCGGCAACGTGATCAAGTACGTCTGGCGCGCCGACATCAAGGGCGAGG 149 Query 36697 CGATCGAGGATCTGAAAAAGGCCGCGTTCTACGTCGACCGTGAAATCGC 36745 | | ||||| |||| |||||| ||||||| | ||||| || ||||| Sbjct 150 CACTGGAGGACTTGAAGAAGGCCCGGTTCTACCTGGACCGGGAGATCGC 198 >seq74518 Length=2537 Score = 118 bits (130), Expect = 4e-22 Identities = 351/527 (67%), Gaps = 21/527 (4%) Strand=Plus/Minus Query 26019 CTGTGCATCCGATCGAACGACGGCACGCACCGTGATGAGGACTGGGCGAACAACTACGCG 26078 |||| ||||| |||||||||||||| ||| || | ||| || | ||||||||| Sbjct 1305 CTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACAGAACTACGCG 1246 Query 26079 TGGTGCAAGCGCGCGGTCGACGACGGCCGGCTGGCGT-TCTTCATCGTGTATTTCGTGTG 26137 ||| | ||| ||||| ||| || || ||| || ||||| || | | Sbjct 1245 TGGATCCGCCGCAGCCTCGACCGCGGGCGCCTC-CGTGTCGGGATCGTCTACTGCTACCT 1187 Query 26138 GCGGCCGAACTGGC---AGGCCGCGGTTGACACGCTGAA----AGCGCAAGTA--GGCGA 26188 ||| |||||||||| || ||||| || || | | | || || |||| Sbjct 1186 GCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGATCGATCGTGCGGGCGG 1127 Query 26189 GCCGCATCCGAAGATGGCGGTGATGCTCGACGTCGAATCGTGGAACGGGCAGATCGGCGG 26248 | |||||| | | ||| | ||||||||||||||||||| | |||| | |||||| Sbjct 1126 ACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCCGG---CGGGAACCCCGGCGG 1070 Query 26249 TGACCAGTCGGCCGGCATCAATGCTGCGTTCGAGCAGATCGCCGGTTG-GCTGGGCG-AC 26306 || ||||| | | ||||| | | | | | ||| || | || || | | Sbjct 1069 CGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCCGGTGGCAA 1010 Query 26307 CGC-CGGCGCGTGATCGGCTACGGCAACACCGGTGACCTCAACGCGTTGTGGCCGCGCAA 26365 ||| ||||| ||||||||||||| ||| | | ||| || || | |||||| | | Sbjct 1009 CGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGC-GTGTTC 951 Query 26366 GCCTGAAGGTG-TGCGGCTGGTCGTCGCCGGTTACGGCAAGCTTCCGA-CCTATCCGGGC 26423 ||| | || |||| || ||| ||||||||||||| ||||| ||| |||| | Sbjct 950 GCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTGGCCGGAC 891 Query 26424 ATGATCGCCCACCAATACACCGATGGGCAGGGCTACGGAGGTGGCCTGCCGGAAGGCGCG 26483 | |||||| ||||| |||||||| || | ||| | ||| || || || || ||||| || Sbjct 890 A-GATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAGGGGCA 832 Query 26484 CCGCCATTCGGGCGGTGCGACATGAACGCCGCAAACGGGCTGACCGC 26530 ||||| ||||| |||||||||||| |||| |||| || || || Sbjct 831 CCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGC 785 >seq47396 Length=7053 Score = 87.8 bits (96), Expect = 7e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 853 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 910 ||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 4059 GTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 4116 >seq20617 Length=36039 Score = 82.4 bits (90), Expect = 3e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 36585 CACTACACGTCGCACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACATGGGCTTC 36644 |||||||| ||||| | ||||| | ||||||||| ||||||| |||||||| |||| Sbjct 28218 CACTACACCGCGCACGCCAGTGGGATCGAGTGCATCGAGATCACCAAGCACATGAACTTC 28159 Query 36645 AACCTCGGCAACGCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACGCGATCGAG 36704 | | |||||||| | || |||||||||||| | || || ||||| | ||| Sbjct 28158 TGCTTGGGCAACGCGATGAAGTACATCTGGCGCGCTGGGCTCAAGGGCGACAGTGTGGAG 28099 Query 36705 GATCTGAAAAAGGCC 36719 |||||| |||||| Sbjct 28098 GATCTGCGCAAGGCC 28084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196433130463448