Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13366 589 3e-163 seq7533 98.7 1e-15 seq170880 86.0 9e-12 >seq13366 Length=6323 Score = 589 bits (652), Expect = 3e-163 Identities = 1116/1627 (69%), Gaps = 19/1627 (1%) Strand=Plus/Plus Query 75357 TTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGAT 75416 |||||||| || || | || |||||||| | | | |||||||||||| |||| | Sbjct 494 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 553 Query 75417 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG 75476 ||||||| || ||||||| |||| |||| ||| |||||| || || ||||| Sbjct 554 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 613 Query 75477 AATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 75536 ||| | || | || | ||| || || | || |||||||| || || |||||||||| Sbjct 614 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 673 Query 75537 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 75596 ||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | | Sbjct 674 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 733 Query 75597 GTTTGATATCATCTGGAAGATTTGTATTTT---GAATGGATCCGCCATCAGATATAATTG 75653 | | || || | |||| ||| | ||| | || ||||| | ||||||| Sbjct 734 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 793 Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713 ||| || || || |||| |||||| | | || ||| | | || |||||| | | Sbjct 794 GATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 853 Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773 | || | ||||||||||||| || ||||||| ||||||||| ||| | |||| Sbjct 854 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 913 Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833 | | ||||||| |||| || | |||||| ||||| || |||||||||||||| || | || Sbjct 914 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 973 Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893 ||| | ||| | | ||||||| || || || ||||| || ||| ||||||| Sbjct 974 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 1033 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | |||| || ||||| | ||| || || || || || | ||| || | || Sbjct 1034 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 1092 Query 75954 CATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCA 76012 | || |||||| ||| | || || |||||||||| ||| ||||| || ||||| ||| Sbjct 1093 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 1152 Query 76013 CCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAA 76072 || |||||||||||||| || || | | ||| ||| | |||| ||| || || Sbjct 1153 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 1212 Query 76073 GGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCT 76131 | ||| | | | | | ||| |||||||| | |||||||| ||||||||||||||||| Sbjct 1213 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 1271 Query 76132 ATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTT 76191 ||||||| |||| ||| ||| || || || | ||| ||| |||||| ||| |||| ||| Sbjct 1272 ATGTCTCATATTTGAAGTTTTTGCCTCAGGGACAGGATAAAAATTAACATCAATAACTTT 1331 Query 76192 ATTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC 76250 || | |||| ||| || | || | || |||| ||| ||||| |||| | Sbjct 1332 GTTTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGT 1390 Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 || | |||||||| ||||| ||||| || || || || || || || || |||| Sbjct 1391 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 1450 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | | ||||| | | ||| ||||| ||||| ||||| || ||||| |||||||||| Sbjct 1451 CTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTT 1510 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 ||| || |||||| ||||||| | |||||||| | | | || || ||||| || | Sbjct 1511 TTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCA 1570 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--T 76486 || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || | Sbjct 1571 CTTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATAAAT 1626 Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA-TCATC 76545 || || ||| |||||||| | ||||| ||||||||| ||||| || || ||| | Sbjct 1627 CGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGC 1685 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 | |||||||| |||| |||||||| | ||| | |||| | | || | ||| Sbjct 1686 GAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTT 1745 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 |||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| || Sbjct 1746 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 1805 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 ||||| ||||| || | ||| | ||| || | ||||| | |||||| || |||| ||| Sbjct 1806 ACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATA 1865 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 || || | | || || ||||| || || || ||||||| |||||||||||| || || Sbjct 1866 AATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTT 1925 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 ||| |||||||||||||| | | || || || ||||| || |||| || ||| Sbjct 1926 ATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGA 1985 Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 || || | || | || || ||||| || || || |||||| |||| Sbjct 1986 ACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 2045 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 ||||| |||| || || ||| | || || || || ||||| || |||| | ||| Sbjct 2046 TGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAG 2105 Query 76966 AAAACAG 76972 |||||| Sbjct 2106 GAAACAG 2112 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 2609 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 2668 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 | ||| ||||| || |||| ||| | || | || ||||||||| | ||| Sbjct 2669 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2719 >seq7533 Length=2710 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || |||| ||||||||||| || ||||| || || || || |||||||||||||| | | Sbjct 680 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 621 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 |||||||| |||||||||| || || |||||||| | | ||||||| Sbjct 620 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 572 >seq170880 Length=1133 Score = 86.0 bits (94), Expect = 9e-12 Identities = 243/363 (67%), Gaps = 14/363 (4%) Strand=Plus/Minus Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768 ||||| || || || || || || | ||||||| || || || || ||||| || | | Sbjct 1076 TGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACCCTGGTCGACA 1017 Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATT 76827 || | ||||||||| || | || | | ||| || | |||||||| || ||| || || Sbjct 1016 TAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGA-GTATCCGTT 958 Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC 76887 ||| ||| || || ||||| | ||||| || || ||| ||||| || || || Sbjct 957 TGTGCCACCGATGTAGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGCCGATACCGCC 898 Query 76888 TGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTAT 76946 || | || ||||| | || || ||| |||| ||||| ||||||||||| || | Sbjct 897 GGCGGTCTTGGAGATCATGGCGCA-CGTCTTCAGGGTGTCGTAGATGCCCTCGATCGAGT 839 Query 76947 CATCCATCAT-GTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTTCCTGCA 77002 | ||| |||| | | || || ||| |||| | || | || || || ||| Sbjct 838 CGTCCTTCATCGCCACGAGGA----AGCAAGACGCAAGCTGGGGGTGGGGCGTGCCAGCA 783 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATGTTTC 77061 || || | || || || ||||| ||||| | ||||| || | |||| ||||| || || Sbjct 782 TTGAAGAGGGTGGGCGAGGCATGGGTGAAGTACTTTTCGGACATGTAG-TTGTACGTCTC 724 Query 77062 AAT 77064 || Sbjct 723 GAT 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710465124970560