Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031060.1 Length=52726 Score E Sequences producing significant alignments: (Bits) Value seq4597 93.3 1e-14 seq230063 82.4 3e-11 >seq4597 Length=157418 Score = 93.3 bits (102), Expect = 1e-14 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 33718 TCGTCGACCTCGACCGAGATGTTCGTCGTCCAGTG-GTC-ACCGGACTCCTGCTTGCAGT 33775 ||||| |||||||| ||||||||||| |||||||| || ||| | | | |||||||| Sbjct 124419 TCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--CTTGCAGT 124476 Query 33776 TGATGAACTCCTCGATCTGGTGATCAGCCCAGTGCATCATCGCCATGCGAGCCGAGCGGC 33835 ||||||| || || | | || ||||| |||||| ||||| || || || || | Sbjct 124477 TGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGAC 124536 Query 33836 GAACGCCGCCAGCGACCACACACTGTGCGATGGCATGGTCGATCGACATCGCGTCGATCC 33895 | | || || ||||| || | |||||| | ||||||||| ||| || ||||| | Sbjct 124537 GTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGC 124596 Query 33896 CCGTCAG 33902 | ||||| Sbjct 124597 CGGTCAG 124603 >seq230063 Length=868 Score = 82.4 bits (90), Expect = 3e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 5138 GCATTCGCCTGTAGCTCAATTGGCAGAGCACCCGGCTGTTAACCGGGCGGTTGAAGGTTC 5197 |||||| ||||||||||||||||||||||| ||| ||||||| ||| |||| ||||| Sbjct 82 GCATTCCCCTGTAGCTCAATTGGCAGAGCAGCCGACTGTTAATCGGCAGGTTATTGGTTC 141 Query 5198 GAGTCCTTCCAGGCGAGCCA 5217 |||||| | || |||||| Sbjct 142 GAGTCCAATCGGGGGAGCCA 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168046839934048