Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031061.1
Length=53431
Score E
Sequences producing significant alignments: (Bits) Value
seq157980 304 4e-78
seq167236 230 8e-56
seq84561 179 1e-40
seq219746 152 2e-32
seq6603 86.0 2e-12
>seq157980
Length=2738
Score = 304 bits (336), Expect = 4e-78
Identities = 527/761 (69%), Gaps = 24/761 (3%)
Strand=Plus/Minus
Query 39411 GGCATCCACGTCGTCGCCGCGACGACCTCCGAGAAGGGCCTCGAGGTCGAGGTTGTCGAC 39470
||| ||||||| ||||||| |||||| ||| ||| || || ||| || ||||||
Sbjct 1711 GGCGTCCACGTGTTCGCCGCCACGACCAAGGAGCGGGGTCTGCAGACCGACGTCGTCGAC 1652
Query 39471 CTCCGCGAGTTCATCCCCGGCGTGACGCGGTCCGCCGAGTCGGGCACCCGGCTCGTCACC 39530
||||| ||| | | ||||| || | ||| ||||| | ||||| || ||||||||
Sbjct 1651 CTCCGTCAGTACGTGCCCGGGCTGCTGTCGTCGCCCGAGGCCGGCACTCGCATCGTCACC 1592
Query 39531 GATGTCCCGTCGTTCCTCGCCGAACTGGACCGGTACAGCATCGATCCGGACTTCTCGACC 39590
|| ||| ||||||| || || || ||||| |||| ||||| | | |||||
Sbjct 1591 GACGTCGTGTCGTTCGAGGCTGAGCTCGACCGCTACAAGCTCGATGAGACCGCGTCGACG 1532
Query 39591 CTGTGGGGTGACGAGACGAAGGGCCGCGTCGAAGCTGTCTACAACGATCACGCGAACG-- 39648
|||||||||||||||| ||||||||||| | || |||||||||| |||| |||||
Sbjct 1531 CTGTGGGGTGACGAGAACAAGGGCCGCGTGGTCGCGATCTACAACGACCACGTGAACGCC 1472
Query 39649 -------------ACGGCCCCGGACTCCGCGACAACCGCCTGCGTCTGGAGCTGCGCGCC 39695
|||| | ||| | |||||||||||| |||| ||| |||| || ||
Sbjct 1471 GCCGACGGTGTCGACGGGCACGGTCACCGCGACAACCGTCTGCAGCTGCAGCTCCGTCCC 1412
Query 39696 GACCAGGACTGGACCGCCTGGCACCAGCTGTCCGGCCAGTACCTCCGGCAGGAAGAGTTC 39755
||| |||||||| | ||||||||| || | ||||| |||| ||| |||| ||||||
Sbjct 1411 GACGAGGACTGGGCGGCCTGGCACAAGATTTCCGGGAGGTACATCCCTCAGGCGGAGTTC 1352
Query 39756 GGCGACCGCGTCGAAGAGCTGCTCCACACCGTCGTCGAGCCGGCGCAGGCCGACCTGATG 39815
|||||| | |||| || || || |||||||| ||| || | ||||||||||| |
Sbjct 1351 GGCGACATCATCGAGGACCTCCTGCACACCGTGGTCTCACCCGACCAGGCCGACCTCGTC 1292
Query 39816 GAGGTCATCGACTCCATCCGCGCCACCAGCAAGGGCAGCTTCGAGTCGAAGATCTCCCGC 39875
||||||||||||||||||||| |||| |||| || |||||||| | ||| ||||
Sbjct 1291 GAGGTCATCGACTCCATCCGCACCACGAGCAGCGGGGTGTTCGAGTCCACCATCCGCCGC 1232
Query 39876 GCCGACGGCGGCCAACAGCTCGAGTACAAGGAGGACGTCTCCACCACCGCGGG--GAAGT 39933
| || ||| ||| |||||||| | |||||||| ||||||| || || ||| |
Sbjct 1231 GACGTCGGTACCCAGGCGCTCGAGTTCCGCGAGGACGTGTCCACCAGTGCCGGACGAACT 1172
Query 39934 CCGGTCAGCTCGAGGT-CCCGAAGACCGTCACCCTCGCGATCCGCCCCTGGGAAGGGCTC 39992
| || |||||||| || || | | ||||| |||| || | || || |
Sbjct 1171 -CAATC-CCTCGAGGTGCCTCGCGAGC-TGGTGCTCGCACTCCGGCCGTACGAGGGCATG 1115
Query 39993 GACACCTACAAAGTGGAGGGCTGGTTCCGGCTGCGCGTGCAGAACGGACAACTGTCGCTC 40052
|| |||||| | || || |||||||| || || || | ||| |||| |||
Sbjct 1114 GAGACCTACGAGGTCCGGGCGTGGTTCCGCCTCAAGGTCCACCAGGGATCACTGCTCCTC 1055
Query 40053 GCGATCAAGCTGAAGCCCACCCGCTCCATCCTCCGCGCCGCATGGGCCGACGTCATCGAA 40112
|| | ||||| || |||||| || |||| ||| || ||| ||||| || |||
Sbjct 1054 GCCGTGAAGCTCCGACCGACCCGCACCGTCCTGCGCCAGGCGTGGTCCGACATCGTCGCC 995
Query 40113 CAAATCGAGAAGCACCTCGACGGAAAGCCCGTCCTGGCAAC 40153
| |||||| || || | | ||||| |||||||| ||
Sbjct 994 GACATCGAG--GC-CCACACCACCAAGCCGGTCCTGGCCAC 957
>seq167236
Length=849
Score = 230 bits (254), Expect = 8e-56
Identities = 317/438 (72%), Gaps = 18/438 (4%)
Strand=Plus/Plus
Query 43834 CCCAATGACCGACTACCCCGCCCGCATGACGCTGCGGCCGATCGAGCGCTGGCCCGGGAA 43893
|||| ||| ||||||||| ||| |||||| ||||| |||||||| || |||||
Sbjct 388 CCCAGTGAACGACTACCCGGCCAACATGACCCTGCGCCCGATCGACCGGTGGCCACACTC 447
Query 43894 GCTGACCGCGAACCGTGTCAG-CTCGCA--GTTCTCGGCGCCGTGGCGGGCGACCCTCGA 43950
| |||| | ||| || |||||| |||| | ||| | | |||||||||||
Sbjct 448 CCACACCGGCAGCCG---CACTCTCGCACCGTTCACCGCGACACTCGGCGCGACCCTCGA 504
Query 43951 CCTACTCGACCGCGAACTCTGGCACCTCGGTCCGGCGGGACG--CAACGCG-CCTGCG-- 44005
|| ||| ||||||| || | || ||| ||| | | || || ||| ||||||
Sbjct 505 ACTCCTCAACCGCGAGCTGCGCCAACTCAACCCGTCCGCACTGTCACGGCGGCCTGCGAC 564
Query 44006 ----GTGCTGCAGATCGCGATGCGAGAGCAGGACTTCCG---GCTCGACGGGATGCCGCG 44058
|| |||||||||||| |||| ||| | |||||||| | |||||| | |||
Sbjct 565 CGCGGTCCTGCAGATCGCGCTGCGTGAGAACGACTTCCGCAAGAGCGACGGCCTCCCGAA 624
Query 44059 GGCGAACGCCCGCCCCGAGCACCCGGGCGTGATCCTCGCGATCGAGTCGACCAAGGGGCC 44118
||| ||||| | | |||| ||||| || |||||||||||||||||||||| | || ||
Sbjct 625 GGCCAACGCGCACGCCGACCACCCCGGGGTGATCCTCGCGATCGAGTCGAAACACGGCCC 684
Query 44119 GCTGTCGTTCCCCTGCGACCGGTTCGTGACGTGGCAGGACAACCTGCGCGCGATCGCGCT 44178
||||||| ||| || ||| |||| |||||||||||||| ||||||||||| ||
Sbjct 685 CCTGTCGTACCCGTGTGACAAGTTCACCCGCTGGCAGGACAACCTCCGCGCGATCGCACT 744
Query 44179 ATCCCTCGAGGCGCTCCGCAAGATCGATCGCTACGGCATCACCCCGAACGCTGAGCAGTA 44238
||||||||||| ||||||||| |||| || |||||| ||||| | || |||||||
Sbjct 745 GTCCCTCGAGGCACTCCGCAAGGTCGACCGGTACGGCGTCACCGACACCGGCCAGCAGTA 804
Query 44239 CACCGGGTGGAAACAGCT 44256
|||||| ||| ||| ||
Sbjct 805 CACCGGATGGGCACAACT 822
>seq84561
Length=1800
Score = 179 bits (198), Expect = 1e-40
Identities = 217/290 (75%), Gaps = 18/290 (6%)
Strand=Plus/Plus
Query 51597 CCGTGACATGTCACACTGGTGCCAGTGACACACGTGTGTCCACAACCCTCGGCACCTAC- 51655
||||||||||||||||||||| ||| |||||||||||||||| | |||| | ||| |
Sbjct 648 CCGTGACATGTCACACTGGTGTCAGCGACACACGTGTGTCCAGA--CCTCCGAACCCAGC 705
Query 51656 -----TCAGGTGGCGGGGGTTTCGTCATTCCGGAGGCGCATCACATGCCCCGAGAAGTCC 51710
|| ||| ||||||||||||| || ||||||||| ||| | ||||| |
Sbjct 706 CGCCATCGGGTC-CGGGGGTTTCGTCGTTTCGGAGGCGCG----ATGAGC---GAAGTAC 757
Query 51711 CCACCCCCGACGGCATCGACTCCCTTATCACCACCACCGAAGCCGCCACCCTCTGCGGAG 51770
||| |||||||||||| |||| || |||||||| |||| |||||| | ||| | |
Sbjct 758 TCACGCCCGACGGCATCCACTCGCTGATCACCACGGCCGAGGCCGCCCAGCACTGTCGGG 817
Query 51771 TGTCCACCGCCACCGTGCGGAAATGGGTGCAGCGCAACAAGCTCGAACCGTCCGGCCTCG 51830
| ||| |||||| | || || |||||||||||| ||||| ||| || |||| ||
Sbjct 818 TATCCGAGGCCACCATCCGCAAGTGGGTGCAGCGCGGGAAGCTGACACCATCGGGCCGCG 877
Query 51831 A-CGACAACGGCCGCAACCTGTTCCGGCTGATCGACGTCGCCAAGGCAGA 51879
| | ||| | | |||||||||||||| ||| |||| || |||||||| ||
Sbjct 878 ACCCACAGC-GTCGCAACCTGTTCCGTCTGCTCGATGTGGCCAAGGCCGA 926
>seq219746
Length=1062
Score = 152 bits (168), Expect = 2e-32
Identities = 229/321 (71%), Gaps = 6/321 (2%)
Strand=Plus/Plus
Query 44944 GTGTACGAATCACTCGGTGGCGAAGGGCCGCAAGCGGGTTGGCTCACAGCCGGACCTCTT 45003
||| || |||||||||| || ||||| |||||| | | | | || |||| |
Sbjct 24 GTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCCGACCCCAA 83
Query 45004 CGGCGAGATCCTTCCAGACGCGGCGTCGGAGCGGTCCCGCGCGACCATGTGGGACGTCCC 45063
||| ||| | | || |||| || | || || || || ||||| ||||||||||||
Sbjct 84 CGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGGGACGTCGT 143
Query 45064 GCGGTTCGCCGAGGTCCACCACTACCGCGCCGTGATCGTCGAGAACGTTGTCGACGCGTT 45123
|||||||||||| |||||| ||||| | | ||||||| ||||||||||||| ||
Sbjct 144 CCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTCGACGTGTA 203
Query 45124 TCACTGG--GTTCCGTTC-CGCGCGTGGCTGATGGCGATGGACTGCCTCGGCTACGACCA 45180
| |||| ||| |||| ||| ||||||| |||| |||| ||| |||||| ||||
Sbjct 204 TTTCTGGCCGTT--GTTCGCGC-CGTGGCTCGCCGCGACGGACGCCCTGGGCTACAACCA 260
Query 45181 CCACATCGTCATGCTCAACTCGATGCACGCCCAAGCGTTCGGTCCCGGGGCGCCGCAGTC 45240
| | ||||| |||||||||||||||||| || |||||||| ||| || || ||
Sbjct 261 CGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCTCAATC 320
Query 45241 TCGCGATCGGATGTACGTCGT 45261
| || |||| || |||||
Sbjct 321 AAGGGACAGGATCTATGTCGT 341
Score = 111 bits (122), Expect = 5e-20
Identities = 155/212 (73%), Gaps = 8/212 (4%)
Strand=Plus/Plus
Query 45367 GCCCGGCAGC-TC-GTGGGGCCGGTACCGCGCCCAATACGTCTACCGGTGCCCGAACGTC 45424
|||||| ||| || ||||||||| ||||||||||| ||| | | |||||||||| |
Sbjct 425 GCCCGG-AGCGTCAGTGGGGCCGCTACCGCGCCCAGTACACGTTCTCCTGCCCGAACGGC 483
Query 45425 CGCTGC-CGAAACGCGATCGTCGAACCGCTGTACCGTCCGGCCGCCGACATCATCGACTG 45483
||| || || | || ||||| | || || ||||| ||||||||||||||
Sbjct 484 TCATGCGCG----GCCACAGTGGAACCCGACTGGCGACCCGCCGCAGACATCATCGACTG 539
Query 45484 GACCCTTGAAGGCCAGCGAATCGGCGACCGCGCGAAGCCGCTCGCCGCGAAGACGATGGC 45543
| | || ||| || ||||| |||||| ||||| |||| |||||| ||| |
Sbjct 540 GTCGCTGCCCGGCACCCGCATCGGTGACCGCAAACGCCCGCTGGCCGAGAAGACCATGAC 599
Query 45544 GCGCATCCAGGCCGGGATCGACCGCTACTGGG 45575
|| ||||||||||||||||||||||||||||
Sbjct 600 CCGTATCCAGGCCGGGATCGACCGCTACTGGG 631
>seq6603
Length=23608
Score = 86.0 bits (94), Expect = 2e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 14219 CGCCTCCGGCGGTGTCATGCCCGGCTACACCCCGGGCCGCGACGTGCACCACTTCGCATC 14278
|||| | || ||||| |||| |||||| |||| ||| |||| ||| ||||| ||
Sbjct 5996 CGCCGCTGGTGGTGTGCTGCCGGGCTACTCCCCTGGCTTCGACAACCACACCTTCGTCTC 5937
Query 14279 ACCGACCGGCGGCAATCTCGCGCTGTCGGGTGGCGAGGCGATCATGCGCCCGGAGTGGAC 14338
|| || || ||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct 5936 CCCCACTGGTGGCGTGCTGCACCTGTCCGGTGGCGAGGCGATCATGCGCCCGGAGTGGAC 5877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170295416880478
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |