Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031078.1
Length=50082
Score E
Sequences producing significant alignments: (Bits) Value
seq107508 497 3e-136
seq128547 383 5e-102
seq139202 325 1e-84
seq42003 251 2e-62
seq241813 217 5e-52
seq29854 167 7e-37
seq29830 154 5e-33
seq225334 152 2e-32
seq164420 150 6e-32
seq107507 136 1e-27
seq4597 125 2e-24
seq254749 122 3e-23
seq244733 109 2e-19
seq172122 104 7e-18
seq205449 100 9e-17
seq267958 87.8 6e-13
seq207833 82.4 2e-11
>seq107508
Length=1295
Score = 497 bits (550), Expect = 3e-136
Identities = 731/1023 (71%), Gaps = 20/1023 (2%)
Strand=Plus/Minus
Query 39093 GCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCA 39152
||||||||||||||||| ||| ||| || | || | ||||| | || | || ||
Sbjct 1013 GCCTTGTTGAAGGCGTAGTCGGAGAACGGCAGCAGGATCTCCCAGAGCGTCGCGACCGCG 954
Query 39153 CCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGA 39212
| |||||| |||| ||| | ||||| ||||| | || ||| |||| | ||
Sbjct 953 GCATCCGAGAAGCCGTTGTCGTTCATGCCCTTGCGGAAGCCCTCGTACTGCTTGTCGAG- 895
Query 39213 ACCTCGGGCTTCTTCTT---GCCCATGGCTCGGCGGAGAAGGTCGGCCTGACCCAGGCTG 39269
||||| ||||||||| |||||| || ||||| || | ||||||||| || ||| |
Sbjct 894 --CTCGGACTTCTTCTTCTTGCCCATCGCCCGGCGCAGGATGTCGGCCTGGCCGAGGGAG 837
Query 39270 TACCCAGCGAGGATCTGTGC---CGCCTTCTGCACCTGCTCCTGGTAGATGACCAGCCCG 39326
|||| |||| |||| || |||| | ||||||||||||||||||| ||| |||
Sbjct 836 AACCCGGCGACCTTCTGCGCGATCGCCATG---ACCTGCTCCTGGTAGATGATCAGGCCG 780
Query 39327 TAGGTCGGCCCCAGGATCTCGGCAAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATC 39386
||| | | | ||||| |||| |||||||| ||| ||| |||||||| |||||||||
Sbjct 779 TAGCTGGTCTCCAGGGTCTCCTTGAGCGGCTCGGCCAGCTCCGGGTGGATAGGCGTGATC 720
Query 39387 GCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCACGCCCATCGGACCC 39446
| |||||| ||||||||||| || |||||||| |||||||| | ||||||| || |||
Sbjct 719 GGCTGCTGGCCGTTCTTGCGCAGCGCGTAGTTGATGTGCGAGTTCGCGCCCATGGGGCCC 660
Query 39447 GGACGGTACAGCGCGACGACGGCGCTGATGTCCTCGAAGTTGTCCGGCTTCAGCAGGCGG 39506
|| ||||||||||||| || ||| |||||| ||||||||||| ||||||| || |||
Sbjct 659 GGGCGGTACAGCGCGATGAGGGCCGAGATGTCTTCGAAGTTGTCGGGCTTCATCATGCGC 600
Query 39507 AGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCC 39566
| || |||||||| ||||||||||||||||| || ||||| ||||| | ||
Sbjct 599 ATGAGGCTGCGCATCGGCCCGCCGTCGAGCTGGAACACGCCGAGCGAATCGCCGCGCGCG 540
Query 39567 AGCAGCTCGTAGGTAGCAACGTCGTCCAGCGGGATGTTCTCCAGGTCGACGTGCTCCCCA 39626
||||| ||||||| | |||||| | || || || || || | ||
Sbjct 539 AGCAGGTCGTAGGCGTCGCGGTCGTCGAAGTCGAGGTCTTCGAGCACGGGACGGAAGCCG 480
Query 39627 CGGTTGGCGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGG 39686
||||||| |||||| |||| |||||| | |||||||||||||| || ||||| |||
Sbjct 479 CGGTTGGTCTCGATGTTGTCGAGGGCGTCGTCGATGATCGTGAGGTTGCGCAGCCCCAGG 420
Query 39687 AAGTCCATCTTCACCGCGCCCAGGCTCTCGCACTG-GGGGTAGTCCCACTGCGTCACGGT 39745
||||||||||| | | |||||| ||| | | | ||||||||| |||| || ||| |
Sbjct 419 AAGTCCATCTTGATCAGGCCCAGCGACTC-CGCGGCGGGGTAGTCGAACTGGGTGACGAT 361
Query 39746 CACGCCGTCCGCAGGGCGGACCCACACCGGGAGGTGATCGACCAACGGCTCGTTGGACAT 39805
| ||||||| || | | ||||| | |||| || ||| || |||||
Sbjct 360 CTGGCCGTCCTGCTCCCGCTTCATGATCGGGATGATGTCGATCAGCGGATCCGACGACAT 301
Query 39806 GATCACACCGGCCGCGTGAACGCCCATCTGCCGGACGAGACCTTCGAGCCCGAGCGCAGT 39865
||| || ||||||||||| |||||| ||| || ||||| ||||| |||||||| ||
Sbjct 300 GATGACGCCGGCCGCGTGCACGCCCCACTGGCGCTTCAGACCCTCGAGGCCGAGCGCGGT 241
Query 39866 GTCGATGACCTGCTTCGAGTCCGGGTCGTTCTCGTACAGCCCACGGATCTCGCCCGCCTC 39925
|||| |||| |||||| ||||||||| | ||| | | |||| || |||||||
Sbjct 240 CTCGAAGACCCGCTTCGCATCCGGGTCGCTGTCGATGACGGCGCGGAAGTCCGCCGCCTC 181
Query 39926 GTCGTAGCGCGGGTGCTCCGGGTTGAAGATGCCCTCCAGGGGCATCGAGTTGCCCATCAC 39985
| ||||||| ||||| |||| || |||||| | || || || || |||| |
Sbjct 180 CTTGTAGCGCTCGTGCTTGGGGTCGATGATGCCGGCGAGCGGGATGTCCTTCGCCATGA- 122
Query 39986 GTCGGC-CGGGTA-CGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACG 40043
||||| |||| | ||||||||| ||||||||||| | |||||| | ||||||
Sbjct 121 -TCGGCGCGGGCATCGCCTTGGTGAGCTTCTCGCCCATGCCGAAGGGGAATCCGAGCACG 63
Query 40044 CGCGCCGCGTCCTTCATCGCGTTGCGCGC-CTTGATCCGACCGAAGGTCCCGATCTGTGC 40102
|| | |||||| | ||| ||| || ||||||| ||| |||| ||||||| ||
Sbjct 62 CGGCTGGAGTCCTTGAGCGC-CTGCTTGCTCTTGATCGTGCCGTAGGTGACGATCTGCGC 4
Query 40103 GAC 40105
|||
Sbjct 3 GAC 1
>seq128547
Length=719
Score = 383 bits (424), Expect = 5e-102
Identities = 407/537 (76%), Gaps = 0/537 (0%)
Strand=Plus/Plus
Query 39343 TCTCGGCAAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCGTTCT 39402
|||||| |||||||| ||| ||| ||||||||||| || || || | |||||||
Sbjct 1 TCTCGGACAGCGGCTCGGCCAGCTCCGGGTGGATCGGGACGACCGGCTTGCGGCCGTTCT 60
Query 39403 TGCGGAGGGCGTAGTTCGTGTGCGAGCCCACGCCCATCGGACCCGGACGGTACAGCGCGA 39462
||||| ||||||| | |||||||| | |||||||||||||||| ||||| ||||||
Sbjct 61 TGCGGTGGGCGTACTCGTTGTGCGAGTCGGCGCCCATCGGACCCGGGCGGTAGAGCGCGC 120
Query 39463 CGACGGCGCTGATGTCCTCGAAGTTGTCCGGCTTCAGCAGGCGGAGCAGTGAGCGCATCG 39522
|||||||| |||||||||||||||||| || || | ||| ||||| | ||||||||
Sbjct 121 CGACGGCGGAGATGTCCTCGAAGTTGTCGGGTCGCATCGAGCGCAGCAGCGCGCGCATCG 180
Query 39523 CGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAGGTAG 39582
||||||||||||||||| ||| | |||||||||| |||||||||||||| |||| |
Sbjct 181 GACCGCCGTCGAGCTGGAACACCCCCAACGTGTCGCCCTTGGCCAGCAGCTCGAAGGTCG 240
Query 39583 CAACGTCGTCCAGCGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTTGGCGCGGATGT 39642
| |||||| |||| || || |||||| | ||| || || ||||||| ||||||
Sbjct 241 CCGGGTCGTCGAGCGTGAGGTCTTCCAGGACAACGGTTTCGCCGCGGTTGGACTGGATGT 300
Query 39643 TCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCACCG 39702
|||| | ||||||| | | |||||||||||| || ||||| |||||||||||||| | |
Sbjct 301 TCTCCAACGCGTCGTCGAGGATCGTGAGGTTGCGCAGCCCCAGGAAGTCCATCTTGATCA 360
Query 39703 CGCCCAGGCTCTCGCACTGGGGGTAGTCCCACTGCGTCACGGTCACGCCGTCCGCAGGGC 39762
|| || | ||||||| |||||||| |||| || | | || |||||||| || |
Sbjct 361 GCCCGAGCCGCTCGCACGTCGGGTAGTCGAACTGGGTGATGATCGCGCCGTCCTGCGGCC 420
Query 39763 GGACCCACACCGGGAGGTGATCGACCAACGGCTCGTTGGACATGATCACACCGGCCGCGT 39822
| | | | ||||| | ||||||| ||| ||| |||||||||| || ||||||||||
Sbjct 421 GCATCATGATCGGGATCAGGTCGACCAGCGGATCGCTGGACATGATGACCCCGGCCGCGT 480
Query 39823 GAACGCCCATCTGCCGGACGAGACCTTCGAGCCCGAGCGCAGTGTCGATGACCTGCT 39879
| || ||| ||| || ||||| || || || || ||||||| |||| |||
Sbjct 481 GCACACCCCACTGACGCTTCAGACCCTCCAGGCCCTTGGCGGTGTCGACGACCCGCT 537
>seq139202
Length=3232
Score = 325 bits (360), Expect = 1e-84
Identities = 525/755 (70%), Gaps = 38/755 (5%)
Strand=Plus/Plus
Query 38922 ACGTCGGGCGGCAGGACG-TGAAGTCCCATCCGCCGTGCCTCGCCGAGGTACGTGGCCAT 38980
|||||||||||||| ||| ||| | |||| | || || ||||||| | ||
Sbjct 2089 ACGTCGGGCGGCAGCACGGTGATG-CCCAGCTTGCGACAGTCCGCGAGGTAGATCGCGGC 2147
Query 38981 CTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTG 39040
||||| ||||||||| || ||||||||||||| |||||||| |||||||||||||||
Sbjct 2148 CTTGTCCTTGTCGTCACCGACCGAGGTGAGCAGACCCGCCATGAACTCGGCCGGGTAGTT 2207
Query 39041 CGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGTACGCCGCAGAGTGCGCCTTGTT 39100
| ||| ||||| || || | ||| | | || ||||| || || | ||||| ||||||
Sbjct 2208 GGCCTTGAGGTAGGCGGTCCAGTACGACACCAGGCCGTAGGCGGCGGCGTGCGACTTGTT 2267
Query 39101 GAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCACCGTCCGA 39160
||| ||||| |||||||| || | || ||||||| ||||| ||| || | | |||
Sbjct 2268 GAACGCGTAGCCGGCGAACGGGAGGATGGTCTCCCACAGCGCCTTGATCGCGGCCTTCGA 2327
Query 39161 GTAGCCTCGCTCGCGCGC--TCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCG 39218
| | | || ||||| || ||| || ||| | ||||||||| |||||| ||| |
Sbjct 2328 GAA--CCCGTTCGCGAGCATGCCCGCCTCGAACCCCTCGAACTCCTGGGCCAGGACCGAG 2385
Query 39219 GGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTGACCCAGGCTGTACCCAGCG 39278
| |||||||||||||||||| || ||||| | |||||| | || || ||| || |||
Sbjct 2386 GCCTTCTTCTTGCCCATGGCACGACGGAGGATGTCGGCTCGTCCGAGCGAGTAACCGGCG 2445
Query 39279 AGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGACCAGCCCGTAGGTCGGCCCC 39338
| ||||||| | ||||||| || ||| |||||||| ||
Sbjct 2446 A------------CCTTCTGAGC---GANNTGGTAGACGATCAGACCGTAGGTGTCGCCG 2490
Query 39339 AGGATCTCGGCAAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCG 39398
|||||||| ||||| ||||| | ||||| ||||| ||| ||| | ||| | |||
Sbjct 2491 AGGATCTCCTTGAGCGGTTCCTCGAGTTCGGGATGGATGGGCTTGACCTGCTGACGACCG 2550
Query 39399 TTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCCCACGCCCATCGGACCCGGACGGTACAGC 39458
||||||||| |||||||| |||| | | || ||||||||| || || ||||| ||
Sbjct 2551 TTCTTGCGGTCGGCGTAGTCGTTGTGGGCGTTCATGCCCATCGGCCCGGGGCGGTAGAGG 2610
Query 39459 GCGACGACGGCGCTGATGTCCTCGAAGTTGTCCGGCTTCAGCAGGCGGAGCAGTGAGCGC 39518
||| |||||||| |||||||||||||| | |||| ||| || |||
Sbjct 2611 GCGCCGACGGCGATGATGTCCTCGAAGGCGGTGGGCT---GCATACGTTTCAG------- 2660
Query 39519 ATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAG 39578
| |||||||||||||| || ||| || | || | ||||| ||| ||||||
Sbjct 2661 -------CACCGTCGAGCTGGAACACGCCGAGGGTCTGTCCGCGGGCCAACAGGTCGTAG 2713
Query 39579 GTAGCAACGTCGTCCAGCGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTTGGCGCGG 39638
|| | |||||| ||||| | | |||| |||||||| || |||||| |
Sbjct 2714 GTGGTCGAGTCGTCGAGCGGCAGGGCGTCCATGTCGACGTCGATGCCGCGGTTGTTCGTG 2773
Query 39639 ATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTT 39673
|||||||||| |||||| |||| ||| |||||
Sbjct 2774 ATGTTCTCGAGGGCGTCGTTGATGACCGTCAGGTT 2808
Score = 95.1 bits (104), Expect = 4e-15
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 39745 TCACGCCGTCCGCAGGGCGGACCCACACCGGGAGGTGATCGACCAACGGCTCGTTGGACA 39804
|| |||||||| | ||| ||||||||||| | ||| | ||||||| | ||||
Sbjct 2852 TCGCGCCGTCCTGCGCGCGCTTCCACACCGGGATGGCCTCGGTGAGCGGCTCGCTCGACA 2911
Query 39805 TGATCACACCGGCCGCGTGAACGCCCATCTGCCGGACGAGACCTTCGAGCCCGAGCGCAG 39864
||||||| || ||||| |||||| | |||| || || ||||| ||||| || |
Sbjct 2912 TGATCACCGCGCAGGCGTGCACGCCCGCGTTGCGGATCAGTCCCTCGAGACCGAGTGCGG 2971
Query 39865 TGTCGATGACCTGCTTCGAGTCCGGGTCGTTCTCGTACAGCCCACGGATCTCGCCCGCCT 39924
||||| || || ||| ||| |||||| ||||| |||| |||||| ||| |||||
Sbjct 2972 TGTCGTAGATCTTCTTGACGTCGGGGTCGGTCTCGATCAGCGCACGGACCTCCGACGCCT 3031
Query 39925 CG 39926
||
Sbjct 3032 CG 3033
>seq42003
Length=910
Score = 251 bits (278), Expect = 2e-62
Identities = 483/705 (69%), Gaps = 48/705 (7%)
Strand=Plus/Plus
Query 36674 CTGGAACGCCCCCCAGGTGAGGGGCATGTCCTGATGGAAGAAGTCCTCCATCTTCTCGGC 36733
|||||| ||| | |||||| |||||| | || | | ||||||||| ||||||
Sbjct 146 CTGGAAGGCCGCGTGGGTGAGCGGCATGAGGGGCTGCCAAAGCGCCTCCATCTGCTCGGC 205
Query 36734 GACGATCTCGATCTCCCGCTGCGGGAATGAGGGGAACTTCGAGTTCTCGTCCGTCGTGCG 36793
| | ||||||||||| ||||||||||| |||||||| | ||||| ||||| | |||||||
Sbjct 206 GGCCATCTCGATCTCGCGCTGCGGGAAAGAGGGGAAGTGCGAGTCCTCGTGCTTCGTGCG 265
Query 36794 GAGCGAGAGGAAGTGCATCAGGCTGCGCGCGTTGCAGGTGGCGTAGAAGCTGGTGAAGAT 36853
||||||||||||| ||| || ||||||||| ||| |||| | || | ||||
Sbjct 266 CAGCGAGAGGAAGTTCATGAGCGAGCGCGCGTTCACGGTCACGTACATCGAGGAGTAGAT 325
Query 36854 GCCCACCGGCAGGATCATCCGGGCCACCTCCTTGGCGATGCCGTGCAGGAGCATCGCCTC 36913
||||||||| | ||||| ||||| ||| | ||| |||||| |
Sbjct 326 CGACACCGGCAGCACGGCGCGGGCGACCTCGCGGGCCACACCGGCGTCGAGCATGCGCAG 385
Query 36914 GTA-CTCGCCGTACAGCTCG---GCGTACATGGA----CTCGAAGACGTAGGGGACGAGC 36965
||| ||||| ||| |||| ||| || || |||| |||| |||||
Sbjct 386 GTAGCTCGC-GTAGGCCTCGCTCGCG-ACGCGGCGGCTCTCGGCGACG------ACGAGT 437
Query 36966 CCCTTCTGGAAGCTGGTTCCCGGCTCGAAGGTGTAGGCACCGGGCTTGCCCACCTGCTGG 37025
| | ||| | ||| ||| |||||| |||||| ||||||||||| |||||| |
Sbjct 438 TCGTGCTGCTCGGGGGTGCCCTCTTCGAAGACGTAGGCGCCGGGCTTGCCGACCTGCACG 497
Query 37026 AGGTTGCGGTCAGGGCCGGGCACGTAGAACGTGGGGGCCAGCTCCTTGTACCTTCCCGAC 37085
|| ||| || ||||||||||||||||| ||| ||||| ||| | || |
Sbjct 498 AGACGGCGCTCGGGGCCGGGCACGTAGAAGACGGGACGCAGCTGACGGTAGCGCCCGCTC 557
Query 37086 TCCTCGTTGTAGCTCCAGCCAGCGCGGTGACGGAAGAACTCTCGGGCCACGAAGATCGGG 37145
|||||||||||| || | |||||| || | |||||| ||| |||||||||||
Sbjct 558 TCCTCGTTGTAGG---AGGCGATGCGGTGCCGCATGAACTCGCGGAAGACGAAGATCGGC 614
Query 37146 GCCTCGATGTAGAAGGTGAAGCTGTTGTGCTCGAAGGGCGAGCCGTGCCTGTCCCTCATG 37205
|||| | ||||||||||| |||||||||||||||||||||||| | ||| | |||
Sbjct 615 GCCTGCACGTAGAAGGTGAGCGAGTTGTGCTCGAAGGGCGAGCCGTGGCGGTCGCGCATC 674
Query 37206 AGGAAGTTGATCAGGCCGTCGTCCTTGGTCAGGTCCACGGCCTCG--TCGTGCGAGCCGC 37263
||| ||||||| ||||| | || | |||| |||| |||||| || ||| |||||
Sbjct 675 AGGTAGTTGATGAGGCCCTTGT-CGCGGTC-GGTC----GCCTCGGTTCCGGCG-GCCGC 727
Query 37264 CG-------------ATCGTGCTG-------ACCCGAGCGGCCATGGCCACGTCGGAGTC 37303
|| ||| ||| || || ||||| | ||||||||||||
Sbjct 728 CGCATCCAGCGTCTTCTCGCCCTGGGTCGACACGCGCGCGGCGAACAGCACGTCGGAGTC 787
Query 37304 CTTGGCGCTGGACTTGACCAGCTCGACGGTCACGTCCGAGCGGAA 37348
| ||||| || ||||||||||| |||| || ||||||||
Sbjct 788 GCTCGCGCTCGAGCGCACCAGCTCGACCTTCACATCGGAGCGGAA 832
>seq241813
Length=489
Score = 217 bits (240), Expect = 5e-52
Identities = 255/342 (75%), Gaps = 2/342 (1%)
Strand=Plus/Minus
Query 40968 GGGCATCCCGTGGTGACGATCAGGCCCTCGTTGTGCTCGGCGACCAGGTCGAAGTCCATG 41027
||||| || |||||| |||| | |||||||| ||||||||||| |||||||| |||||||
Sbjct 341 GGGCAGCCGGTGGTGGCGATGATGCCCTCGTGGTGCTCGGCGATCAGGTCGACGTCCATG 282
Query 41028 CGCGGGTACTTCCCGAGCAGGCCCTCCTGGTACGAGCGGGAGCTGAGCTTCATGAGGTTG 41087
|||| |||| |||||| | ||||| ||| |||||| | | | ||| ||
Sbjct 281 CGCGCCCACTTGCCGAGCTGACCCTCGATCGACGCCTTGGAGCTCAAGGTGAAGAGATTC 222
Query 41088 TGCAGGCCGGTCTTGTTCTCCGCGAGGATCGTGAGGTGCGTGTACGCACCGCGACCGCTC 41147
| |||||||||| |||||| |||| ||||| | ||| ||||||||||||| ||||
Sbjct 221 TTCAGGCCGGTCGCGTTCTCGGCGACCATCGTCATGTGGGTGTACGCACCGCTACCGGAG 162
Query 41148 ACGTCGTAACGCTTCTGGTCCTCGGT-GCCCCACTTGACGCGCTCCTGGTCGAAGCGCGA 41206
||||||| | ||||||||| || | ||||||| || |||| |||||| |||||
Sbjct 161 ACGTCGTCGCTCTTCTGGTCG-CGATCGCCCCACAGCACCCGCTTGGTGTCGAACCGCGA 103
Query 41207 GCCCGGAGCCATGTACGCCTCGATGCCGATGATCGGCTTGACCCCAGCGGCCTGAGCCGT 41266
|||| || ||||| |||||||||||||||||||| ||| | ||||| |||
Sbjct 102 CGCCGGCGCGATGTAGGCCTCGATGCCGATGATCGGGGTGATGTCGTGGGCCTTGGCCAC 43
Query 41267 GGTGAAGAAGTCGTGGGCACCGTGCAGGTTGCCGTGGTCAGT 41308
| || |||| ||| ||| ||| || |||||||||||| ||
Sbjct 42 GTTGTAGAACTCGCTGGCGCCGAACATGTTGCCGTGGTCGGT 1
>seq29854
Length=201
Score = 167 bits (184), Expect = 7e-37
Identities = 127/150 (85%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 38960 CTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGGCCGC 39019
|||| ||||||| | |||||||||| |||||||||||| ||||||||||||| || ||
Sbjct 156 CTCGGCGAGGTAGATCGCCATCTTGTCCTTGTCGTCGCCGACCGAGGTGAGCAGCGCGGC 97
Query 39020 CATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGTA 39079
|||||||||||||||||||| || ||| ||||| ||||| | ||||| ||| | |||||
Sbjct 96 CATGTACTCGGCCGGGTAGTTCGCCTTGAGGTAGGCCGTCCAGTAGGAGATCACCCCGTA 37
Query 39080 CGCCGCAGAGTGCGCCTTGTTGAAGGCGTA 39109
|| || ||||||||||||||||| |||||
Sbjct 36 GGCGGCCGAGTGCGCCTTGTTGAACGCGTA 7
>seq29830
Length=640
Score = 154 bits (170), Expect = 5e-33
Identities = 313/461 (68%), Gaps = 23/461 (5%)
Strand=Plus/Plus
Query 38817 TCGGCGATCTCCTGGACCATGCCCTCGCCCACGTTCTTCACGGCGGTCAGCCCGAAGCGG 38876
||| |||||| | ||| | | | ||| ||||| ||| |||||||| |||||||||
Sbjct 199 TCGACGATCTTGTCGACGACGTTGTGGCCGACGTTGCGCACCGCGGTCAGGCCGAAGCGG 258
Query 38877 ATCTCCGTCTTC-CCGTTCGGGGTGAAGGAGCTGTTC-GAGACCGACACGTCGGGCGGCA 38934
| |||| | ||| |||||||||| ||| | || | ||||||||||| |
Sbjct 259 A----CGTCGTGGCCGACCGGGGTGAAGTT-CTGCGCCGACTCGTTGACGTCGGGCGGGA 313
Query 38935 GGACGTGAAGTCCCATCCGCCGTGCCTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGT 38994
| || || | |||||| || |||| |||||| | ||| ||||| |||||||
Sbjct 314 GCACCTGGATCTTCATCCGGCGGCACTCGTTGAGGTAGATCGCCGACTTGTCCTTGTCGC 373
Query 38995 CGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACG 39054
| |||||||| |||| || |||||||||||||||||||||| | ||| ||| |||
Sbjct 374 CCTTGACCGAGGTCAGCAGCGCGGCCATGTACTCGGCCGGGTAGTTGGCCTTGAGGAACG 433
Query 39055 CCGTGCGGTAGGCGATGAGACCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGG 39114
|||| | ||| | | | ||||||||||| ||||| ||||||| |
Sbjct 434 CCGTCCAGTACGACAGCACGCCGTACGCCGCGGAGTGGGCCTTGT--------------G 479
Query 39115 CGAAGGGTACGAGCACGTCCCACACCGCCTGGATGGCACCGTCCGAGTAGCC-TCGCTCG 39173
||| || | || | ||||||| || ||| || | | |||||||| | || ||
Sbjct 480 AGAACGGCAGCAGGATCTCCCACAGCGTGGTGATCGCCGCCTGGGAGTAGCCGTTGC-CG 538
Query 39174 CGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCC 39233
|| || |||||| || ||| |||| | || |||| |||||||||||||
Sbjct 539 AGCATGCCGGACTGGAACCCGGCGTACTGCTTGTCGAGCTCCTCCTTCTTCTTCTTGCCC 598
Query 39234 ATGGCTCGGCGGAGAAGGTCGGCCTGACCCAGGCTGTACCC 39274
||||| || || || ||||||||| || |||||| ||||
Sbjct 599 ATGGCGCGACGCAGGTTGTCGGCCTGGCCGAGGCTGAACCC 639
>seq225334
Length=248
Score = 152 bits (168), Expect = 2e-32
Identities = 177/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 39975 TTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTG 40034
||||||||||| ||||| | |||| || | ||||| | | ||| || | |
Sbjct 10 TTGCCCATCACCGGCGCCGGCATCACCTTCGTGATGCGGTCGCCCATCGAGAACGGGTAG 69
Query 40035 TCCAGCACGCGCGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGACCGAAGGTCCCG 40094
|||||||||| | |||||||| | ||| | ||||||||| ||| |||| ||
Sbjct 70 CCCAGCACGCGGGAGGCGTCCTTGACCGCCTGCTTGGCCTTGATCGTGCCGTAGGTGACG 129
Query 40095 ATCTGTGCGACCTTGTCCGCCCCGTACTTCTCGGTGACGTACCTGATCACGTCGCCCCGT 40154
||||| ||||| ||| | |||||||||||||||||||| | |||||| ||||| ||
Sbjct 130 ATCTGCGCGACGCGGTCGTCGCCGTACTTCTCGGTGACGTAGCGGATCACCTCGCCGCGC 189
Query 40155 CGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAA 40213
|| || || |||||||||| ||| | ||||||||| || ||||| |||||||| |||||
Sbjct 190 CGACGCTCGTCGAAGTCGACGTCGAAGTCGGGCATCGAGACGCGGTCGGGGTTGAGGAA 248
>seq164420
Length=283
Score = 150 bits (166), Expect = 6e-32
Identities = 192/263 (73%), Gaps = 6/263 (2%)
Strand=Plus/Minus
Query 39885 TCCGGGTCGTTCTCGTACAGCCCACGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCC 39944
||||| ||| | |||| || | |||| |||||| || ||| |||||||| ||||||
Sbjct 261 TCCGGCTCGCTGTCGTGCATGGCGCGGAACTCGCCGGCGTCGGCGTAGCGCTTGTGCTCG 202
Query 39945 GGGTTGAAGATGCCCTCCAGGGGCATCGAGTTGCCCATCACGTCGGCCGGGTACGCCTTG 40004
| |||||| || ||| || || | ||||||||||||||||| || |||||||
Sbjct 201 GAGTTGAACATCTCCTTGAGCGGGACGCCCTTGCCCATCACGTCGGCGGGCATCGCCTTG 142
Query 40005 GTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGCGCCGCGTCCTTCATCGCG 40064
|| | | ||| || ||| |||| |||||| ||||||||||| |||||||| |||||
Sbjct 141 GTGATCCGCTCCCCCACCGCGAAGCCCTTGTCGAGCACGCGCGCGGCGTCCTTGATCGCC 82
Query 40065 ---TTGCGCGCCTTGATCCGACCGAAGGTCCCGATCTGTGCGACCTTGTCCGCCCCGTAC 40121
||| | ||| | ||| ||||| ||| ||||| ||||| ||| | ||||||
Sbjct 81 GCCTTG---GACTTCAGCCGGCCGAACGTCGCGATCATGGCGACTCGGTCGGTGCCGTAC 25
Query 40122 TTCTCGGTGACGTACCTGATCAC 40144
|| ||||||||||| | ||| ||
Sbjct 24 TTGTCGGTGACGTAGCGGATGAC 2
>seq107507
Length=461
Score = 136 bits (150), Expect = 1e-27
Identities = 316/486 (65%), Gaps = 28/486 (6%)
Strand=Plus/Plus
Query 39533 GAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAGGTAGCAACGTCGTC 39592
|||||||||||| ||||||||| || | ||| ||| |||| | | ||| ||
Sbjct 1 GAGCTGGAAGACGCCGAGCGTGTCACCGCGCTGCAGGAGCGCGTACGCCTCGGGGTCCTC 60
Query 39593 CAGCGGGATGTTCTCCAGGTCGACGTGCTCC---CCACGGTTGGCGCGGATGTTCTCGAC 39649
||| ||| |||| ||||||| |||| || ||||| | |||||| ||||
Sbjct 61 GAGCCCCATGGTCTCGAGGTCGA---GCTCGATGCCGCGGTTCGTCTTGATGTTGTCGAG 117
Query 39650 CGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCACCGCGCCCAG 39709
||||| | |||||||||||||| |||||||| |||||||||||||| |
Sbjct 118 GGCGTCACTGATGATCGTGAGGTTGCGGAGCCCCAGGAAGTCCATCTTGATNNNNNNNNN 177
Query 39710 GCTCTCGCACTGGGGGTAGTCCCACTGCGTCACGGTCACGCCGTCCGCAGGGCGGACCCA 39769
| | ||| || ||||||| || |
Sbjct 178 NNNNNNG----------------------TGACGATCTGGCCGTCCTGCTCCCGCTTCAT 215
Query 39770 CACCGGGAGGTGATCGACCAACGGCTCGTTGGACATGATCACACCGGCCGCGTGAACGCC 39829
| ||||| | |||| || ||| ||| | |||||||| || ||||||||||| |||||
Sbjct 216 GATCGGGATGATGTCGATCAGCGGGTCGCTCGACATGATGACGCCGGCCGCGTGCACGCC 275
Query 39830 CATCTGCCGGACGAGACCTTCGAGCCCGAGCGCAGTGTCGATGACCTGCTTCGAGTCCGG 39889
| ||| || || || |||||||||||||| ||||||| ||| ||| | |||||
Sbjct 276 CCACTGGCGCTTCAGCCCCTCGAGCCCGAGCGCGGTGTCGAACACCGTCTTGGCTTCCGG 335
Query 39890 GTCGTTCTCGTACAGCCCACGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCCGGGTT 39949
|||| ||||| | |||| ||| | || || | |||||||||||| | | ||
Sbjct 336 GTCGGTCTCGACGACGGTGCGGACGTCGACGGCTTCCTTGTAGCGCGGGTGGTTCTTGTC 395
Query 39950 GAAGATGCCCTCCAGGGGCATCGAGTTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAG 40009
|||||| || ||| || || |||||||||||| | ||| ||||||||| ||
Sbjct 396 GAAGATCCCGGTCAGCGGGATGTCCTTGCCCATCACGGGCGGCGGCATCGCCTTGGTGAG 455
Query 40010 CTTCTC 40015
||||||
Sbjct 456 CTTCTC 461
>seq4597
Length=157418
Score = 125 bits (138), Expect = 2e-24
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 33055 CGAGGCCATGGAGATCGACCACGCCATCGCGGAGTGCGTCGTCTCGGGTGGCGTCCGGCG 33114
|||||||||| |||||||||||| |||||||| | ||||||| | ||||| | || ||
Sbjct 124592 CGAGGCCATGCAGATCGACCACGACATCGCGGCATCCGTCGTCGCAGGTGGTGCACGTCG 124533
Query 33115 CTCGGCTCGCATGGCCATCGTGAAGTGGGACGACCCCTTCATCGAGGACTTCCTCGCGTG 33174
|| || || ||||| || || ||||||||||| || |||||| || ||
Sbjct 124532 GTCCGCGCGTATGGCAATGATGGTCTGGGACGACCCGGAAGTCTTCGACTTCATCAACTG 124473
Query 33175 CAAGCACGACATGTCGAAGCACTGGACGACGAACATCTCGGTCGAGATCGACTACCGCTT 33234
|||| |||| ||| | |||||||| ||||||||||| |||||| | ||| |||| ||
Sbjct 124472 CAAGGCCGACTGGTCCACTCACTGGACCACGAACATCTCCGTCGAGGTAGACGACCGGTT 124413
Query 33235 CATGAAGGC 33243
|| |||||
Sbjct 124412 CACCAAGGC 124404
Score = 82.4 bits (90), Expect = 2e-11
Identities = 116/163 (71%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 44374 ACCACCTGTCACCGCAGCAAGAGCAGTCGCCCTCGCCGTCGAAGTACAGGCCGATCACCT 44433
|||| | ||| || ||||| || ||||| ||||||||||| |||||||||| ||
Sbjct 69978 ACCAGCGGTCGCCACAGCAGCGACAATCGCCGCGACCGTCGAAGTAGAGGCCGATCAGCT 70037
Query 44434 CGGCCTTGGCGTTGGCCTCGATGGCGGAGTCAGCCTCGATGATCACGTAGTGGGAGATAC 44493
||||| || ||| |||| || ||||| || |||||| ||||| | ||| | |
Sbjct 70038 CGGCCCTGTTGTTCGCCTGCTCGGACGAGTCGGCTTCGATGTACACGTGGACGGAAAGCC 70097
Query 44494 CAGCCGAGTGGTCCCGGTCGAACGATCCACCGGAGTTGTTCTG 44536
|| | | ||| | |||||||||| || |||||||||||
Sbjct 70098 CACGCTCGGCGTCGAAGACGAACGATCCGCCCGAGTTGTTCTG 70140
>seq254749
Length=541
Score = 122 bits (134), Expect = 3e-23
Identities = 114/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 40206 TTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGG 40265
|| ||||||||||||||||| ||||||||| | | |||| |||||| ||||| | |
Sbjct 1 TTGAGGAACCGCTCGAAGATCAGCCCGTGCTGCAACGGGTTCAGGTCGGTGATCCGCATC 60
Query 40266 CAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTC 40325
|||||| |||| ||| ||||| | ||||| || ||||| ||||||| | ||||||
Sbjct 61 GCGTAGGCCACCATCGAGCCGGCGCCGGAGCCGCGGCCGGGGCCGACCCTGATGCCGTTG 120
Query 40326 TCCTTGGCCCAGCCGATGAAGTCGG 40350
| |||||||||| |||||||||||
Sbjct 121 TTCTTGGCCCAGTTGATGAAGTCGG 145
>seq244733
Length=755
Score = 109 bits (120), Expect = 2e-19
Identities = 209/305 (69%), Gaps = 6/305 (2%)
Strand=Plus/Minus
Query 40638 GCGGCCGACTTGATGTAGTACCCGGAGCCCTCGAACCGGAAGCGGTTCGGGTTGTCGATC 40697
|| || |||||||||||||| ||| ||| |||||| | ||||| | || | || |
Sbjct 529 GCCGCGGACTTGATGTAGTAGCCGCCGCCGTCGAACTTCAGCCGGTTGGTGTCGGAGAGC 470
Query 40698 GTCGTGCCGGTCTGGACGCAGAGCAGAGCGTCGTGCGCGGTGCTCTCCTCGGCCGTGACG 40757
| |||| | | || ||||| || ||||| ||||| | | ||||| | || |
Sbjct 469 CGCTTGCCCGACGCGATGCAGATGAGGGCGTCCTGCGCCGCGGCGTCCTCAGGGTTGTTG 410
Query 40758 TAGTGCGAGTCGTTCGTGACCACGGGGGTGAGCGCGAGGTGCTTGCCCAGCCGGTAGAGG 40817
|||||||||||||| || ||| || | || | || | ||||| ||||| |||
Sbjct 409 TAGTGCGAGTCGTTGGTCGCCAGCGGCGGGATGCCCAGCTCCTTGCTGAGCCGCAGCAGG 350
Query 40818 TCGTCGCGGACACGCCGCTCGATCTCCAGGCCGTGGTCCATGATCTCCAGGAAGTACCGG 40877
|| | || || || |||||| || || ||||||||||| | ||| |||||| | | |
Sbjct 349 TCCTGACGCACGCGGTTCTCGATGTCGAGACCGTGGTCCATCAGCTCGAGGAAGAAGCTG 290
Query 40878 TCCCGACCGAAGACCTCCAGGTA--CCG-GCCAGCCTCGGCAACGGCCTCGTCGTACTGC 40934
||| ||||||| ||| || | ||| | | |||| |||||||||||||||
Sbjct 289 TCCTTGCCGAAGATGTCCTGGAACTCCGCGGCGGCCT---TCTTGGCCTCGTCGTACTGG 233
Query 40935 CCGAG 40939
|||||
Sbjct 232 CCGAG 228
>seq172122
Length=744
Score = 104 bits (114), Expect = 7e-18
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 40280 CGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCC 40339
||| ||||| |||| ||||| || || |||||| | ||||| ||||| |||||
Sbjct 2 CGAGCCGGCGCCCGAACCACGGCCCGGGCCGACCGGAATGCCGTGATCCTTCGCCCATTT 61
Query 40340 GATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAACCCCAGCTGGATGATCATGTCGAT 40399
||||||||||||||||| |||||| ||| ||||| |||| ||||| ||||| |||||
Sbjct 62 GATGAAGTCGGCGACGATCAGGAAATAGCCGGGGAAGCCCATCTGGACGATCACGTCGAC 121
Query 40400 CTCGTACTGAAGCTGCTTGC 40419
|||| || || ||||||
Sbjct 122 CTCGAACGCGAGGCGCTTGC 141
>seq205449
Length=431
Score = 100 bits (110), Expect = 9e-17
Identities = 260/388 (67%), Gaps = 30/388 (8%)
Strand=Plus/Minus
Query 39223 TCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTGACCCAGGCTGTACCCAGCGAGGA 39282
|||||||||||||||| |||||||| | |||||||| || || |||| || || ||||
Sbjct 377 TCTTCTTGCCCATGGCGCGGCGGAGCATGTCGGCCTCGCCGAGCGTGTAGCCGGCCAGGA 318
Query 39283 TCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGACCAGCCCGTAGGTCGGCCCCAGGA 39342
|| ||| ||| | |||||| |||||||||| || | ||| ||||| || ||| |
Sbjct 317 CCTTGGCCACCTCCATCACCTGTTCCTGGTAGACGATGATGCCGAAGGTCTCCCGCAGCA 258
Query 39343 TCTCGGCAAG---CGGCTCC----TCCACCTCG--GGGTGGATCGGCGTGATCGCCTGCT 39393
|| | || ||| ||| ||| ||| || | ||||| ||||
Sbjct 257 TCGGCTCCAGCTTCGGGTCCGGGTACCAGGTCGCCTCGTTG-CCGGCG---TCGC----- 207
Query 39394 GCCCGTTCTTGCGGAGGGCGTAGTTCGTG-TGCGAGCCCACGCCCATCGGACCCGGACGG 39452
| ||| |||||| | |||| || | || | ||||||| ||||| |||
Sbjct 206 GGCCGAGCTTGCGCTCGCAGTAGACCGGGATG-------TTGGCCATCGGGCCCGGCCGG 154
Query 39453 TACAGCGCGACGACGGCGCTGATGTCCTCGAAGTTGTCCGGCTTCAGCAGGCGGAGCAGT 39512
|| ||||| || | |||| |||||||||||||| ||| | || || | || ||||
Sbjct 153 TAGAGCGCCACCAGGGCGATGATGTCCTCGAAGCGGTCGGCCTGCATCTCGCAGAGCGCC 94
Query 39513 GAGCGCATCGCGCCGCCG--TCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCA 39570
|||||| || | |||| || | |||||| || || ||| ||||||| | ||| |
Sbjct 93 TTGCGCAT-GC-CGGCCGATTCCACCTGGAACACGCCGACCGTCTCGCCCCGGCCCATCG 36
Query 39571 GCTCGTAGGTAGCAACGTCGTCCAGCGG 39598
|| ||||||| |||| || |||||
Sbjct 35 GCCCGTAGGTTTTTTCGTCATCGAGCGG 8
>seq267958
Length=405
Score = 87.8 bits (96), Expect = 6e-13
Identities = 129/175 (74%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 41223 GCCTCGATGCCGATGATCGGCTTGACCCCAGCGGCCTGAGCCGTGGTGAAGAAGTCGTGG 41282
||||| |||||||||||||||||||| || || || | ||| ||| | ||||||||| |
Sbjct 233 GCCTCCATGCCGATGATCGGCTTGACGCCGGCCGCGTTGGCCTTGGAGTAGAAGTCGTAG 292
Query 41283 GCACCGTGCAGGTTGCCGTGGTCAGTGACTGCGACTGCCGGGGAGCCC-TGTCGGGCAAC 41341
|||||| | |||||||||||| || | || | || || |||| | || ||| |
Sbjct 293 GCACCGAAGACGTTGCCGTGGTCGGTCATCGCCAGCGCGGGCATGCCCATCTC-GGCGGC 351
Query 41342 CTCGGC-GACCA-TTTGCTTCATCCGAGCGGCCCCGTCGAGGAGCGAGTACTCGG 41394
| |||| || || ||| || || || || |||||||| | |||||||||||
Sbjct 352 C-CGGCTGAACAGGCTGC-CCAGGCGGGCTGCTCCGTCGAGCATCGAGTACTCGG 404
>seq207833
Length=581
Score = 82.4 bits (90), Expect = 2e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 38489 CTCCAGCCCGGCAAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 38548
||| |||||||| ||||||||||||||||||||||| || |||||||| |||||| |
Sbjct 213 CTCGAGCCCGGCCAGCGGGTGGTCGGAGACGTACAGCCCGAGCATCTCGCGCTCGTGGCC 154
Query 38549 GAGAAGCGGACCCTTCGCCCAGTCCTCG 38576
||| |||| |||| |||| || |||
Sbjct 153 GAGCAGCGTCACCTTGTCCCACTCGTCG 126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159613879017224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |