Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq243462 114 2e-20 seq270463 107 3e-18 seq47396 93.3 7e-14 seq76033 91.5 2e-13 >seq243462 Length=264 Score = 114 bits (126), Expect = 2e-20 Identities = 154/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 201833 GGGGATGTAAAAG-CCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGAT 201891 ||||| | | ||| |||| || |||||||| |||||| || ||||| | |||||| Sbjct 214 GGGGACGGACAAGTCCGATCGCACCGGTACCGGCACCAGGAGCGTGTTCGGGCACCAGAT 155 Query 201892 GCGCTTTAACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTC 201951 ||| || || | || || || |||||||||||||| || ||||| ||||| || || Sbjct 154 GCGGTTCGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAGAAGGTGCACCTGCGGTC 95 Query 201952 AATCATCCATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGA 202011 | ||| ||||||||||||||||| || || |||||| ||| | || | || Sbjct 94 GGTGATCGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAACGTCCGCTGGCTGCAGGA 35 Query 202012 CAACAACGTCACCATCTGGGACGAATGGGCGGA 202044 | ||| || |||||||||||||||||||| Sbjct 34 GCGCGGCGTGACGATCTGGGACGAATGGGCGGA 2 >seq270463 Length=280 Score = 107 bits (118), Expect = 3e-18 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 201805 GGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAG-CCGACCGTACCGGTACGG 201863 |||| | ||||| || || | ||| | |||| | | ||| ||||||| ||||| || | Sbjct 39 GGACCTGCTGCGCGACGTGCTCGAGA-CGGGCACGCCCAAGGCCGACCGCACCGGCACCG 97 Query 201864 GCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGAAGGTTTTCCGCTGG 201923 | |||| | || ||||| |||||| | || | || | || ||||| |||||| Sbjct 98 GGACCCGCAGCGTCTTCGGGCGCCAGCTCCGGTACGACCTCTCCGAGGGTTTCCCGCTGA 157 Query 201924 TCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTGTGGTTCCTCATGG 201983 |||||||||| ||| || || || ||| || | |||||||| ||||||||| | Sbjct 158 TCACCACCAAGCGGGTGCATCTCAAGTCGATCGTCTACGAGCTGCTCTGGTTCCTCCGTG 217 Query 201984 GTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGGGACGAATGGGCGG 202043 | ||| | ||| | |||| || | || || |||||||||||||||||| ||||| | Sbjct 218 GCGACTCGAACGTGCAGTGGCTGCAGGATCACGGCGTCACCATCTGGGACGAGTGGGCCG 277 Query 202044 A 202044 | Sbjct 278 A 278 >seq47396 Length=7053 Score = 93.3 bits (102), Expect = 7e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 614 GGGGAGTAGTTCAACTGGTAGAGCGTCGGTCTCCAAAACCGAATGTTGCAGGTTCGAGTC 673 |||| |||| |||||||| ||||| ||||||||||||||| | ||||||||||| |||| Sbjct 4054 GGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTC 4113 Query 674 CTGTCTCCCCTGCC 687 ||||| |||||||| Sbjct 4114 CTGTCGCCCCTGCC 4127 >seq76033 Length=7108 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549 || || || |||||||||||||| ||||| ||| ||||||| || || ||||| |||||| Sbjct 6367 CTCTCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATC 6426 Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAGGCGAACATGGCGGTAGGCGAC 202609 ||||| || ||| |||| |||||| | || ||||| | | | ||| || || Sbjct 6427 GCGTCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAG 6486 Query 202610 TTCGTCTGGACAGGTGGTGA 202629 ||||| ||||| || || || Sbjct 6487 TTCGTGTGGACCGGCGGGGA 6506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785273921366680