Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031112.1
Length=59265
Score E
Sequences producing significant alignments: (Bits) Value
seq232712 223 1e-53
seq222324 159 1e-34
seq148523 109 2e-19
>seq232712
Length=770
Score = 223 bits (246), Expect = 1e-53
Identities = 207/261 (79%), Gaps = 4/261 (2%)
Strand=Plus/Minus
Query 3035 TCACCGCCGGCA-CCCGCTCGGGCCTGTGGTCACACATGGCCGAGGCGATCAATCAGCTG 3093
|||||| ||| ||||| || |||||| | |||||| | || |||| || ||
Sbjct 259 TCACCGGCGGGTTCCCGC---GGTCTGTGGGCGCACATGCACACCGCCATCACCCACCTC 203
Query 3094 CGACCCCGCTGGGTCGTCATCGAGAACGTGAGAGGACTGCTCAGTGCCACAGCACATCGC 3153
||||| |||| || |||||||| || || || || |||||||||||| ||| ||||||
Sbjct 202 CGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGCCCGAGCCCATCGC 143
Query 3154 CCGATGGAATCCGAGCCGGATGCTCTGGGAGACCGAGACACTCAGCCTGTTCTCCGCGCA 3213
|| ||||||||||| || ||| ||||||||||| ||| ||| ||||||||||| |||
Sbjct 142 CCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACCTGTTCTCCGAGCA 83
Query 3214 CTCGGAGCCGTACTCGGCGACCTTGCCGACCTCGGGTATGACGCGCAATGGTGCACTGTT 3273
||||||||||||||||| |||||| ||||| |||||||||||||||| ||| |||||||
Sbjct 82 CTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCAGTGGGTCACTGTT 23
Query 3274 GCCGCTGCCGACGTCGGCGCC 3294
|||| ||| ||||| ||||
Sbjct 22 CCCGCCTCCGCCGTCGACGCC 2
Score = 150 bits (166), Expect = 7e-32
Identities = 162/212 (76%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 2786 TGAGGGTCGGGTCACTATTCAGCGGGTACGGCGGGCTCGACCTCGCCGTATCCGCTGCT- 2844
||||| |||| ||||| ||| ||||||||||| ||||||||||| || | | | |
Sbjct 454 TGAGGATCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGC-GTGTGAGGCGTTC 396
Query 2845 TTCGGTGCATCGACAGCATGGTTCGTCGAGTTCGAGAAAGCACCCTCACGCATCCTCGCC 2904
|||||||| |||| |||||| || ||| |||| || | || || |||||||||
Sbjct 395 TTCGGTGCGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCC 336
Query 2905 CACCATTGGCCCGACGTGCCGAACCTCGGCGACGTGACCGCTGTCGACTGGTCGCAGGTC 2964
||||| ||||| ||||||||||| ||||||| | ||||| |||||||| | ||||
Sbjct 335 CACCACTGGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTC 276
Query 2965 GAACCGGTCGACGTGCTGACGGGCGGGTTCCC 2996
||||| || |||||| | || |||||||||||
Sbjct 275 GAACCAGTGGACGTGATCACCGGCGGGTTCCC 244
>seq222324
Length=1056
Score = 159 bits (176), Expect = 1e-34
Identities = 256/359 (71%), Gaps = 23/359 (6%)
Strand=Plus/Minus
Query 36835 CACCGTCGAGAACGTGCCCGTCGGCGAGGGATCGTGGTCGGCGGCCGACGCGAACAACGT 36894
||||||||||| ||| || | |||||| |||||||||||| | || || ||| || |
Sbjct 971 CACCGTCGAGATCGTTCCGCCCAACGAGGGTTCGTGGTCGGCGTCTGAAGCCAACGACAT 912
Query 36895 CGCGTTTCACCTGTGTTTCGCGGGGTCGTTCGCCGAGTGGTCGCGCGGCCGATGGCT-GT 36953
||| | |||||||| |||| |||||||||||||||||||||||||| | ||||| |
Sbjct 911 CGCCTACCACCTGTGCATCGCTGGGTCGTTCGCCGAGTGGTCGCGCGGGCAGTGGCTCGA 852
Query 36954 CGG--CCGACGCATC---CGACGGACTCAACGAAGA---CGCGATGATGTGGCGCGGCGC 37005
||| ||||| || ||||||||| ||| || |||||| | || ||||||
Sbjct 851 CGGGATCGACGACTCCGGCGACGGACTGTCCGAGGATCTCGCGATCACCCGG-GCGGCG- 794
Query 37006 CAAGGCCATGGCCGCCGCATGTCAGCAGTTCGGGTTCCCCGCCAAGGCGGTCGGCTCGCT 37065
||||| ||||||||||| | |||||||||| |||||| | || | ||| |||
Sbjct 793 -AAGGCAATGGCCGCCGCGTCGCAGCAGTTCGAGTTCCCGCTCGAGTACGCCGGATCGAA 735
Query 37066 GCGCTACGCAGACAACAACTGGCCGCCCGAGCC--AGGTATCTGCGGGC--ACGTGTCGT 37121
|| ||| | |||||||| | || ||| | |||| || | | |
Sbjct 734 CGGCACCGCGG------GCTGGCCGCTGAAACCGAAGGGCGTCGTGGGCCATCGCGAC-T 682
Query 37122 TCGGCCGTCGCGGCGGCGGCCACACCGACCCGGGCGTCAACTTCCCCATGGACGAGTTC 37180
|||| ||||||||| |||||||||||||||| | |||||||||||||||||||
Sbjct 681 TCGGTGCCCGCGGCGGCAACCACACCGACCCGGGCAACGGCTTCCCCATGGACGAGTTC 623
>seq148523
Length=1916
Score = 109 bits (120), Expect = 2e-19
Identities = 124/164 (76%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 4138 CCGACCGAGCTGAACCGCAACCAAAAGCCACGTCTCAACGCCGCGTTCGCCGAGTGGATG 4197
|||||||| | |||| ||| || || || || ||| |||| | || ||||||
Sbjct 556 CCGACCGAACCGAACACCAAGGGCAACCCCCGGCTGTCCGCGCTGTTCCCGGAATGGATG 615
Query 4198 ATGATGCTGCCCGCGGGGCACGTCACCGACCCCGCGATCGGGCTGTCGCGCAGCGACCAG 4257
||| | || | ||| || |||||||||||||| ||||||||| | |||| ||| |||
Sbjct 616 ATGTTCCTCCGCGCCGGCTGGGTCACCGACCCCGCCATCGGGCTGACCCGCAACGAGCAG 675
Query 4258 CTCAAGGCGATCGGTAACGGCGT-GTGCCCGCCGCAGGCGTACG 4300
|||||||| ||||| ||||| || ||| ||||||||||||| ||
Sbjct 676 CTCAAGGCCATCGGCAACGGTGTCGTG-CCGCCGCAGGCGTTCG 718
Score = 84.2 bits (92), Expect = 8e-12
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 3330 TCCTGCCGACGCCGCGCGCGACGGACGGGACGAAAGGCGGCCCGAATCAGCGTGGCTCGT 3389
|| |||||||||| || ||| | ||||| ||||||||||| ||||| ||||| || ||||
Sbjct 327 TCATGCCGACGCCACGGGCGTCCGACGGCACGAAAGGCGGACCGAACCAGCGGGGGTCGT 386
Query 3390 CGGGCGACCTGATGCTGCC 3408
| || ||||| ||||||||
Sbjct 387 CCGGAGACCTCATGCTGCC 405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 188902789796042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |