Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031118.1
Length=54167
Score E
Sequences producing significant alignments: (Bits) Value
seq139601 773 0.0
seq138558 389 1e-103
seq13656 251 2e-62
seq139445 208 3e-49
seq46609 203 1e-47
seq204283 165 3e-36
seq219746 140 1e-28
seq191774 138 4e-28
seq184310 100 1e-16
seq259555 98.7 3e-16
seq235553 98.7 3e-16
seq136770 82.4 3e-11
>seq139601
Length=1978
Score = 773 bits (856), Expect = 0.0
Identities = 1235/1755 (70%), Gaps = 47/1755 (3%)
Strand=Plus/Minus
Query 15673 CACGCATGACCCGGATGAGGCAGCACTTAAGACCGGCCGCGAGGTTCGCCGCGCGACCCG 15732
||| || ||||| || ||||| ||| |||||||| |||| ||| |||| || | ||
Sbjct 1732 CACCCACGACCCAGACGAGGCGGCAGCCAAGACCGGTCGCGCGGTGCGCCAGGCATCGCG 1673
Query 15733 GTCCGAACAACTCGTGGGCGGGTGGGGATGAACAACCGCG-CAGTCCTGACCGATCACAC 15791
||| || || || || || | || ||| || | || | | ||||||||||||||
Sbjct 1672 GTCTGATGCGCTGGTCGGTGGCCGCGGGTGA-CACCGACGTCGGGGCTGACCGATCACAC 1614
Query 15792 GATCGTCGAGTGGATCTCGCCGAAGGGCGAACGCGTCCGCCTATCGGGTGCGAAGAAGAC 15851
|||| ||||||||||| | || ||| | || | || || || || |||||| |||
Sbjct 1613 GATCATCGAGTGGATCGCCACGTCGGGGTATCGGCTACGGCTGTCCGGGGCGAAG--GAC 1556
Query 15852 CGCACCACCCGAACTCGGTGCGTGGCT-GTCCACGGGCGGGATCGACGGCATCGGGCACC 15910
|||| || ||||| ||||||| | || | | || |||| ||| |||| |
Sbjct 1555 GTCACC----GAGCTCGGGACGTGGCTCGATCAGGAG-GGCATCGTCGGTGCCGGGTTCG 1501
Query 15911 TCGACGTGAAGGCGCTGTTCGATGCCGCCGCCCGCCAGTGGGGCGAGGACTACGTCGGCG 15970
|||||| |||||| ||||||| |||||||||||||||||||| ||| |||||||||
Sbjct 1500 TCGACGAGAAGGCCATGTTCGACGCCGCCGCCCGCCAGTGGGGTGAGACCTACGTCGGGA 1441
Query 15971 AGACCCTCGACCACGCGGAACTCGATGTGCCGCTGTTCATCCTCGGCGCCAACCCGGACG 16030
|| |||||||| || || |||| |||||||||||| | ||||| || |||| ||||
Sbjct 1440 CAACGCTCGACCATGCCGAGTTCGAGGTGCCGCTGTTCGTTCTCGGTTCCGACCCTGACG 1381
Query 16031 ACTTCCGACGCCGCGTCGAGCACCTGCGGACCCTCATCCGCCGGCACGAGGTCGGGTGGC 16090
||||||| || ||||| |||||||||| | || |||||||| || | || ||||
Sbjct 1380 ACTTCCGGCGGCGCGTGGAGCACCTGCAGCAGCTGATCCGCCGCGACACCGCTGGATGGC 1321
Query 16091 TCGCGGTGTACACCAACTCCACCGGGTGGAGGTGGGTCGCCGCTCGCCTCGGCTACCTGA 16150
| | | |||||||| | | || |||||| ||||||| || || | ||| | |||
Sbjct 1320 TGGTGTCGTACACCACCGCGACGGGGTGGCGGTGGGTGCAGGCGCGGCGCGGGCATCTGC 1261
Query 16151 AGCCGACGTTCCCCTTCGACCCGAGCAGGACGTCGGCCGCCAACTACGAACTGATGCTGA 16210
| ||| |||||||| | ||||||||| || ||| ||| ||||||||||
Sbjct 1260 GGTCGATCGAGAAGATCGACCCGCGGCTGACGTCGGCGGCGCACTTCGAGCTGATGCTGA 1201
Query 16211 TCGTCGAGCATCCGATCCCGCG---GGCCGCCGATCACGCCGACTCGTGGAAGAACACGA 16267
|||||||| || ||||||| ||| |||| |||| |||||||| ||| |
Sbjct 1200 TCGTCGAGTTGCCCATCCCGCAAGAGGCACCCGACCACG---ACTCGTGGGTGAAGGCAT 1144
Query 16268 CCAACACGGGCAAGGGGTCGGTGTCGATCTACCCGGGCCCGCTGTGGCAGGCGTGGCCGC 16327
|| ||||| || | | | | || || || ||| || | |||||| |
Sbjct 1143 CCGGGCCGGGCCGCGGTGAGCTCGCCCTGTATCCCGGGCCGTACCGGATCGGGTGGCCAC 1084
Query 16328 AGTTCGCGTTCCAGGGCCCGGGACGGTTNNNNNNNNNNTACGCCGGCAACGACGTCGACC 16387
|||| || | | ||||| ||| || | ||||||||||||||||
Sbjct 1083 GGTTCACGATGCGCGGCCCCGGAGTATTCCGGATCGTGTTCGCCGGCAACGACGTCA--- 1027
Query 16388 ACCCGTTCACCGTTCTCG---CGGGCGAGACGATCCTGATCAACACCGACGAGGCGCGCC 16444
||||| ||| || | | |||||| | | || |||||||||| |||||||| |
Sbjct 1026 ---CGTTCCCCGCGCTGGTCCCCGGCGAGGTGGTGCTCGTCAACACCGATGAGGCGCGAC 970
Query 16445 CGACGATCCGATCGGCGAAGACCGGACGCAACCTGTGGCCACTGATGAAGGGCCGCAAGT 16504
||| ||||| ||| ||| | ||||||||| || |||||||||||| ||||
Sbjct 969 CGATCATCCGGTCGAACAAGCGC---CGCAACCTGCATCCGTTGATGAAGGGCCAGAAGT 913
Query 16505 ACACCCACCCGGTCCCCGAAGGTGAGGTGACGCGCGTCGACATCACCGTCACCGGCGGCA 16564
||||| ||| | || | | ||||| | || | | || || || |||||
Sbjct 912 TCACCCGCCCCCTGCCTGCTAACGCCGTGACCCCGATCCAGGTGACGGTGACTGGCGGGT 853
Query 16565 ACACCAACACCGAGCTGTGGGTCATCTGCCGCCAGCAGTA---CGAGGGGCTGCTGTGAG 16621
| ||||| ||| | || | | | | || ||| |||| ||||||||||
Sbjct 852 CGGCGGTGTCCGAGGTGTACGCCA-CGGTCCC--GCGGTATCTCGAGTCGCTGCTGTGAC 796
Query 16622 C-GTCC---GCGGA--GCGTTCGC-GACGCTCACCCACGACGAACAGACCGAACGCGACA 16674
| || | |||| || | ||| ||| || ||| |||||| | ||| |||
Sbjct 795 CAGTTCACTGCGGCAGGCCTACGCCGAC-CTGACCGTCGACGAGCGCGACGAGTTCGAGG 737
Query 16675 CCTACAAGAACCCGAAGGCGGTCGTCGAGCTCCGCACCAAGGAGATGGCGATCTGGTCGA 16734
| | |||||| ||| | | ||||| || ||||||||||||||| | ||||||
Sbjct 736 AGTTCGCCAACCCGCGCGCGTACATGGAGCTGCGGACCAAGGAGATGGCGGTGTGGTCGC 677
Query 16735 TCTCCGGTGACTACCAGGACCTGAAGTTCACCGACAAGAAGTCGGCGGCCGGCGGGCTCA 16794
| || |||||||||||| |||||| | ||||||| || | ||||||| |||
Sbjct 676 CGTGTGGCGACTACCAGGACATGAAGTGGAACGACAAGCGTTCCCAGCCCGGCGGTTTCA 617
Query 16795 CGATGTTGCTGCCGTGCGATGAGCACTACGGCGACTACCTCGACGGCCAGCCGAAGGCGA 16854
| | |||| ||| ||| |||||| || ||| |||||||||| || | | |
Sbjct 616 CTGTTCTGCTCCCGGACGACTCGCACTATCAGGAGTACTTCGACGGCCAACCCGACGAGG 557
Query 16855 CGGTCCGGCCGATCGTCGTCCGGCTCCCGGGC---TACACGACGTTGTGGTTCATCACGA 16911
| ||||| |||||||| ||||| | || ||| |||||||||||||||||||||||||
Sbjct 556 CCGTCCGTCCGATCGTGATCCGGATGCCCGGCGAGTACACGACGTTGTGGTTCATCACGA 497
Query 16912 AGTTCACCCGCACCCGCAAGGGGTTGAAGCGCTACTACGAGGTCGAGGCGATCGGCGCGC 16971
||||||| | ||||||||||| | | | | |||||||||||||||| |||||||||
Sbjct 496 AGTTCACTAGGACCCGCAAGGGCCTCAGGAAGTTCTACGAGGTCGAGGCGGTCGGCGCGC 437
Query 16972 TCGAGCATCTGGCGTGGATCCGGCTGTGGCCCTGCCCGTGGTCGGTGGCCGAGTTCCAAC 17031
||||||| ||| | | |||||||||||||| ||| ||||||| | |||||||||||||
Sbjct 436 TCGAGCAGCTGTCCTATATCCGGCTGTGGCCGTGCTGGTGGTCGATCGCCGAGTTCCAAC 377
Query 17032 CGATCAAGTACTGGTTCGGGCTCGGCCCGTCAGCCAGCATGTGCGCGCTCGCGTTGACCG 17091
| || ||| | |||| |||||| ||| || || ||||| | |||||||||
Sbjct 376 CCATTGAGTTCGACTTCGCGCTCGGACCGGTCGCGTCGATCTGCGCCAACTCGTTGACCG 317
Query 17092 CGAACCTCGTTCGGCTGCAGGGCGAGCTGTTCTCCATCCCGACGGGCAACCTGTTCTCAC 17151
||||| | || ||||||| ||||||||| |||||||| || |||||| || |
Sbjct 316 GCAACCTGATCCGTCTGCAGGCGCCGCTGTTCTCGATCCCGACCGGGAACCTGCTCAAGC 257
Query 17152 C-GAGCGCGTGGAACGTCGTCAAGAAGGCGCTGCACCCCATCATCGTCAACCCGCGCAAC 17210
| ||| ||| ||| |||| || ||||| |||| ||||| || ||||||||||||
Sbjct 256 CTGAGA-CGTACAACTTCGTGCGCAACGCGCTCGACCCGATCATGGTGAACCCGCGCAAC 198
Query 17211 AAGTTCATCGGCGACACATCGAAGTGGGATTCGGCGTCGTGGCGGATGGACGAGGCGCTC 17270
|||||| |||||||||| |||| ||||| ||||| | ||| ||||||| ||||||||
Sbjct 197 AAGTTCGTCGGCGACACCACGAAATGGGACTCGGCCGCCTGGAAGATGGACAAGGCGCTC 138
Query 17271 ACCGCCTTCACCGAGGTGTGCCAGGCGAACGACCTGCAGATCGTCTACCAGTTCTTCGAC 17330
||| |||| |||| | || | | | |||||| |||||||| ||||||||||||||||
Sbjct 137 GACGCGTTCAACGAGATCTGTCTGCCCAACGACGTGCAGATCACCTACCAGTTCTTCGAC 78
Query 17331 CCCGACGTCGACCCGCAGCCGTTCCCCGAGTTCATCCACCTCGACCGTCCGAAGCTGATC 17390
||||||||||||||||| ||||||||||||||| | ||||||||| ||| | |||||
Sbjct 77 CCCGACGTCGACCCGCAACCGTTCCCCGAGTTCCTGCACCTCGACTCGCCGCGGATGATC 18
Query 17391 ATCGACTTCGTCGAG 17405
||||||||||||||
Sbjct 17 GTCGACTTCGTCGAG 3
>seq138558
Length=816
Score = 389 bits (430), Expect = 1e-103
Identities = 547/759 (72%), Gaps = 38/759 (5%)
Strand=Plus/Plus
Query 22586 GGGCCGCCCGGTGCGATCCACCGCGGCGAGCTGTCGACGTCCGAGCTGGACGCGATGGCC 22645
|| ||||||||||||||||||| ||||||| | || | |||| ||| |||||
Sbjct 10 GGCCCGCCCGGTGCGATCCACCAGGGCGAGCGCACCACCGCGCAGCTCACGGCGCTGGCC 69
Query 22646 CTCGTGCTCGGTGAGGACAACACCAACTGGGCGTGGCGCAACACCGACACGAACGACCAG 22705
| | | || || | || |||||||||| |||||||||||||| |||||||||
Sbjct 70 GCGGCGTTGGGCAAGACGCAGACGAACTGGGCGTTCCGCAACACCGACACCAACGACCAG 129
Query 22706 TACGTGTGGTCCGGGGCGACGTTCGTCGTCTACCACGGCGTGTACGGCACTCCGGGCCCG 22765
||||||||| ||| | ||||||| |||| ||||||||||||||||| ||||| |||
Sbjct 130 TACGTGTGGAGCGGTGACGCGTTCGTGATCTATCACGGCGTGTACGGCACCCCGGGTCCG 189
Query 22766 GTGGGGCCGCCGCCCGCGCTGACGCCCGGGACCCTGACGATCGACGGCGACCCGGTGGCG 22825
|| || ||| |||| | ||||||| || ||||| || ||||||| | |||| ||
Sbjct 190 GTCGGTCCGGCGCCGAAGATGACGCCGGGCACCCTCACTGTCGACGGTGCGACGGTCGC- 248
Query 22826 TCGCCCGACTTCGGTGTGCGGGTGTCGGGGTCGGC--CGGGTCGTACGCGGTCGGTGTGG 22883
| |||| |||||||||||||| || || || | ||| |||| ||||||| ||||
Sbjct 249 TGACCCG--TTCGGTGTGCGGGTCTCCGG--CGACAACGGCCAGTACTCGGTCGGGGTGG 304
Query 22884 ATCTGCCGCCGATGCCG-AAGGGCGACAGGGGAGATATTGGCCCGTCGGGGTCGGTCATC 22942
| || |||||| | ||| |||||||||| ||| || || || |||||| || || ||
Sbjct 305 ACCTCCCGCCG-TCCCGTAAGGGCGACAAGGGTGACCAGGGTCCATCGGGGCCGTTCTTC 363
Query 22943 AACTCCGTCGACGTCGCCGACGATTCCGATCCCACCGACGGCGACGTCCTCACCTACCGG 23002
| ||| |||||||||| | | | || | ||||||||| || ||| ||||
Sbjct 364 ACCTCGGTCGACGTCGACCAGAACGTCGCGAAGAACGACGGCGATGTGTTCATCTAC--- 420
Query 23003 GAGG--ACGACGGAAAACTGGTGTGGC---AGCCTGGCCAGTTCGTCACCGAGGAGTACG 23057
|| | ||| ||| || | || ||| ||| ||| || | ||||||||| |
Sbjct 421 GACGCCACGTCGGGGAA--GATGCGGCCTGCGCCGGGCGGGTACTGGCTCGAGGAGTATG 478
Query 23058 TCGTCGGCCCGGGCGGATTCCCCACCGTCACCAAGGGATCGTCCGACACCCGCCACACCA 23117
|||| | || | ||| ||||| | ||| ||||||| | |||||||||| |||||||
Sbjct 479 TCGTTGCGCCCGACGGGTTCCCGAACGTGTCCAAGGGCCAGACCGACACCCGACACACCA 538
Query 23118 TGTTCTCGGTCAATATCCCGGCGAAGCCGTGGCCGTACCGGTTCGACTTCGCCGGCGGCG 23177
||||| | ||| | |||||||||||| ||| |||||||||||||||||| ||||||| |
Sbjct 539 TGTTCACCGTCCAGATCCCGGCGAAGACGTTCCCGTACCGGTTCGACTTCACCGGCGGTG 598
Query 23178 TGGACGTGTCGTCGTCCAACGGCACCCAGATCGACATGGAACTCCGCACCGACAAC---G 23234
| ||||| |||||| | || || ||||||||||| |||||||| ||| | |
Sbjct 599 TCGACGTCTCGTCGAGCGCGGGAACGATCATCGACATGGAGATCCGCACCAACATCGGTG 658
Query 23235 CC---------------ACCTCGGGACCACTCGTCGGCTACGGCAAAGGCCAGGACGGTG 23279
|| | | || ||||| || || |||||||| |||||||||||||
Sbjct 659 CCGGGTCCGAGCCGGAGAAGACCGGCCCACTGGTGGGGTACGGCAAGGGCCAGGACGGTG 718
Query 23280 AGGGCTACCGCGAGGTCGCGTTCCGCGCCCACTCCGACG 23318
|||| | ||| ||||||||||||||||| |||| |||||
Sbjct 719 AGGGGTTCCGAGAGGTCGCGTTCCGCGCGCACT-CGACG 756
>seq13656
Length=607
Score = 251 bits (278), Expect = 2e-62
Identities = 274/362 (76%), Gaps = 4/362 (1%)
Strand=Plus/Plus
Query 13325 TTCTTCGACACCATCGTCACCGGGATCGGCAACGCCTGGGACAAGATCAAGAGCTTCGTC 13384
||||||| |||| ||||| ||| ||| ||| || ||||||||| ||||| | ||||||
Sbjct 163 TTCTTCGGCACCGTCGTCGACGGCATCCGCACTGCGTGGGACAAGCTCAAGGGATTCGTC 222
Query 13385 GCGAAGCCGATCAACTTCGTCCTCGGCACCGTCTGGAACAAGGGCCTGCTGCCCGCGTGG 13444
|| ||| ||||| |||||| || ||| || |||||||| || ||||| ||||||
Sbjct 223 GCCGCGCCAATCAATTTCGTCATCAACACGGTGTGGAACAACGGACTGCTCAAAGCGTGG 282
Query 13445 AACACGATCGCCGGGTTCCTCCCCGGGCTCAACCCGATGAAGCC--TGTCGCCGAGGTCG 13502
||| | ||||||| ||||| ||||| ||||| | ||||| || || ||||| ||||
Sbjct 283 AACGCAGTCGCCGGTTTCCTTCCCGGACTCAAGCAGATGACCCCACTGGCGCCG--GTCG 340
Query 13503 CGTTCAAGGACGGCGGCCCCGTCCCGATGGGGTCAGGTGCCAAGCGGGGCAAGGACTCCG 13562
||||| |||||||| || || |||||||| ||||||| |||| ||||| |||||||
Sbjct 341 CGTTCGCCGACGGCGGTCCGGTACCGATGGGTGCAGGTGCGCAGCGAGGCAAAGACTCCG 400
Query 13563 TCCACGCGCTGATGATGCCCGACGAACACGTGTGGGATGTCCGGGACGTCCGACGTGCCG 13622
| ||||| ||||||||||||||||| ||||||||||||||| ||| ||| | || |
Sbjct 401 TGCACGCACTGATGATGCCCGACGAGCACGTGTGGGATGTCGAGGATGTCAAGGGCGCGG 460
Query 13623 GCGGTCACGGCGCGATGTACCGGATGCGCAACATGGTCGACTCCGGGCGCCCGTTCACCT 13682
|||| ||| || |||||| |||||| | | ||| | ||| ||| ||||| |
Sbjct 461 GCGGGCACAACGTCATGTACGCCATGCGCGGCCTCATCGCCCGCGGAATCCCCTTCACGT 520
Query 13683 GG 13684
||
Sbjct 521 GG 522
>seq139445
Length=1680
Score = 208 bits (230), Expect = 3e-49
Identities = 272/375 (73%), Gaps = 6/375 (2%)
Strand=Plus/Plus
Query 3604 GTGCGGATCAACTCTCCCGGCGGCGACGTCTACGACGCGATCGCCATCACCAACGCGCTG 3663
|| ||||||||||| || |||||| ||| | |||| ||||| ||| ||||||||||
Sbjct 377 GTCCGGATCAACTCGCCGGGCGGCAGCGTGTGGGACGGCATCGCGATCCTCAACGCGCTG 436
Query 3664 CGCAACCACGACGCGAC---GATCACCGTCCAGGTCGACGGTCTCGCCGCGTCGGCGGCC 3720
||| |||| || || || |||| || ||||||||| |||| ||||||||||
Sbjct 437 CGCGCCCACCGGGCCACCGTGACCACCATC---GTCGACGGTGTCGCGCTGTCGGCGGCC 493
Query 3721 AGCTTCATCGCGATGGCCGGCGACGAGGTGGTGATGTGCCGCAACACCGAGATGATGATC 3780
||||||||||| |||| ||| |||||||| |||||| |||||| | ||||||||||
Sbjct 494 AGCTTCATCGCCATGGGCGGTGACGAGGTCGTGATGATGCGCAACGCGCAGATGATGATT 553
Query 3781 CATGACGCCCGTGGCTTCTGCATCGGCAACGCCACCGACATGGCCGAGTACGCCGAGTGG 3840
|| ||||| || | || ||||||| ||| || ||| || |||| ||| |
Sbjct 554 CACGACGCGTCGGGACTGTGTGTCGGCAATTCCAGTGAGATGCAGGACTACGTCGATCTG 613
Query 3841 CTCGGCCGCGCGAGCGACAACATCGCCTCGATGTACGCCGAGAAGACCGGCGGTGAGGTG 3900
||| | | |||||||||||||| ||||| |||||||| ||| |||| || | |
Sbjct 614 CTCCACAAGACCAGCGACAACATCGCGTCGATCTACGCCGACAAGGCCGGTGGCACGCCG 673
Query 3901 AAGGACTGGCGCAAGGCGATGACGGCCGAGACCTGGTACACGGCGGAGGAAGCCGTCGAG 3960
|| | |||||| | |||||||||||| ||||||||| | | | || || || ||
Sbjct 674 AAACAGTGGCGCGCGCTGATGACGGCCGAAACCTGGTACTCCGACGCCGAGGCGGTGCAG 733
Query 3961 GCGGGTCTCGCCGAC 3975
|| || || ||||||
Sbjct 734 GCCGGACTGGCCGAC 748
>seq46609
Length=4533
Score = 203 bits (224), Expect = 1e-47
Identities = 365/525 (70%), Gaps = 20/525 (4%)
Strand=Plus/Minus
Query 3460 TGGTACCGGGTGCGCAACGAGGCGGGCAGCGACGACG-CCGAGATCATGATCTACGACTT 3518
|||| ||| | || |||||||| |||| ||| || | ||||| || |||||| |
Sbjct 596 TGGTTCCGCATCCGGAACGAGGCCGGCA-CGAAGAAGGCCGAGGTCTACGTCTACGGCAC 538
Query 3519 CATCGATCCCGACCCGTGGTTCGGTGGCATCTCCGCGCAAGACTTCGTGCGCGACCTCGA 3578
||||| || | |||| || ||| | | || || ||| ||||| | ||
Sbjct 537 CATCGGCGGCGGCTGGTGGGGCGACGGCGTGACGGCCGGCGAGTTCAACCGCGAGGTGGA 478
Query 3579 CGCGATCGACGCCTCGA--ACATCCTGGTGCGGATCAACTCTCCCGGCGGCGACGTCTAC 3636
|||| |||||| |||| | ||| | || ||||||| |||||||| |||| |
Sbjct 477 CGCGCTCGACG--TCGACGAGATCACGCTGTACGTCAACTCCGGCGGCGGCGGGGTCTCC 420
Query 3637 GACGCGATCGCCATC----ACCAACGCGCTGCGCAACCACGACGCGACGATCACCGTCCA 3692
|| || ||||| || |||| | | ||||| ||| | |||| | | |||| |
Sbjct 419 GAGGCCATCGCGATGCGGAACCACCTCA-TGCGC---CACAAGGCGAAGGTGACCGCGTA 364
Query 3693 GGTCGACGGTCTCGCCGCGTCGGCGGCCAGCTTCATCGCGATGGCCGGCGACGAGGTGGT 3752
|||||||| |||||||||||||| ||| ||| ||| || || | ||||||||| ||
Sbjct 363 CGTCGACGGGCTCGCCGCGTCGGCCGCCTCGTTCCTCGTGACGGGTGCCGACGAGGTCGT 304
Query 3753 GATGTGCCGCAACACCGAGATGATGATCCATGACGCCCGTGGCTTCTGCATCGGCAACGC 3812
||| || ||| |||||||||||||||| ||||| | | || ||| || |||||
Sbjct 303 CATGGGCGAGAACGCCGAGATGATGATCCACGACGCGCTCTCCATCGTCATGGGGAACGC 244
Query 3813 CACCGACATGGCCGAGTACGCCGAGTGGCTCGGCCGCGCGAGCGACAACATCGCCTCGAT 3872
|||| | || | |||||| ||||| | ||| ||||||||||| |||||
Sbjct 243 TGGCGACCTCCGCGCGGCCGCCGACGAGCTCGACGGCGTCTCGGACAACATCGCGTCGAT 184
Query 3873 GTACGCCGAGAAGACCGGCGGTGAGGTGAAGGACTGGCGCAAGGC---GATGACGGCCGA 3929
|||||| ||||| | ||||| ||| | |||||||| ||| ||||| |||||
Sbjct 183 GTACGCGAAGAAGGCGGGCGGGGAGATCGCCGACTGGCG---GGCCCTGATGATCGCCGA 127
Query 3930 GACCTGGTACACGGCGGAGGAAGCCGTCGAGGCGGGTCTCGCCGA 3974
||||||||||||||| ||||| ||||| ||||| || ||||||||
Sbjct 126 GACCTGGTACACGGCCGAGGAGGCCGTGGAGGCCGGCCTCGCCGA 82
>seq204283
Length=732
Score = 165 bits (182), Expect = 3e-36
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 17486 CGGCTGGGTGCTGTACCCGATCCTCGGCGACGACGGTTACCAGAAGTACCTCGACCAGGT 17545
|||| ||||||||||||| | | ||| |||||||| |||| |||||| |||||| ||
Sbjct 1 CGGCGCGGTGCTGTACCCGGTGCCCGGTGACGACGGCTACCGGAAGTATCTCGACACCGT 60
Query 17546 GGAGGGGACGATCGCGAACAAGCCGATCGCGGTCTACACCACCGGGAAGTACACGCCCGC 17605
|||||| |||||||||||||||||||||||||||||||||||| | ||| | || |
Sbjct 61 CCAGGGGATGATCGCGAACAAGCCGATCGCGGTCTACACCACCGGCGACTACTCCCCGGT 120
Query 17606 TGACGAGTACGAGCAGACCACCCACACGGCGATGGCGTCGCGGGTGACGGCCGGCGGCAA 17665
| |||| | |||||||||||| | |||| || ||| | || || ||||||||
Sbjct 121 TCCGGAGTTCTCCCAGACCACCCACGTCGGTCTGGCTTCCCGGATTACCGCTGGCGGCAA 180
Query 17666 GTCACCCGAGTGGGTCAACACGCTGCTGGTGACGGG 17701
|||||||| ||| | |||||| ||||| ||||
Sbjct 181 ATCACCCGAATGGCTGAACACGGCCCTGGTTTCGGG 216
Score = 125 bits (138), Expect = 2e-24
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 18075 CAGATGGCCGACGGGAAGGTCGAGGTCGACTACCTCGAGGAGATCACCTACGAGGACTCA 18134
|||||| ||||||| | ||| || |||||| |||||| ||||||| ||||||||||||
Sbjct 491 CAGATGCCCGACGGCACGGTGAAGATCGACTTCCTCGAAGAGATCATCTACGAGGACTCC 550
Query 18135 CGCAGCGTGCGCGGCAAATTGACGCTGCAGATCGGCCGGCCCGACGCCGAACGCGAACCC 18194
||| | ||| || |||| |||||||||||||| |||||| ||| ||||||
Sbjct 551 CGCTCGGCGCGGGGACGCGTGACCCTGCAGATCGGCCGCGCCGACGACGAGAAGGAACCC 610
Query 18195 GGGTCCATCGCCCTCGGCAAGATCCGCCGATTCGGCACCTGGCTCACACGAGCAGCACT 18253
|| |||| || || |||| | ||||| |||||| |||| |||| || |||| |||
Sbjct 611 GGCGCCATGGCGCTGAGCAAACTGCGCCGCGTCGGCAACTGGGTCACCCGCGCAGTACT 669
>seq219746
Length=1062
Score = 140 bits (154), Expect = 1e-28
Identities = 202/282 (72%), Gaps = 6/282 (2%)
Strand=Plus/Plus
Query 46608 GTGCACGAATCACTCGGTGGCGAAGGGCCGCAAACGAGTTGGCTCACAGCCCGATCTCTT 46667
|||||| |||||||||| || ||||| ||| || | | | | ||||| | |
Sbjct 24 GTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCCGACCCCAA 83
Query 46668 CGGCGAGATCCTTCCGGACGCGGCGTCGGAGCGGTCCCGCGCGACCATGTGGGACGTCCC 46727
||| ||| | | || |||| || | || || || || ||||| ||||||||||||
Sbjct 84 CGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGGGACGTCGT 143
Query 46728 GCGGTTCGCCGAGGTCCACCAGTACCGCGCCGTGATCGTCGAGAACGTCGTCGACGCGTT 46787
|||||||||||| |||||||||||| | | ||||||| ||||| ||||||| ||
Sbjct 144 CCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTCGACGTGTA 203
Query 46788 CCACTGGGTTCCGT--TCCGCGCC-TGGCTGATGGCGATGGACTGCCTCGGCTACGACCA 46844
|||| |||| | |||||| ||||| |||| |||| ||| |||||| ||||
Sbjct 204 TTTCTGG---CCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTACAACCA 260
Query 46845 CCACATCGTCATGCTCAACTCGATGCACGCCCAGACATTCGG 46886
| | ||||| |||||||||||||||||| ||| |||||
Sbjct 261 CGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGG 302
Score = 114 bits (126), Expect = 4e-21
Identities = 150/203 (74%), Gaps = 15/203 (7%)
Strand=Plus/Plus
Query 47043 GTGGGGCAGATACCGAGCCCAGTACGTCTACCGCTGCCCGAACG--TGCGGTGCCGCAAC 47100
||||||| | ||||| ||||||||| | | ||||||||||| | | || || ||
Sbjct 438 GTGGGGCCGCTACCGCGCCCAGTACACGTTCTCCTGCCCGAACGGCTCATGCGCGGCCAC 497
Query 47101 AGCATCGTCGAACCGCTGTACCGCCCGGCCGCCGACATCATCGACTGGACACTTGAGGGG 47160
|| | ||||| | || || ||||| ||||||||||||||| | | || ||
Sbjct 498 AG-----TGGAACCCGACTGGCGACCCGCCGCAGACATCATCGACTGGTCGC-TGCCCGG 551
Query 47161 CA-GCGCATCGGCGACCGCGCGAAA---CCGCTCGCCGCGAAGACGATGGCGCGCATCCA 47216
|| |||||||| |||||| ||| ||||| |||| |||||| ||| | || |||||
Sbjct 552 CACCCGCATCGGTGACCGC---AAACGCCCGCTGGCCGAGAAGACCATGACCCGTATCCA 608
Query 47217 GGCCGGGATCGACCGCTACTGGG 47239
|||||||||||||||||||||||
Sbjct 609 GGCCGGGATCGACCGCTACTGGG 631
>seq191774
Length=483
Score = 138 bits (152), Expect = 4e-28
Identities = 279/426 (65%), Gaps = 18/426 (4%)
Strand=Plus/Minus
Query 22149 CGCGCCGATCCCCGAACCACTCTCGGAGCTCGTCGCGCAGGCCGTCTGCAACTACACCCA 22208
||||||||||| ||||| |||||| |||||||||| ||||||||| |||| |||||
Sbjct 475 CGCGCCGATCCAAGAACCGCTCTCGCAGCTCGTCGCCCAGGCCGTCGTGAACTTCACCCT 416
Query 22209 GGACCTCGTGTGGTCGGGCGAGGTCCGC---GACTTCGTGCCGCTCGGCCACTGGGAGGC 22265
|| ||| |||||| | | | | |||| |||| | ||||||| | ||||||
Sbjct 415 GGGCCTGGTGTGG---GACAACGACCGCAACGACTGGACGGCGCTCGGTGAGTGGGAGAA 359
Query 22266 GACCCCAGACCTCGGCGAC------GTCGGGGTCGAAACCGTCGCGGGTGAGGTGACCCG 22319
| ||| || |||||||| |||| |||| |||| ||| || | |||||
Sbjct 358 GGACCCGGAGTTCGGCGACCTCCTCGTCGAGGTCCTCACCGACGCCGGCA---TCACCCG 302
Query 22320 CATGACCCACCGCGTCACCGGCATCTCCGTCCTCGGCGAGAACCCCGACCAGGCGTGGAA 22379
||||||||||||| ||| || ||||| || |||| || | ||
Sbjct 301 CATGACCCACCGCACCACAGGGATCTCGGTGATCGGTGA-ATCCNNNNNNNNNNNNNNNN 243
Query 22380 GCTGCTGCGAGAGAAAGTGAGACAGCACAAT--GGCTGACGACCCGATCGAACGCATCGG 22437
||||||||| |||||||| || ||||
Sbjct 242 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTGACGATCCGATCGAGCGGCTCGG 183
Query 22438 TGTGGAGCTGGAGATCTTCGCGATCCCGCAGCCCGCCGGCGCCCCGCCGATGACGGAAAC 22497
||| || || |||||| ||| ||| || || ||||| | |||||| |||| || ||
Sbjct 182 TGTCGAACTCGAGATCATCGGTATCGCGGTTCCGGCCGGATCGCCGCCGCTGACCGACAC 123
Query 22498 GTACATGCACGTCCGCCGACGGCAGAACGGTGCCGCCGAACGGGCCGTGCTGGGTCTGCC 22557
||| | ||||||||||| || ||| ||||||| |||||||| |||||| |||| |||||
Sbjct 122 CTACCTCCACGTCCGCCGCCGCCAGGACGGTGCGGCCGAACGCGCCGTGATGGGCCTGCC 63
Query 22558 AGCGTA 22563
|| ||
Sbjct 62 CGCTTA 57
>seq184310
Length=1059
Score = 100 bits (110), Expect = 1e-16
Identities = 203/291 (70%), Gaps = 18/291 (6%)
Strand=Plus/Plus
Query 2429 AAGCTCGCGCCGCGGCCGCAGCGCACGATCTCGAACTGGAACGTCGCGCTCGACGGTGGG 2488
|||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||
Sbjct 373 AAGCTCGCGCCGCGCCCGCAGAGCACGATCTCGAAGATCAACGTCGCGCTCGATGGTGGA 432
Query 2489 CTGATGTCGATCGAGCAGTACGCGCCGGCGTCGAATGGCCGAGTGCTGTACGGGATCAAC 2548
|| ||||||| |||| | ||||||||| ||| | | ||| | | | |
Sbjct 433 CTCGAATCGATCGTGCAGCGTCCCCCGGCGTCG-ATGTC-----GGTGTTCAAGGACGAG 486
Query 2549 CCGCT-GAAGATCCCGATCGGCCGGCTGGTG-GTGTACTCGCGTGACCAGGACCCGGGCG 2606
||| | | || ||||||| || ||| | ||| || ||| ||| | |||||
Sbjct 487 CCGATCGGAG---TCGATCGGTTGG-TGGCGTATGTGTTC-CGT---CAGAAACCGGGAT 538
Query 2607 TGTGG-TGGGGCAACTCGCTGCTACGCCCGTCGTACAAGCATTGGCTGATCAAGGACGAA 2665
|||| | |||| ||| |||| || ||| | |||||||| |||||||| ||||||||
Sbjct 539 CGTGGATCGGGC-GGTCGATGCTGCGTCCGGCCTACAAGCACTGGCTGATGAAGGACGAC 597
Query 2666 CTGATCCGGTATCAGGCGATGTCGATCAAGCGCATCGGGATGGGCGTCCCG 2716
||| |||| || |||| | ||| |||| ||| ||||| | |||
Sbjct 598 CTGCTCCGCACCCACGCGACGATGATGCGTCGCAACGGCCTGGGCATGCCG 648
>seq259555
Length=483
Score = 98.7 bits (108), Expect = 3e-16
Identities = 174/250 (70%), Gaps = 18/250 (7%)
Strand=Plus/Plus
Query 5044 TGGCAACAAACACCCCCGTCGTGTCGATCGACGACGGCAACAACATCACCGTCGATCAGG 5103
||||||||| || ||||||||| | ||||||| || | |||||||| |||
Sbjct 173 TGGCAACAAGCA------TCGTGTCGACCTCCGACGGCGGTAAGACCACCGTCGCGCAGC 226
Query 5104 TCATGGGCAACCCGCGGGCGATCCCGCAGCGGGTCATCGACCTGGTCCGCGACAACA--- 5160
| || |||||||| | | ||||| ||| || ||||| | || ||||||
Sbjct 227 TGATCGGCAACCCCCTGCTCGTCCCGGCGCGCATCCTCGACAGGCTC---GACAACGCAT 283
Query 5161 TCATGGGCGAGGCGTTCTTCCGCAACGCCGGC---AACCCGGGATCGCTGCTGGTGCAGT 5217
|| || || |||| || | || ||||| ||| |||| | | || | |||||| ||
Sbjct 284 TCTTGACCGCGGCGGTCCTGCGGAACGCAGGCCCCAACC--GCAACGGT-CTGGTGTCGT 340
Query 5218 TCCAGCGGTCGACGCCGCTGTTCCTCGACGGCGACCCCGAGGCCGTCGCGGAGTTCGGCG 5277
|| | | ||| |||||||||||||||| ||||| | | ||||||||| ||||| |
Sbjct 341 TCAACGAGGAGACCCCGCTGTTCCTCGACGCCGACCTGGCCGACGTCGCGGAATTCGGTG 400
Query 5278 AGATCCCCGT 5287
||||||||||
Sbjct 401 AGATCCCCGT 410
>seq235553
Length=811
Score = 98.7 bits (108), Expect = 3e-16
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 32450 TCTGCGCCCTCGCGGTTCTTCTCGATCAGGCACTCCGCGGTCTCGCACGGGGTGTCGCCG 32509
|| ||||| | ||||||| ||||| |||||||| | ||| ||||| |||||| |||
Sbjct 389 TCGGCGCCTTGCCGGTTCTGCTCGACGAGGCACTCGGTGGTGTCGCAGCCGGTGTCACCG 330
Query 32510 ATCGGGGCGTCGGTGTCGATGAGGCCGTCGCCGTCCTTGTCCCACCCGGGCGGAATG 32566
|| || ||||||| |||||| | ||||||| |||||||||||| |||| || |||
Sbjct 329 ATGGGCGCGTCGGCGTCGATCTGCCCGTCGCAGTCCTTGTCCCAGCCGGCGGGGATG 273
>seq136770
Length=900
Score = 82.4 bits (90), Expect = 3e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 877 GTTTCGACGAGGTCGATCTCGTCATCTACGACGAGGCGTACAACCTGACGGGCGTCCAGA 936
||||||||| | |||| || | |||||||||||||| |||||| | || |||| | |
Sbjct 1 GTTTCGACGTGATCGACCTGCTGATCTACGACGAGGCCTACAACGTCACCGGCGGCATGG 60
Query 937 CCGACGCGCTGGACCCGACGCAGCTGGCGTCGAAGAACGCGCAAACGATCTAC 989
|| ||||||||| | ||||| |||| |||| ||| |||| || ||||||
Sbjct 61 AAGATGCGCTGGACTGGGCGCAGATGGCCGCGAACAACCCGCAGACCATCTAC 113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 172642867423134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |