Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031230.1
Length=98136
Score E
Sequences producing significant alignments: (Bits) Value
seq84152 289 2e-73
seq134864 161 6e-35
seq136878 134 9e-27
seq6603 120 2e-22
seq248049 104 1e-17
seq66867 102 5e-17
seq231474 96.9 2e-15
seq153771 93.3 3e-14
seq12676 91.5 9e-14
>seq84152
Length=5826
Score = 289 bits (320), Expect = 2e-73
Identities = 521/757 (69%), Gaps = 56/757 (7%)
Strand=Plus/Plus
Query 46618 GGTGTGGACCTCTCACATTCGCCGAAGTGGCGGGAACAGCTCGGGTCGCTCGGCGGCGGC 46677
||||| |||||| || ||| ||||||||| || ||||||||||||||||||||||||
Sbjct 4695 GGTGTCGACCTCGGGCACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCGGCGGC 4754
Query 46678 AACCACTTCATCGAGCTGTGCCAGTCGGTGATTGCGGAATACGACGACGGTGAGCTGTGG 46737
|||||||||||||||||||||| ||| || | || || ||| |||||
Sbjct 4755 AACCACTTCATCGAGCTGTGCC--TCGACGAGTCCG--AT-------CGGG----TGTGG 4799
Query 46738 CTGTTCCTCCATTCGGGTTCGCGTGGTGTCGGCAACAAGATCGCCCAGAAGCANNNNNNN 46797
||||||| || || |||||||| |||||||||||| |||||| ||| ||
Sbjct 4800 ATGTTCCTGCACTCCGGTTCGCGGGGTGTCGGCAACCGGATCGCGCAGCGACACATCGCG 4859
Query 46798 NNNNNNNNNNNNNNGTGCAAGCGATGGCATGTCCCGCTGGCGAATCCTGACCTGGCCTAC 46857
| || | ||||| || ||| |||| || ||||| || |||
Sbjct 4860 ATCGCGCAGAAGCTGGCCAGGAAGTGGCACATCGTGCTCCCGAACCCGGACCTCGCGTAC 4919
Query 46858 CTACCCTCCGGCACGCAGGAATTCACCACCTACCTACGAGAGCTGCGGTGGGCCCAGCGA 46917
|| || |||| |||| ||| || ||||| || || ||| |||||| |||||
Sbjct 4920 CTGCCGTCCGAGACGCCGGAGCTCGAGGTGTACCTCCGGGATCTGGCGTGGGCACAGCGG 4979
Query 46918 TTCGCACTCGAGAACCGCGCCGAGATGATGGATCGGTTCGTCGCGGTTTTCCAGTGGTGG 46977
||||| |||||||||||||| |||||||||||||| ||| ||| ||| ||
Sbjct 4980 TTCGCGCTCGAGAACCGCGCTGAGATGATGGATCGCTTC----CGG-----CAGGCGT-- 5028
Query 46978 CTCGAGGATCAGGGGTACGACTTCCATAACGACGAGATGCCTGATGAGGTCGAGGTCCGG 47037
||| | | ||||| | | |||||| || | ||| ||||| | |
Sbjct 5029 -TCGCGCACT--GGGTAGGTC-------ACGACGGTGACCCGGCCGAGCTCGAGACCGAG 5078
Query 47038 CGCATCAACTGCCACCACAACTACACCG----AGAACGTCACGATCAACGGCGAGAGGGT 47093
|| |||||| ||||||||||||||||| ||| || |||| |||| || ||
Sbjct 5079 CGGATCAACACCCACCACAACTACACCGTCCGAGAGCGACACGG----CGGCAAGGACGT 5134
Query 47094 GTGGCTGACGCGCAAGGGTGCGATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGG 47153
||||||||| |||||||||||||||||||| |||||| | || ||||||| ||
Sbjct 5135 GTGGCTGACCCGCAAGGGTGCGATCGACGCGCACGAGGGTGTGCGGGGCATCATCCCGGG 5194
Query 47154 CTCCATGGGCACCAAGTCGTACGTCGTTGTGGGGCAGGGGAATT--CGTCTGGCCTATAC 47211
||| ||||| || ||| ||| |||| | |||| |||| || | || || |
Sbjct 5195 CTCGATGGGGACGCGGTCCTACATCGT-GACCGGCAAGGGACACGGCGGC-GGTCTGTGT 5252
Query 47212 TCGGCACCACATGGGGCTGGCCGGAACTTCTCTCGCACCGAGGCTCGCAAGCG---GTTC 47268
||||| || || || || || || ||||| || ||||||| |||||| || |
Sbjct 5253 TCGGCGCCGCACGGCGCGGGGCGTCGGTTCTCACGGGCCGAGGC---CAAGCGTCGGTAC 5309
Query 47269 ACTGCGGACGACCTCGCGAAGGCCATGGAGGGCATCGAGTACCGCCACGGTGAGGAGTGG 47328
|| | || ||| |||| | || ||| || ||||||||||| ||||| | |||||||
Sbjct 5310 ACCGAGGCCGATCTCGAGGCCGCGATGACCGGGATCGAGTACCGGCACGGGGCGGAGTGG 5369
Query 47329 ATCGACGAGATCCCCGCA-GCGTACAAGGACATCGAC 47364
||||||||||| |||||| ||||||||| |||||||
Sbjct 5370 ATCGACGAGAT-CCCGCAGGCGTACAAGAGCATCGAC 5405
Score = 134 bits (148), Expect = 9e-27
Identities = 140/184 (76%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 46265 TCGACGAGACCACGCGCAAGCAGGCCGAGGAGATCGCCAGTCTGCCATTCATCTACCCCC 46324
||||||||| ||| | | |||||| |||||| ||| ||||| ||| | |||| |
Sbjct 4401 TCGACGAGAAGACGATCGACCAGGCCAAGGAGACCGCAGCGCTGCCCTTCGTGCACCCGC 4460
Query 46325 ACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTGCCGTGGGCACGGTGATCC 46384
|||| ||| ||||||| ||||| ||| |||||||| || || || || || || ||||
Sbjct 4461 ACGTGGCGTTGATGCCGGATGCGCACTACGGCAAGGGATCCGCGGTCGGTACCGTCATCC 4520
Query 46385 CCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACATCGGTTGCGGGATGATCG 46444
| || |||||||||||||| || || || || ||||||||||| ||||| |||||||
Sbjct 4521 CGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGTCGACATCGGGTGCGGCATGATCG 4580
Query 46445 GCGT 46448
|||
Sbjct 4581 CCGT 4584
>seq134864
Length=649
Score = 161 bits (178), Expect = 6e-35
Identities = 234/328 (71%), Gaps = 2/328 (1%)
Strand=Plus/Minus
Query 47046 CTGCCACCACAACTACACCGAGAACGTCACGATCAACGGCGAGAGGGTGTGGCTGACGCG 47105
|||||||||||||||||| | || ||| | |||| ||| | ||||| || | ||
Sbjct 337 CTGCCACCACAACTACACGGCCCGCGAGACGCACCACGGTGAGCTGCTGTGGGTGTCCCG 278
Query 47106 CAAGGGTGCGATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGGCTCCATGGGCAC 47165
||||||||| ||| ||||| | ||| ||| || ||||| || || ||||| ||
Sbjct 277 CAAGGGTGCCATCAACGCCGAGGTCGGCGTCCCCGGGCTGATCCCGGGGTCGATGGGTAC 218
Query 47166 CAAGTCGTACGTCGTTGTGGGGCAGGGGAATTCGTCTGGCC-TATACTCGGCACCACATG 47224
|||||||||||| || |||||||| | | | || | | | ||||| || |
Sbjct 217 GGCGTCGTACGTCGT-GTCCGGCAGGGGGAACGAGCAGTCCCTGTGCAGTGCACCGCACG 159
Query 47225 GGGCTGGCCGGAACTTCTCTCGCACCGAGGCTCGCAAGCGGTTCACTGCGGACGACCTCG 47284
| || |||||| || ||| || || |||| |||||| ||||| | ||||||||
Sbjct 158 GAGCAGGCCGGGCCTACTCGCGGACGAAGGCGCGCAAGACCTTCACGGTCGACGACCTGC 99
Query 47285 CGAAGGCCATGGAGGGCATCGAGTACCGCCACGGTGAGGAGTGGATCGACGAGATCCCCG 47344
| ||| |||| || |||||||||||| || |||| || |||||||||||||||
Sbjct 98 GGGCGGCGATGGTCGGGATCGAGTACCGCGACACGGAGGCGTTCGTCGACGAGATCCCCG 39
Query 47345 CAGCGTACAAGGACATCGACCAGGTCAT 47372
|| |||||||||||||||||||| ||
Sbjct 38 GCGCCTACAAGGACATCGACCAGGTGAT 11
>seq136878
Length=1830
Score = 134 bits (148), Expect = 9e-27
Identities = 218/314 (69%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 74563 TTCACTCCGAGTGGGGTTGCGGTAGCCAATTTCACTGTGGTGTCAAATCCCCGGAGATTC 74622
||||| ||| || | ||||| ||||| ||||| || | ||| | || |||| |||
Sbjct 345 TTCACCCCGTCCGGTGCGGCGGTGGCCAACTTCACCGTTGCGTCCACGCCGCGGATGTTC 286
Query 74623 GACAAGCAAACGAATTCCTGGATTGACGAGGAGCCATGGTTCGTACGTTGCAACATCTGG 74682
||| || || || |||| |||| ||| || |||| | || |||| |||||||
Sbjct 285 GACCGTCAGACCAACGAATGGAAAGACGGCGAGGCACTGTTCATGCGGTGCAGCATCTGG 226
Query 74683 CGTGACGCGGCCGAGAATGCCGCAGAGTCGCTTGACAAGGGCACTCGAGTGATCGTCCAG 74742
|| || ||||||||||| | || ||| || |||||| |||| || ||||| |
Sbjct 225 CGGGAGGCGGCCGAGAACGTGGCGGAGAGCCTCACCAAGGGTGCTCGTGTCATCGTGTCG 166
Query 74743 GGGCGTCTCAAGTCCCGGTCATATACCACCAACGAAGGCGAGGATCGAACGGTCCTTGAG 74802
|| || |||||| || || || ||| ||| || ||| | || ||||| | |||
Sbjct 165 GGTCGGCTCAAGCAGCGCTCCTACGAAACCCGCGAGGGTGAGAAGCGCACGGTGGTCGAG 106
Query 74803 CTCGAGGTCGATGAGATCGGACCCTCGCTGCAGTGGGCCACTGCTAAGGTTCAGCGCACC 74862
||||||||||| ||| |||| ||||||||| ||| || || || ||||| | ||| ||
Sbjct 105 CTCGAGGTCGAGGAGGTCGGTCCCTCGCTGAAGTACGCGACCGCCAAGGTCAACCGCGCC 46
Query 74863 GAACGAGGCGGCGG 74876
|| ||||| ||
Sbjct 45 TCGCGTGGCGGTGG 32
>seq6603
Length=23608
Score = 120 bits (132), Expect = 2e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 27239 GGTGGCGTGCTTCCGGGCTACACCCCCGGCCGGGACGTGCACAAGTTCATCTCCCCGACC 27298
||||| ||||| ||||||||| |||| ||| ||| |||| ||| ||||||| ||
Sbjct 5989 GGTGGTGTGCTGCCGGGCTACTCCCCTGGCTTCGACAACCACACCTTCGTCTCCCCCACT 5930
Query 27299 GGCGGCGAACTCCACCTGTCCGGTGGCGAGGCCATCATGCGGCCGGAGTGGACTCGGGCC 27358
|| |||| || |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct 5929 GGTGGCGTGCTGCACCTGTCCGGTGGCGAGGCGATCATGCGCCCGGAGTGGACCAAGCAG 5870
Query 27359 GTGGGCGGTCCCGCTGCCGTGGACCGAATGAACCGAGAGGC 27399
||||| || ||| || |||| || ||||||| |||||
Sbjct 5869 GTGGGTGGACCCCGAGCTGTGGCGCGGATGAACCAGGAGGC 5829
>seq248049
Length=1043
Score = 104 bits (114), Expect = 1e-17
Identities = 140/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 74662 TTCGTACGTTGCAACATCTGGCGTGACGCGGCCGAGAATGCCGCAGAGTCGCTTGACAAG 74721
||| | || |||||||||||||| | || |||||||| | | | |||||||| |
Sbjct 712 TTCCTGCGCTGCAACATCTGGCGGCAGGCTGCCGAGAACGTCACGGAGTCGCTCACCCGC 771
Query 74722 GGCACTCGAGTGATCGTCCAGGGGCGTCTCAAGTCCCGGTCATATAC--CACCAACGAAG 74779
||| | || || |||||| || || |||||| | | || | | ||||| ||||
Sbjct 772 GGCTCCCGCGTCATCGTCACCGGCCGGCTCAAG--CAGCGCAGCTTCGAGACCAAGGAAG 829
Query 74780 GCGAGGATCGAACGGTCCTTGAGCTCGAGGTCGATGAGATCGGACCCTCGCTGCAGTGGG 74839
||||| | || || ||| | ||||| |||||||| |||||||| |||||||||| || |
Sbjct 830 GCGAGAAGCGCACCGTCATCGAGCTGGAGGTCGACGAGATCGGCCCCTCGCTGCGGTACG 889
Query 74840 CCACTGCTAAGGT 74852
| || || |||||
Sbjct 890 CGACCGCCAAGGT 902
>seq66867
Length=2092
Score = 102 bits (112), Expect = 5e-17
Identities = 175/247 (71%), Gaps = 8/247 (3%)
Strand=Plus/Minus
Query 43548 AAGGGTCTCGAGGAGCTCGACCAGGACCCG--GGCGTCGACGTCATCATCTGCACCCGAG 43605
|||| |||| || |||||| ||||||| || |||| |||||| | | |||| |
Sbjct 1038 AAGGCACTCGCCGATCTCGACGCGGACCCGACGGTGTCG--GTCATCGTGATCGCCCGCG 981
Query 43606 GCGGTGGATCCAAGGAGGACCTGCTGCCGTGGTCTGATGAGG-GCTTGGTGCGTGCGGCG 43664
|||| || ||| ||||| |||||||||| || |||| ||| || || |||| |
Sbjct 980 GCGGCGGCTCCGTCGAGGATCTGCTGCCGTTCAGCGACGAGGCGCTGTGT-CGCGCGGTG 922
Query 43665 TTCGCTTGCAA-CACCCCCATTGTCTCCGCGATCGGTCACGAGAACGACTGTCCACTCCT 43723
| |||| || |||||| | || || |||||||| ||||| ||| ||| || ||
Sbjct 921 T-CGCTGGCGCGCACCCCGGTGGTGTCGGCGATCGGACACGAACCCGATCATCCGCTGCT 863
Query 43724 TGACCGTGTGGCGGACCTGCGTGCCTCGACGCCCACCGACGCTGCGAAGAGGGTTGTGCC 43783
||| ||||| |||||||||||| |||| |||||||| || || || | || || ||
Sbjct 862 GGACATGGTGGCCGACCTGCGTGCCGCGACCCCCACCGATGCGGCCAAACGCGTCGTCCC 803
Query 43784 AGACCTC 43790
||| ||
Sbjct 802 CGACGTC 796
>seq231474
Length=516
Score = 96.9 bits (106), Expect = 2e-15
Identities = 145/198 (73%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 47041 ATCAACTGCCACCACAACTACACCGAGAACGT-CACGATCAACGG-CGAGAGGGTGTGGC 47098
||||||||||||||||||||||||||| || | || | ||| || |||| |||||
Sbjct 289 ATCAACTGCCACCACAACTACACCGAGCGCGAGCGCG-TGTTCGGTCGCGAGG-TGTGGG 346
Query 47099 TGACGCGCAAGGGTGCGATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGGCTCCA 47158
|| | |||||||| |||||| || || |||| | ||| || ||||||||||| |
Sbjct 347 TGTCCCGCAAGGGCGCGATCCGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCGA 406
Query 47159 TGGGCACCAAGTCGTACGTCGTTGTGGGGCAGGGGAATTCGTC-TGGCCTATACTCGGCA 47217
||||||| |||||||||||| ||| | ||| | || | | || || |||||
Sbjct 407 TGGGCACGGCGTCGTACGTCGTCACGGGCCTGGGCTACCCGCCGTCGCTGAT-GTCGGCC 465
Query 47218 CCACATGGGGCTGGCCGG 47235
|| || ||||| ||||||
Sbjct 466 CCGCACGGGGCCGGCCGG 483
>seq153771
Length=831
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 74680 TGGCGTGACGCGGCCGAGAATGCCGCAGAGTCGCTTG-ACAAGGGCACTCGAGTGATCGT 74738
|||||| | ||||||||||| | ||| ||||| |||| | |||| || || ||||
Sbjct 269 TGGCGTCAGGCGGCCGAGAACGTCGCGGAGTC-CTTGCAGCGCGGCATGCGCGTCGTCGT 211
Query 74739 CCAGGGGCGTCTCAAGTCCCGGTCATATACCACCAACGAAGGCGAGGATCGAACGGTCCT 74798
|||||| || |||||||| || | || ||| ||| |||||| | || || ||| |
Sbjct 210 CCAGGGACGGCTCAAGTCGCGCACCTACGAGACCCGCGAGGGCGAGAAGCGCACCGTCTT 151
Query 74799 TGAGCTCGAGGTCGATGAGATCGGACCCTCGCTGCAGTGGGCCACTGCTAAGGTTCAGCG 74858
||| |||||||||| ||| |||| || ||| ||| ||||| || ||||| | ||
Sbjct 150 CGAGATCGAGGTCGAGGAGGTCGGGCCGAGCCTGAAGTTCGCCACGGCCAAGGTCAACCG 91
Query 74859 CACCGAACGAGGCGGCGG 74876
| || || |||||||
Sbjct 90 CGCCTCGCGCAGCGGCGG 73
>seq12676
Length=358
Score = 91.5 bits (100), Expect = 9e-14
Identities = 128/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 46265 TCGACGAGACCACGCGCAAGCAGGCCGAGGAGATCGCCAGTCT-GCCATTCATCTACCCC 46323
||||||| ||||| | ||||||| || ||| |||| || | ||| | | | ||
Sbjct 123 TCGACGACCTCACGCTCGCGCAGGCCAAGCAGACCGCCGAGCTCGACAT-CGTGTCGCCG 181
Query 46324 CACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTGCCGTGGGCACGGTGATC 46383
|| | ||||||||||| || || ||| |||||||| | | || || | || |||
Sbjct 182 TACCTGGCGCTGATGCCGGACGCGCACCTGGGCAAGGGAGCGACGGTCGGTTCCGTCATC 241
Query 46384 CCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACATCGGTTGCGGGATG 46440
||||||| |||||| ||||||| || || || || || |||||||| |||||||||
Sbjct 242 CCCACCAGGGACGCGATCATCCCGGCCGCGGTCGGGGTGGACATCGGCTGCGGGATG 298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 312850340569011
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