Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031239.1
Length=59337
Score E
Sequences producing significant alignments: (Bits) Value
seq210609 138 4e-28
>seq210609
Length=1060
Score = 138 bits (152), Expect = 4e-28
Identities = 199/276 (72%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 28240 CGGCGACGCCGCGATGTGGCTGTGGAACAACGCGATCAAACCAGCGTGGGACTCGATACA 28299
||| |||| || |||||||||||||||||||| | | || |||| ||| || |
Sbjct 565 CGGTGACGTCGTGATGTGGCTGTGGAACAACGTCGTGACCCCGGCGTTCGACGGCATCAA 506
Query 28300 GGGCGCGATCGAAAAGGTG--TGGAATTTCGTTCGACCGATATTCGGGAAGATCGGCGAC 28357
|||||| ||| |||| ||| ||||||| ||||| ||||| ||||||||||
Sbjct 505 GGGCGCCATCTCC--GGTGCATGGGATTTCGTAAAGCCGATCTTCGGTCTGATCGGCGAC 448
Query 28358 GCGTTCCGCACAATGGGCGACATCGCGTCGCGGATCGG-GTCGGCGATCAAGGATGCTTT 28416
| | || || ||||||||||| | ||||| | |||| |||||| || ||
Sbjct 447 GGGATCAAAGGGATCGGCGACATCGCAGGCAGCATCGGCGGCGGC-ATCAAGTCGGCGTT 389
Query 28417 CTCCGGTGTCGTCGACGTGATCAAGGCGCCGATCCACGCGATCGGCCGTCTGCTCGCCGC 28476
|||||||||||||||||| ||||||| |||||||||||| |||| |||||||| | |
Sbjct 388 CTCCGGTGTCGTCGACGTACTCAAGGCACCGATCCACGCGGTCGGTCGTCTGCTGTCGTC 329
Query 28477 GCTGCCCGACTCGATTCTCGGTGTCGACATTCCCGG 28512
| | ||||| || ||||| || ||| |||||
Sbjct 328 GATCCCCGAGAAAATCCTCGGCATCACCATCCCCGG 293
Score = 82.4 bits (90), Expect = 3e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 28209 TCGACCTGTTCATGGGCGGGCTACGCGCGGTCGGCGACGCCGCGATGTGGCTGTGGAACA 28268
||||| |||||||| |||||| || |||||||||||||||| |||||| |||||||
Sbjct 728 TCGACGCGTTCATGGCCGGGCTGCGGTTCGTCGGCGACGCCGCGACGTGGCTATGGAACA 669
Query 28269 ACGCGATCAAACCAGCGT 28286
||||||||| || ||||
Sbjct 668 ACGCGATCATGCCCGCGT 651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189132431696954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |