Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031239.1 Length=59337 Score E Sequences producing significant alignments: (Bits) Value seq210609 138 4e-28 >seq210609 Length=1060 Score = 138 bits (152), Expect = 4e-28 Identities = 199/276 (72%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 28240 CGGCGACGCCGCGATGTGGCTGTGGAACAACGCGATCAAACCAGCGTGGGACTCGATACA 28299 ||| |||| || |||||||||||||||||||| | | || |||| ||| || | Sbjct 565 CGGTGACGTCGTGATGTGGCTGTGGAACAACGTCGTGACCCCGGCGTTCGACGGCATCAA 506 Query 28300 GGGCGCGATCGAAAAGGTG--TGGAATTTCGTTCGACCGATATTCGGGAAGATCGGCGAC 28357 |||||| ||| |||| ||| ||||||| ||||| ||||| |||||||||| Sbjct 505 GGGCGCCATCTCC--GGTGCATGGGATTTCGTAAAGCCGATCTTCGGTCTGATCGGCGAC 448 Query 28358 GCGTTCCGCACAATGGGCGACATCGCGTCGCGGATCGG-GTCGGCGATCAAGGATGCTTT 28416 | | || || ||||||||||| | ||||| | |||| |||||| || || Sbjct 447 GGGATCAAAGGGATCGGCGACATCGCAGGCAGCATCGGCGGCGGC-ATCAAGTCGGCGTT 389 Query 28417 CTCCGGTGTCGTCGACGTGATCAAGGCGCCGATCCACGCGATCGGCCGTCTGCTCGCCGC 28476 |||||||||||||||||| ||||||| |||||||||||| |||| |||||||| | | Sbjct 388 CTCCGGTGTCGTCGACGTACTCAAGGCACCGATCCACGCGGTCGGTCGTCTGCTGTCGTC 329 Query 28477 GCTGCCCGACTCGATTCTCGGTGTCGACATTCCCGG 28512 | | ||||| || ||||| || ||| ||||| Sbjct 328 GATCCCCGAGAAAATCCTCGGCATCACCATCCCCGG 293 Score = 82.4 bits (90), Expect = 3e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 28209 TCGACCTGTTCATGGGCGGGCTACGCGCGGTCGGCGACGCCGCGATGTGGCTGTGGAACA 28268 ||||| |||||||| |||||| || |||||||||||||||| |||||| ||||||| Sbjct 728 TCGACGCGTTCATGGCCGGGCTGCGGTTCGTCGGCGACGCCGCGACGTGGCTATGGAACA 669 Query 28269 ACGCGATCAAACCAGCGT 28286 ||||||||| || |||| Sbjct 668 ACGCGATCATGCCCGCGT 651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189132431696954