Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031243.1 Length=42395 Score E Sequences producing significant alignments: (Bits) Value seq153278 140 9e-29 >seq153278 Length=837 Score = 140 bits (154), Expect = 9e-29 Identities = 478/727 (66%), Gaps = 30/727 (4%) Strand=Plus/Plus Query 26263 ACGGGTCGAGCGAGGTGATCGCATCGTGCAGCCGACCCTCGGGCACCTTGGTGTAGATCT 26322 |||||||||| | | |||||| ||| | || | || || ||||||||||| | | Sbjct 91 ACGGGTCGAGGGTGTCGATCGCGCTGTGGCGGCGGCGGTCCGGAACCTTGGTGTACAGCG 150 Query 26323 GCGTCGTCGCGATGGACTTATGACGTAGCAGCTCTTGGACGACGCGAATGTCCGTGCCGT 26382 || | | ||| ||| || || | |||||| || || || | |||| || | Sbjct 151 CGGTTGACTGGATTGACGCGTGGCGCATCAGCTCCTGCACTGTCCGCAGATCCGCACCTT 210 Query 26383 TGTCGAGCAGTGTGGTCGCGTACCAGTGGCGCAGGCAGTGCGGCGTGCCGCGCACCCCGG 26442 |||||||||||| || |||||||||| ||||| |||| || |||||| | || || Sbjct 211 CGTCGAGCAGTGTCGTTCCGTACCAGTGCCGCAGCGAGTGTGGGGTGCCGGGGACATCGA 270 Query 26443 CTCGCTTCATCGTGCGGCCGATGATGTCGGACACCGATTTCGACAGGATGTGCTCGCC-- 26500 | ||| ||||| ||| |||||||||||| || ||||||||| ||| ||||| || Sbjct 271 CGCGCCGCATCGCGCGCCCGATGATGTCGCTGACGGATTTCGACCGGACGTGCTGACCGG 330 Query 26501 --CTCGTGGCCCCGCATCGGGAACCAGTACCCGGCGGCGGGCATCTCCGAGGCCATCTCG 26558 | ||| | || | |||||||| | ||| || ||||||| | |||| ||| Sbjct 331 GGCACGTCGAGTTGC-TGGGGAACCACCATCCGCGGGTGGGCATCGTCTCGGCCGCGTCG 389 Query 26559 ATCAGCAGTGGATGCAGCGGCACCGAGCGCAGCCGTTTGCCCTTGCCCTTGACCCACAGC 26618 | || ||||| |||||||| | || ||| | ||| |||||| | || | |||| Sbjct 390 ACGAGAAGTGGGTGCAGCGGGAGTGACCGCGTCTTGTTGTGCTTGCCGGTCACTCGCAGC 449 Query 26619 ACGCGGGCCGACATG-TCGATGTCCTCGCCACGGATCTTGGCGATCTCATGGACGCGCAG 26677 ||| | | | |||||||||||||| || | || || | || || || || Sbjct 450 -GACGGTTTGGCGGGATCGATGTCCTCGCCGCGCACCTGGGACACGTCTCCCACACGGAG 508 Query 26678 ACCGGCGAGCAAGGC---GAGCAGGATCATGCGCCGCGTC--GACGTCCACATACG-GGT 26731 ||||||||| ||| || |||||||| || ||| | || ||| || | | Sbjct 509 ACCGGCGAG---GGCACACAGAAGGATCATCACGCGGGTCCGGTGGT--GCATCCGCGAT 563 Query 26732 CTGCAGCAAAGCCACCACATCGGCGTCGCTGACCGGTCGCGGCTGGCGATCGGGCAACCG 26791 || |||| || | || ||| | || || || | ||| ||||| ||| Sbjct 564 GTG-AGCAGGATGGGCAGGTGAGCATCGGACATGGGCCGTGGTTCGCGGTCGGGTTGCCG 622 Query 26792 GGGAGCCCCGACTTTCACCATCGGGTTGTCCTCGCGCCGGTCGGTGA-GCTGCAGCCACT 26850 | || ||| ||||||||||| ||||| || ||||| ||| ||||||||||| Sbjct 623 AAGCGCTGGGACCTTCACCATCGGATTGTCGAGACGTCGGTC-CTGACGCTGCAGCCACG 681 Query 26851 TGAACCA--GGCAGACAGGTAGCTGGTGTAGGTGCACGCTGTGGAGTCCGACCAGTCTTC 26908 | ||||| | | ||| ||| ||||| ||| |||||||| | |||||| || Sbjct 682 TAAACCACTGCCGCACATACGACTG--ATAGGTCACCGCGGTGGAGTCGGCCCAGTCGTC 739 Query 26909 ---GTGGTCGGCGATCCAGCGCACGAGGTCGGT-GGCGCGGATCTTCATGGGCTGTACGC 26964 ||| | || ||||| || |||| |||| | || ||| | |||||||| || | Sbjct 740 GCGGTGCTGTGCCATCCACCGAACGATGTCGATCGGTTCGGCGC-GGATGGGCTGCACCC 798 Query 26965 CCGTCTC 26971 | ||||| Sbjct 799 CGGTCTC 805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135096416624022