Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031252.1
Length=51290
Score E
Sequences producing significant alignments: (Bits) Value
seq248049 187 8e-43
seq153771 170 6e-38
seq136878 161 3e-35
seq226360 129 2e-25
>seq248049
Length=1043
Score = 187 bits (206), Expect = 8e-43
Identities = 247/335 (74%), Gaps = 6/335 (2%)
Strand=Plus/Plus
Query 30898 ATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGG 30957
||||| || || || | ||||| ||| |||| ||||||||| |||||| ||||| ||
Sbjct 553 ATGGCAGGCGACACCATCATCACGGTGGTCGGCAACCTGACGGCCGATCCCGAGCTGCGC 612
Query 30958 TTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTC 31017
||||| | || ||| || || ||||||||||| |||| || || || ||| ||
Sbjct 613 TTCACCGCCTCCGGCGCGGCCGTTGCGAACTTCACCGTCGCATCGACCCCCCGGACGCTC 672
Query 31018 GATCG-ACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGC-GCTGCTGTCT 31075
|| || || | ||||||||| ||||||||| | |||||||||||| || | |||
Sbjct 673 GACCGCACCAGCGG-CGAGTGGAAGGACGGCGAGGCCCTCTTCCTGCGCTGCAACA-TCT 730
Query 31076 GGCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAG-GTCATCTGC 31134
|||| || |||| ||||| ||| | ||||| || || | | | | |||||| |
Sbjct 731 GGCGGCAGGCTGCCGAGAACGTCACGGAGTCGCT-CACCCGCGGCTCCCGCGTCATCGTC 789
Query 31135 GTCGGGCGTCTGAAGTCGCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGTCATC 31194
||| || || ||| |||||||| |||||| || || |||||||||||||| ||||||
Sbjct 790 ACCGGCCGGCTCAAGCAGCGCAGCTTCGAGACCAAGGAAGGCGAGAAGCGCACCGTCATC 849
Query 31195 GAGCTCGAAGTCGACAGCATCGGCCCGTCGCTGCG 31229
||||| || |||||| |||||||| ||||||||
Sbjct 850 GAGCTGGAGGTCGACGAGATCGGCCCCTCGCTGCG 884
>seq153771
Length=831
Score = 170 bits (188), Expect = 6e-38
Identities = 213/286 (74%), Gaps = 6/286 (2%)
Strand=Plus/Minus
Query 30926 TCGGAAACCT-GACGAACGATCCAGAGCTACGGTTCACGCCGTCTGGCAGCGCTGTCGCG 30984
|||| ||||| | ||| ||| || ||||| ||||||||||| || ||| ||| |||||
Sbjct 418 TCGGCAACCTCGTCGA-CGACCCCGAGCTGCGGTTCACGCCCTCGGGCGCCGCAGTCGCC 360
Query 30985 AACTTCACGATCGCGAGCACACCGCGAACGTTCGATCGACAGTCAAACGAGTGGAAAGAC 31044
|||||| ||||| ||| ||||| |||||| | || ||| | ||||| ||| | |||
Sbjct 359 AACTTCCGCATCGCCTCCACCCCGCGCACGTTCAACCGTCAGACCAACGACTGGGAGGAC 300
Query 31045 GGCGAGACGCTCTTCCTGCGCGCTGCT--GTCTGGCGCGAGACTGCAGAGAATGTCGCAG 31102
|| ||| | ||||| | | ||||| || ||||| || | || ||||| ||||| |
Sbjct 299 GGTGAGGGCATGTTCCT-CAC-CTGCTCGGTGTGGCGTCAGGCGGCCGAGAACGTCGCGG 242
Query 31103 AGTCCCTGCAGAAGGGCATGGAGGTCATCTGCGTCGGGCGTCTGAAGTCGCGCAGCTACG 31162
||||| ||||| |||||| ||| || | || || || |||||||||| |||||
Sbjct 241 AGTCCTTGCAGCGCGGCATGCGCGTCGTCGTCCAGGGACGGCTCAAGTCGCGCACCTACG 182
Query 31163 AGACGAAAGAGGGCGAGAAGCGCACTGTCATCGAGCTCGAAGTCGA 31208
|||| ||||||||||||||||| ||| ||||| |||| |||||
Sbjct 181 AGACCCGCGAGGGCGAGAAGCGCACCGTCTTCGAGATCGAGGTCGA 136
>seq136878
Length=1830
Score = 161 bits (178), Expect = 3e-35
Identities = 238/332 (72%), Gaps = 4/332 (1%)
Strand=Plus/Minus
Query 30898 ATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGG 30957
|||||||| || || | |||| || ||||| |||||||| ||||| || || ||
Sbjct 405 ATGGCCGGCGACACGATCCTCACCGTCATCGGGAACCTGACCGCGGATCCCGAACTGCGT 346
Query 30958 TTCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTC 31017
||||| ||||| || || || || |||||||| | ||| ||| ||||| | ||||
Sbjct 345 TTCACCCCGTCCGGTGCGGCGGTGGCCAACTTCACCGTTGCGTCCACGCCGCGGATGTTC 286
Query 31018 GATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGC-GCGCTGCTGTCTG 31076
|| || ||| | ||||| ||||||||||||||| | || ||| ||| | || || ||||
Sbjct 285 GACCGTCAGACCAACGAATGGAAAGACGGCGAGGCACTGTTCATGCGGTGCAGC-ATCTG 227
Query 31077 GCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCATCTGCGT 31136
||| ||| | || ||||| || || ||| ||| ||||| |||||| | ||
Sbjct 226 GCGGGAGGCGGCCGAGAACGTGGCGGAGAGCCTCACCAAGGGTGCTCGTGTCATC-GTGT 168
Query 31137 CGGG-CGTCTGAAGTCGCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGTCATCG 31195
|||| || || ||| |||| |||||| || ||||| ||||||||||| || |||
Sbjct 167 CGGGTCGGCTCAAGCAGCGCTCCTACGAAACCCGCGAGGGTGAGAAGCGCACGGTGGTCG 108
Query 31196 AGCTCGAAGTCGACAGCATCGGCCCGTCGCTG 31227
||||||| ||||| |||| || ||||||
Sbjct 107 AGCTCGAGGTCGAGGAGGTCGGTCCCTCGCTG 76
>seq226360
Length=376
Score = 129 bits (142), Expect = 2e-25
Identities = 226/326 (69%), Gaps = 24/326 (7%)
Strand=Plus/Plus
Query 30899 TGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGGT 30958
||||||| || || | ||||| ||| |||| ||||||||| ||| || ||||| || |
Sbjct 7 TGGCCGGCGACACGATCATCACGGTGGTCGGCAACCTGACGGCCGACCCGGAGCTGCGCT 66
Query 30959 TCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTCG 31018
||||| | || ||| || ||||||||||| ||||| ||||| || || |
Sbjct 67 ACACGCAGAGCGGGCTCGCCGTGGCGAACTTCACCATCGCCAGCACCCCCCGCANN---- 122
Query 31019 ATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGC-TGCTGTCTGG 31077
|||||||| ||||||||| | || ||||| || || | ||| ||||
Sbjct 123 --------------GAGTGGAAGGACGGCGAGGCCCTGTTCCTCCGGGCCTCCTG-CTGG 167
Query 31078 CGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCATCTGCGTC 31137
|| ||| || ||| | ||||| | ||| ||| ||||||| |||||| |||
Sbjct 168 CGTGAGTTCGCCGAGCACGTCGCCGGGTCGCTGACCAAGGGCAGCCGCGTCATC-GCGCA 226
Query 31138 GGGC-GTCTGAAGTCGCGCAGCTACGA-GACGAAAGAGGGCGAGAAGCGCACTGTCATCG 31195
|||| | |||||| |||| |||||| ||| || ||| | |||||||| | ||||
Sbjct 227 GGGCCGCCTGAAGCAGCGCTCCTACGACGACCGC-GATGGCAACAAGCGCACCGCGATCG 285
Query 31196 AGCTCGAAGTCGACAGCATCGGCCCG 31221
||||||| |||||| |||||||||
Sbjct 286 AGCTCGAGGTCGACGAGATCGGCCCG 311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163466759799192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |