Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq435 113 2e-20 seq276163 91.5 7e-14 seq148523 87.8 9e-13 seq122783 87.8 9e-13 >seq435 Length=5833 Score = 113 bits (124), Expect = 2e-20 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 32891 GGGGCGGTAGCTCAGTCGGTTAGAGCCACGGACTCATAATCCGTTGGTCGTGGGTTCGAG 32950 ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| Sbjct 4776 GGGGCGGTAGCTCAGTCGGTTAGAGCCGCGGACTCATAATCCGTAGGTCGCGGGTTCGAG 4717 Query 32951 CCCCACCCGCCCTAC 32965 |||| ||||||| || Sbjct 4716 CCCCGCCCGCCCCAC 4702 >seq276163 Length=306 Score = 91.5 bits (100), Expect = 7e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 32891 GGGGCGGTAGCTCAGTCGGTTAGAGCCACGGACTCATAATCCGTTGGTCGTGGGTTCGAG 32950 ||||||||||||||| ||| ||||| ||||||||||||| | |||||||||||| || Sbjct 210 GGGGCGGTAGCTCAGCTGGTCAGAGCAGGGGACTCATAATCCCTGGGTCGTGGGTTCAAG 151 Query 32951 CCCCACCCGCCCTAC 32965 |||||||||||| || Sbjct 150 CCCCACCCGCCCCAC 136 >seq148523 Length=1916 Score = 87.8 bits (96), Expect = 9e-13 Identities = 69/82 (84%), Gaps = 3/82 (4%) Strand=Plus/Plus Query 52929 CGGCATGAAGGCGCTGACGGTACAGCAGCCGTGGGCCTGGGCCATCTTCTACGGC---AA 52985 || |||||||||| ||||||| |||||||||||||| ||||| ||| | ||||| || Sbjct 1471 CGTCATGAAGGCGTTGACGGTGCAGCAGCCGTGGGCGTGGGCGATCGTGCACGGCGGGAA 1530 Query 52986 GCTGATCGAGAACCGGACCCAG 53007 ||||||||||||||| || ||| Sbjct 1531 GCTGATCGAGAACCGCACACAG 1552 >seq122783 Length=2056 Score = 87.8 bits (96), Expect = 9e-13 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 32891 GGGGCGGTAGCTCAGTCGGTTAGAGCCACGGACTCATAATCCGTTGGTCGTGGGTTCGAG 32950 ||||||||||||||| ||||||||| |||||||||||||||| |||| |||||| || Sbjct 114 GGGGCGGTAGCTCAGCTGGTTAGAGCAGCGGACTCATAATCCGTCGGTCACGGGTTCAAG 173 Query 32951 CCCCACCCGCCCTACAAA 32968 ||| ||||||||| || Sbjct 174 TCCCGTCCGCCCTACCAA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248096950405059