Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031255.1
Length=46895
Score E
Sequences producing significant alignments: (Bits) Value
seq243147 172 2e-38
seq180939 134 4e-27
seq136770 122 3e-23
seq210609 93.3 1e-14
>seq243147
Length=590
Score = 172 bits (190), Expect = 2e-38
Identities = 356/521 (68%), Gaps = 9/521 (2%)
Strand=Plus/Plus
Query 6719 GAACACCGCGCCGCACGA-GGACTGGGTCGAGTACGCGGTTTCCACCGGTCTCGATCGCA 6777
||||||||||||| ||| || |||||| ||| || ||| || || ||
Sbjct 30 GAACACCGCGCCG-ACGCCGGTGCTGGTCGACTACATCGTGTCCCAGGGCACCGCGCGTG 88
Query 6778 CCGAGGCCGCGGCCATGGAGCGCGCCGAGCTGATCAAGGCGCTGTCGTGAGCGAGGGCGC 6837
||||||||| ||| ||| ||||| || ||||||| ||||||| |||||| | || |
Sbjct 89 CCGAGGCCGAGGCGATGAGTCGCGCGGACCTGATCAGGGCGCTGGCGTGAGTGGTGGGGG 148
Query 6838 GCCGTTCGTGACAGTCACCGAACTGGCCGCGAGC-TGGCGCGCCCTCACCACTCAGGAGC 6896
| |||| |||| | || | | | | | || |||||| |||||||| || |||
Sbjct 149 GGCGTTTCTGACCG-CAGAGCAGTTTCAGTCTGCGTGGCGCCCCCTCACCCGCGAGCAGC 207
Query 6897 AGACCTACGCCACCGATCTGCTGAATGCGGCCGCTGAGAAGATCCGCGCCGAGTACCGCA 6956
| |||||| | || || || |||| | ||| ||| || | |||||||||||
Sbjct 208 TGGTGTACGCCGCGGACTTGTTGGCGTCGGCGGGTGACTGGATTCGAGACGAGTACCGCA 267
Query 6957 AGGCCTTCGCCGCCGAGATCGAACAGTCGAATCCGGCGGCACGCACGGTCTCGATCGACA 7016
||||| | | ||| |||| | | || | ||||| || ||||| |||||||||
Sbjct 268 AGGCCAAGGGTGTCGACATCGCCGACACCAACGCCGCGGCCCGAACGGTGTCGATCGACG 327
Query 7017 TGGTCAAGACCGCGATTCAGACCGGCGCGTACGTCGGGCACATTCAG-TACGGCCGCATC 7075
|||| ||||| ||||| ||||||||| || || |||| |||| ||| |||| |
Sbjct 328 TGGTGAAGACTGCGATCTCGACCGGCGCCTATCAGGGCCACA-TCAGCTACAACCGCGTG 386
Query 7076 GAGGGCCAGCGGCAGAAGTCCGGCCGGCTCCTCAACCCCGGCGGCGCCCTGGTGCTCACC 7135
|| || | ||||||||||| || || |||| || || || || ||| | |||||
Sbjct 387 GAAGGTCCCCGGCAGAAGTCGGGTGTCCTGATCAATCCGGGTGGGGCGCTGTCGTTCACC 446
Query 7136 GACTACCACCGCGAGCAGCTGGGCATCCCGACTCGGGCGCTCGCGCAGGCCTGTTTCGAC 7195
|||| ||| ||||||||||||||| | || || ||||| |||||| | ||
Sbjct 447 GACTGGCACAAGTCGCAGCTGGGCATCCCCATTCACGCTCTCGCACAGGCCACGTGGGAG 506
Query 7196 GACGCGAGTGATGCTCGGTTCTGAAAC---CTGCGTGCTCG 7233
||| | ||||||||||| |||| || | ||||||||
Sbjct 507 GACACTCCTGATGCTCGGTACTGAGACGGTCGTCGTGCTCG 547
>seq180939
Length=538
Score = 134 bits (148), Expect = 4e-27
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 778 CTGGACGCACCCGTCGTGCTGCCTGATCGTTCCCCGCCAGTCGGGGAAGTCTGAGCTGCT 837
||||||||||||| ||||||| ||||||| || || ||| || ||||| ||| | ||
Sbjct 218 CTGGACGCACCCGGAGTGCTGCTTGATCGTCCCGCGGCAGAACGGTAAGTCCGAGGTTCT 159
Query 838 GATCCTCCGGTGCCTGTACGGGCTGCTCGCGCGCGGCGAGAAGATCATCTTCACCACTCA 897
| | || ||||||||||||||| || ||| |||||||||||| || | ||||| || ||
Sbjct 158 GTTGCTGCGGTGCCTGTACGGGATGTTCGTGCGCGGCGAGAACATTGTGTTCACGACGCA 99
Query 898 GCGCTGGGAGACTGCACTCGAGCTCGGCGA-GCGCATGATCGCGATGATCAACGACCGGC 956
||| ||| |||| |||| ||| |||| ||| | | ||| |||||||||| || |
Sbjct 98 GCGGTGGAAGACAGCACGACTGCT-GGCGCTGCGGTTCAACGCCATGATCAACGCGCGCC 40
Query 957 CATCGTTGAAACGCCGCCTGGCCACGAAGCCGACGA 992
| ||| | || | || || | |||||||||||
Sbjct 39 CGTCGCTCAAGGCCAAGCTCGCGAAGAAGCCGACGA 4
>seq136770
Length=900
Score = 122 bits (134), Expect = 3e-23
Identities = 207/296 (70%), Gaps = 8/296 (3%)
Strand=Plus/Plus
Query 1119 TCGACCTGATCGTCTACGACGAGGCGTACAACCTCACCAGCGGGCAACGGTCA-GCGCTC 1177
|||||||| | ||||||||||||| |||||| ||||| |||| || | | |||||
Sbjct 13 TCGACCTGCTGATCTACGACGAGGCCTACAACGTCACCGGCGG-CATGGAAGATGCGCTG 71
Query 1178 GCGTGGACCCAGATGGCCGCGGACTCCACGCAGAAGATCTACACCTCCAGCGCTGTCGAC 1237
| ||| | |||||||||||| || | |||||| ||||||||| | || ||| ||
Sbjct 72 GACTGGGCGCAGATGGCCGCGAACAACCCGCAGACCATCTACACCAGCTCGGCGGTCAAC 131
Query 1238 GAACTCGAGCACCCGAAGGGCCACGCGCTCGCCGGCATCCGGCGCCGCGGACTCGCCAAG 1297
| | ||||| || || || | || || | || || || ||||| ||||| ||
Sbjct 132 GCCCAGATCCACCCCAACGGACAGACACTGGCGCGGATGCGCCGGCGCGGCCTCGCGAAA 191
Query 1298 GGCCGCGGCCTGGCCTTCCGCGAGTACATGGCACCGCCCGCG---CTGCCCTGGAATTCC 1354
|||| | | | |||| ||||| ||||| |||||| | || ||||| | ||
Sbjct 192 GGCCCCCGGTTCTACTTCGCCGAGTTCATGG---CGCCCGAGGACATGGCCTGGGACTCG 248
Query 1355 CACGAGGCCGCGCGGTACGCATGCCCGAGCTACGGCGTGATCCAGACCGACGACAA 1410
|||| |||| ||| || ||| ||||||||||| |||||||||||||| ||
Sbjct 249 TTCGAGACCGCACGGATGGCCAACCCCAGCTACGGCGTCATCCAGACCGACGAGAA 304
>seq210609
Length=1060
Score = 93.3 bits (102), Expect = 1e-14
Identities = 212/315 (67%), Gaps = 13/315 (4%)
Strand=Plus/Minus
Query 13431 GAACGTCATAGTCC-CAGCGTGGAACGGCATCAAGGCCGCGATCGGTGTC----GCATGG 13485
|||| || | |||| | || ||| ||||||||||| |||| ||||| || |||
Sbjct 805 GAACATCGT-GTCCGCGGCCTGGGACGGCATCAAGATCGCG----GTGTCCGCGGCGTGG 751
Query 13486 ACAC---TGATCAAGGGCTACTTCTCGGTGTGGATGGCGGTGATCCGCGCCCTCGCTGGC 13542
||| |||||||| | | || | || ||||| | | | || | ||| | |
Sbjct 750 ACAGGAGTGATCAAGCCCGCCGTCGACGCGTTCATGGCCGGGCTGCGGTTCGTCGGCGAC 691
Query 13543 GTGGTGATGTGGCTGTGGAACAACATCGTCTCCCCCGCGTTCAACGGAATCAAGGCCGTA 13602
| | || |||||| ||||||||| || |||||||||||||| ||| ||||
Sbjct 690 GCCGCGACGTGGCTATGGAACAACGCGATCATGCCCGCGTTCAACGGGATCGGCACCGTC 631
Query 13603 ATCGGTTTCGTGTGGGGCGGTATCAAGTTCTACTTCGACGCCTTTATGGCCGTCCTGCGC 13662
|||||| || |||| ||| | ||| || |||||||| || | | |||||||| |
Sbjct 630 ATCGGTGTCTGGTGGTCCGGCGTGAAGGTCATCTTCGACGTCTGGAAGACCGTCCTGACC 571
Query 13663 GTGATCGGTGGCGTCGCAAACTGGTTGTGGCAGAACGTCATGGTGCCGGTGTGGAACGGC 13722
| ||||| ||||| | ||| ||||| | |||||| || |||| || |||||
Sbjct 570 GGTGCCGGTGACGTCGTGATGTGGCTGTGGAACAACGTCGTGACCCCGGCGTTCGACGGC 511
Query 13723 ATCAAGGCCACGATC 13737
||||||| | | |||
Sbjct 510 ATCAAGGGCGCCATC 496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149449035431022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |