Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031256.1 Length=53486 Score E Sequences producing significant alignments: (Bits) Value seq4597 104 8e-18 >seq4597 Length=157418 Score = 104 bits (114), Expect = 8e-18 Identities = 128/173 (74%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 35796 TCGTCCACCTCGACCGAGATGTTCGTCGTCCAGTGCTC--ACCGGAGGTGGCCTTGATGT 35853 ||||| |||||||| ||||||||||| |||||||| ||| || ||||||| || Sbjct 124419 TCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACC--AGTCGGCCTTGCAGT 124476 Query 35854 TGATGAACTCCTCGACCTGCGAGTCCTTCCAGTGCATCATCGACATCCGGGCAGACCGGC 35913 ||||||| || ||| | || ||| | |||| |||||| | ||| || || ||||| | Sbjct 124477 TGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGAC 124536 Query 35914 GAACGCCGCCGGCCACCACGCACGAAGCGATGGCGTGGTCGATCTCCATCGCC 35966 | | || || || || ||| | | |||||| |||||||||||| ||| ||| Sbjct 124537 GTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589 Score = 91.5 bits (100), Expect = 5e-14 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 36487 CCCACAGGTGTCGGCCGGCCGGCAGCAGCTTGAACTGCGACATCAGCCGGATCAGTTGGG 36546 |||||||||| || |||||||| |||| |||||| | | ||||| || || | Sbjct 125098 CCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCT 125157 Query 36547 CTCGCTCATCAGGTAGCT-GGTACCGAACGTCAACGAGTCCCAGGTTGCCATCCACCACT 36605 | ||||| | || ||| ||| | ||| | || ||||||||||| || ||||| Sbjct 125158 CACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAG-CCCAGGTTGCCGTCGACCACA 125216 Query 36606 CGCTCGACGGTCTCGGGCCAGGTCTCCTTGGTGCCGTCTGGCTTGGTGCGGGCGTAGGTT 36665 || |||||||||| ||| |||||||| || ||||| |||||| |||| |||||| Sbjct 125217 CGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTC 125276 Query 36666 CGCTTGTAGACC 36677 || | ||| ||| Sbjct 125277 CGGTCGTATACC 125288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170470837777008