Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031261.1
Length=48670
Score E
Sequences producing significant alignments: (Bits) Value
seq249899 123 8e-24
seq184310 109 2e-19
>seq249899
Length=916
Score = 123 bits (136), Expect = 8e-24
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 3005 CGAGTACCACGACCACCAGATGGCGCTTGTCGCCCTGGCGCATTTCCTCAACCTCGACGG 3064
|||| ||||||| | ||| ||| ||| || |||| | |||||||||||||||
Sbjct 156 CGAGGGCCACGACAAGGCGATTGCGATTGCCGGGTTGGCCAACCACCTCAACCTCGACGG 97
Query 3065 CAAGGGCGGCAGCTACGCGCTCGCCAGCGTGCAGGCCGACACGTTCGTGCAGTCGGTGCA 3124
|||||||||||| ||||| || |||||||||||| |||| |||||||||||||| | |||
Sbjct 96 CAAGGGCGGCAGTTACGCCCTGGCCAGCGTGCAGTCCGATACGTTCGTGCAGTCCGAGCA 37
Query 3125 GACCGTCGCCGAC 3137
||||| ||||||
Sbjct 36 GACCGAGGCCGAC 24
>seq184310
Length=1059
Score = 109 bits (120), Expect = 2e-19
Identities = 149/201 (74%), Gaps = 13/201 (6%)
Strand=Plus/Plus
Query 2247 CGCGAGGAGGCGCGAATCGCCTCGGTGCTGCGCGCGATCGGGCTGCCGATCCGCCGCACC 2306
|||||||| || | || ||||||| ||| |||| | |||||||||||| ||||||
Sbjct 61 CGCGAGGACGCCCAGGTCACCTCGGTCCTGACCGCGGTGCAGCTGCCGATCCGGCGCACC 120
Query 2307 GACTGGCGGAT-CCGCCCGAACGGCGCCCGCCCCGAGGTGGTCGAGCACGTCGCCGCCTG 2365
| |||||| | ||| | |||||||| ||||| ||||| |||| || ||||| ||| ||
Sbjct 121 CAGTGGCGGGTGTCGCGC-AACGGCGCTCGCCCGGAGGTCGTCGCGCTCGTCG-CGCGTG 178
Query 2366 -CCTCGGTCTGCCGGTCGAGGGCGATGAATCCGA-CAGGCCGA--CGCCGCGC------A 2415
|| ||||||| |||||||||| | || ||||||| |||||||| |
Sbjct 179 ATCTGAATCTGCCGATCGAGGGCGAGTCCGCGGAGGAGGCCGACGCGCCGCGCGGCCGGA 238
Query 2416 CCCGGGGCCGGTTCTCGTGGG 2436
|||| ||||| ||||||||||
Sbjct 239 CCCGTGGCCGATTCTCGTGGG 259
Score = 93.3 bits (102), Expect = 1e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 3139 AGATCCGCGACGTCGCGCAGGCGCACGTCGTCGAGGACATCGTTGACGTCAACTGGGGCG 3198
||||| ||||| |||| | |||| | ||||||||| |||||||| ||||||||
Sbjct 917 AGATCTGCGACATCGCCAACCAGCACATAGTCGAGGACCTCGTTGACTGGAACTGGGGAC 976
Query 3199 AGGACGAACCTGCGCCGCTGCTGGTGTTCGACGAGATCGGCTCGCGCCAGGACGCG 3254
||||| | || |||||||||||||||||||||||||| |||| || | ||||
Sbjct 977 CCGACGAGCAGGCACCGCTGCTGGTGTTCGACGAGATCGGTTCGCAGCACGCCGCG 1032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155110346182672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |