Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031267.1
Length=42979
Score E
Sequences producing significant alignments: (Bits) Value
seq219746 141 3e-29
seq275020 84.2 6e-12
>seq219746
Length=1062
Score = 141 bits (156), Expect = 3e-29
Identities = 234/338 (69%), Gaps = 0/338 (0%)
Strand=Plus/Plus
Query 37999 ATCGCCTGGCTATCCCCATCCTGCACGAAACACTCCATCGCCCAGGGCAAACGGCAAGCC 38058
|| || ||| | ||||| || ||||| | ||||| |||||||||||| || |||
Sbjct 4 ATGGCGTGGTTCTCCCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCC 63
Query 38059 GACAAGCAACCCGACCTGTTCGGCGAAACCCTCCCAGATGCCGCGGCCGAACGATCCCGC 38118
||||||| ||||||| ||| || | || || | ||| |||||||| || ||
Sbjct 64 GACAAGCGCCCCGACCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGG 123
Query 38119 GCCACCATGTGGGACGTCGTCCGCTTCGCCGAGTATCACGCCTATGAAGCTGTCATCGTC 38178
|| || ||||||||||||||||| ||||||||||| ||| || | | || |||||
Sbjct 124 GCGACGATGTGGGACGTCGTCCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTC 183
Query 38179 GAGAACGTCGTCGAGGTCACCGCCTGGCCGCCCTACCAAGCGTGGCTGGCCGCCATGGAC 38238
|| ||||| ||||| || ||||||| | | ||||||| ||||| | ||||
Sbjct 184 GAAAACGTTGTCGACGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGAC 243
Query 38239 TCGTTGGGCTATCAGCACCAGGTGCTCATGCTCAACTCGATGCACGCCCACGCATACGGT 38298
| ||||||| | ||| || | | |||||||||||||||||| || | ||||
Sbjct 244 GCCCTGGGCTACAACCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGT 303
Query 38299 ACGGGTGCACCGCAGTCACGGGACCGCTTCTACGCCGT 38336
| || || || ||| ||||| | |||| | |||
Sbjct 304 CAGCCGGCCCCTCAATCAAGGGACAGGATCTATGTCGT 341
Score = 116 bits (128), Expect = 1e-21
Identities = 103/129 (80%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 38533 CGTCCGGCCGCCGACATCATCGACTGGACCCTTGAAGGCACCCGCATCGGGGACCGCGGC 38592
|| || ||||| ||||||||||||||| | || |||||||||||||| ||||||
Sbjct 514 CGACCCGCCGCAGACATCATCGACTGGTCGCTGCCCGGCACCCGCATCGGTGACCGCAAA 573
Query 38593 CGACCGCTCGCTGATAAGACGATGGCGCGTATCCAGGCCGGCATCGACCGATACTGGGCG 38652
|| ||||| || || ||||| ||| | |||||||||||||| |||||||| |||||||
Sbjct 574 CGCCCGCTGGCCGAGAAGACCATGACCCGTATCCAGGCCGGGATCGACCGCTACTGGGGA 633
Query 38653 CCACTCCTC 38661
|| |||||
Sbjct 634 CCGTTCCTC 642
>seq275020
Length=439
Score = 84.2 bits (92), Expect = 6e-12
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 30859 CGCAACGTGAGCTCGGAATGCTCGTCCGGCGGACCCAGACCACGATCTGGAAGCTCGAGA 30918
|||| ||||| || | | || || || || || ||||||||||||| | | |||
Sbjct 9 CGCAGCGTGACCTTGCGTTTCTGGTGCGCCGCACGCAGACCACGATCTACGCGATTGAGG 68
Query 30919 CCGGGCAGCTGAAGAACATCAAGGAAGACCTCGCCCTGGCGATCGCGGCGCGCCTCGAAT 30978
|||| |||||| | | ||| || || ||||| ||||||||||||| || |||||
Sbjct 69 CCGGCAAGCTGACCACCCTCACCGAGGATCTCGCGTTGGCGATCGCGGCCCGTCTCGACG 128
Query 30979 GCCATTGGGAGGACTTGTTCATCGCCCATGA 31009
|| ||||||||| ||||| |||||| ||
Sbjct 129 TCCCGTGGGAGGACCTGTTCGACGCCCACGA 159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136959067598086
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |