Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031267.1 Length=42979 Score E Sequences producing significant alignments: (Bits) Value seq219746 141 3e-29 seq275020 84.2 6e-12 >seq219746 Length=1062 Score = 141 bits (156), Expect = 3e-29 Identities = 234/338 (69%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 37999 ATCGCCTGGCTATCCCCATCCTGCACGAAACACTCCATCGCCCAGGGCAAACGGCAAGCC 38058 || || ||| | ||||| || ||||| | ||||| |||||||||||| || ||| Sbjct 4 ATGGCGTGGTTCTCCCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCC 63 Query 38059 GACAAGCAACCCGACCTGTTCGGCGAAACCCTCCCAGATGCCGCGGCCGAACGATCCCGC 38118 ||||||| ||||||| ||| || | || || | ||| |||||||| || || Sbjct 64 GACAAGCGCCCCGACCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGG 123 Query 38119 GCCACCATGTGGGACGTCGTCCGCTTCGCCGAGTATCACGCCTATGAAGCTGTCATCGTC 38178 || || ||||||||||||||||| ||||||||||| ||| || | | || ||||| Sbjct 124 GCGACGATGTGGGACGTCGTCCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTC 183 Query 38179 GAGAACGTCGTCGAGGTCACCGCCTGGCCGCCCTACCAAGCGTGGCTGGCCGCCATGGAC 38238 || ||||| ||||| || ||||||| | | ||||||| ||||| | |||| Sbjct 184 GAAAACGTTGTCGACGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGAC 243 Query 38239 TCGTTGGGCTATCAGCACCAGGTGCTCATGCTCAACTCGATGCACGCCCACGCATACGGT 38298 | ||||||| | ||| || | | |||||||||||||||||| || | |||| Sbjct 244 GCCCTGGGCTACAACCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGT 303 Query 38299 ACGGGTGCACCGCAGTCACGGGACCGCTTCTACGCCGT 38336 | || || || ||| ||||| | |||| | ||| Sbjct 304 CAGCCGGCCCCTCAATCAAGGGACAGGATCTATGTCGT 341 Score = 116 bits (128), Expect = 1e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 38533 CGTCCGGCCGCCGACATCATCGACTGGACCCTTGAAGGCACCCGCATCGGGGACCGCGGC 38592 || || ||||| ||||||||||||||| | || |||||||||||||| |||||| Sbjct 514 CGACCCGCCGCAGACATCATCGACTGGTCGCTGCCCGGCACCCGCATCGGTGACCGCAAA 573 Query 38593 CGACCGCTCGCTGATAAGACGATGGCGCGTATCCAGGCCGGCATCGACCGATACTGGGCG 38652 || ||||| || || ||||| ||| | |||||||||||||| |||||||| ||||||| Sbjct 574 CGCCCGCTGGCCGAGAAGACCATGACCCGTATCCAGGCCGGGATCGACCGCTACTGGGGA 633 Query 38653 CCACTCCTC 38661 || ||||| Sbjct 634 CCGTTCCTC 642 >seq275020 Length=439 Score = 84.2 bits (92), Expect = 6e-12 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 30859 CGCAACGTGAGCTCGGAATGCTCGTCCGGCGGACCCAGACCACGATCTGGAAGCTCGAGA 30918 |||| ||||| || | | || || || || || ||||||||||||| | | ||| Sbjct 9 CGCAGCGTGACCTTGCGTTTCTGGTGCGCCGCACGCAGACCACGATCTACGCGATTGAGG 68 Query 30919 CCGGGCAGCTGAAGAACATCAAGGAAGACCTCGCCCTGGCGATCGCGGCGCGCCTCGAAT 30978 |||| |||||| | | ||| || || ||||| ||||||||||||| || ||||| Sbjct 69 CCGGCAAGCTGACCACCCTCACCGAGGATCTCGCGTTGGCGATCGCGGCCCGTCTCGACG 128 Query 30979 GCCATTGGGAGGACTTGTTCATCGCCCATGA 31009 || ||||||||| ||||| |||||| || Sbjct 129 TCCCGTGGGAGGACCTGTTCGACGCCCACGA 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136959067598086