Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031269.1
Length=51884
Score E
Sequences producing significant alignments: (Bits) Value
seq157980 307 3e-79
seq139445 199 1e-46
seq46609 167 8e-37
seq180939 114 4e-21
seq184310 91.5 5e-14
seq6603 91.5 5e-14
seq272250 84.2 7e-12
>seq157980
Length=2738
Score = 307 bits (340), Expect = 3e-79
Identities = 536/773 (69%), Gaps = 39/773 (5%)
Strand=Plus/Minus
Query 36347 GGCATCCACGTCATCGCCGCGACGACCGCCGAGAAGGGTCTCGAGGTCGAGGTCGTCGAC 36406
||| ||||||| ||||||| |||||| ||| |||||| || ||| |||||||||
Sbjct 1711 GGCGTCCACGTGTTCGCCGCCACGACCAAGGAGCGGGGTCTGCAGACCGACGTCGTCGAC 1652
Query 36407 CTCCGCGAGTTCATCCCCGGTGTGACGCGGTCCGCCGAGTCGGGCACCCGCCTGGTCACC 36466
||||| ||| | | ||||| || | ||| ||||| | ||||| ||| | ||||||
Sbjct 1651 CTCCGTCAGTACGTGCCCGGGCTGCTGTCGTCGCCCGAGGCCGGCACTCGCATCGTCACC 1592
Query 36467 GACGTCCCGTCATTCCTCGCCGAACTCGACCGGTACAGCATCGATCCCGACTTC-TCGAC 36525
|||||| ||| ||| || || |||||||| |||| ||||| ||| | |||||
Sbjct 1591 GACGTCGTGTCGTTCGAGGCTGAGCTCGACCGCTACAAGCTCGATGA-GACCGCGTCGAC 1533
Query 36526 ACTGTGGGGCGACGAGACGAAGGGCCGCGTCGAAGCCGTCTACAACGATCACGCAAACGA 36585
|||||||| ||||||| ||||||||||| | || |||||||||| |||| ||||
Sbjct 1532 GCTGTGGGGTGACGAGAACAAGGGCCGCGTGGTCGCGATCTACAACGACCACGTGAACGC 1473
Query 36586 CGGCGCCGGCCTC---------------CGCGACAACCGCCTGCGCCTCGAACTGCGTGC 36630
|| || ||| || ||||||||||| |||| || | || ||| |
Sbjct 1472 CGCCGACGGTGTCGACGGGCACGGTCACCGCGACAACCGTCTGCAGCTGCAGCTCCGTCC 1413
Query 36631 CGACGACGACTGGGTCGCATGGCACCGACTGTCCGGTAAGTTCCTCCCGCAGATCGAGTT 36690
|||||| ||||||| || |||||| | ||||| | || | |||| ||| |||||
Sbjct 1412 CGACGAGGACTGGGCGGCCTGGCACAAGATTTCCGGGAGGTACATCCCTCAGGCGGAGTT 1353
Query 36691 CGGCGACGCCGTGGAGGAACTCCTTCACACCGTCGTCGACCCGGACCAGGCCGACCTCGT 36750
||||||| | | ||||| ||||| |||||||| ||| || |||||||||||||||||
Sbjct 1352 CGGCGACATCATCGAGGACCTCCTGCACACCGTGGTCTCACCCGACCAGGCCGACCTCGT 1293
Query 36751 CGAGGTCATCAACTCGATCCGCGCCACCAGCAAGGGCGTGTTCGAGTCCACAGTCGACCG 36810
|||||||||| |||| |||||| |||| |||| || |||||||||||||| || |||
Sbjct 1292 CGAGGTCATCGACTCCATCCGCACCACGAGCAGCGGGGTGTTCGAGTCCACCATCCGCCG 1233
Query 36811 -GTCGAACGGCTCGCAGGCACTCGAGTACCGCAACGAGACCAGCGCGACCGCCGGCGCCG 36869
| || ||| | ||||| ||||||| |||| | || || | || || | |||
Sbjct 1232 CGACG-TCGGTACCCAGGCGCTCGAGTTCCGCGAGGA------CGTGTCCACCAGTGCC- 1181
Query 36870 CTGGCCGAGC---ATCGCGCCTGGAAATCCCGC-AGACCGTAACCCTGGCCATCCGCCCG 36925
|| ||| | ||| ||| || | || | || | | || || |||| |||
Sbjct 1180 --GGACGAACTCAATC---CCTCGAGGTGCCTCGCGAGC-TGGTGCTCGCACTCCGGCCG 1127
Query 36926 TGGGAAGGGCTCGACACCTACAAGGTCGAAGGCTGGTTCCGGTTCAACCCCGACCACGGG 36985
| || || | || |||||| ||||| | |||||||| |||| | |||| ||
Sbjct 1126 TACGAGGGCATGGAGACCTACGAGGTCCGGGCGTGGTTCCGCCTCAAGGTCCACCAGGGA 1067
Query 36986 CGGCTGCTGCTGACCATCAAGCTCAAGCCCACCCGCAACGTGCTGCGCGCCGCATGGGCG 37045
||||| || || | |||||| || ||||||| ||| |||||| || ||| |
Sbjct 1066 TCACTGCTCCTCGCCGTGAAGCTCCGACCGACCCGCACCGTCCTGCGCCAGGCGTGGTCC 1007
Query 37046 GACGTCATCCAGCAGATCGAAACGCACCTCGGCGGGAAGCCGGTCCTGGCCAC 37098
||| || || | ||||| | ||| | | |||||||||||||||||
Sbjct 1006 GACATCGTCGCCGACATCGAGGCCCACACCACC---AAGCCGGTCCTGGCCAC 957
>seq139445
Length=1680
Score = 199 bits (220), Expect = 1e-46
Identities = 337/480 (70%), Gaps = 15/480 (3%)
Strand=Plus/Plus
Query 3459 GTGCGCATCAACTCGCCCGGCGGCGACGTGTACGACGCGCTGGCCATCACCAACGCGCTG 3518
|| || ||||||||||| |||||| ||||| |||| | || ||| ||||||||||
Sbjct 377 GTCCGGATCAACTCGCCGGGCGGCAGCGTGTGGGACGGCATCGCGATCCTCAACGCGCTG 436
Query 3519 CGCAATCACGACGCGACGGTGACGGTGCAGGTCGACAGCCTCGCCGCCAGCG-CAGCCAG 3577
||| ||| || || ||||| |||||| | |||| || || | |||||
Sbjct 437 CGCGCCCACCGGGCCACCGTGACCACCATCGTCGACGGTGTCGC-GCTGTCGGCGGCCAG 495
Query 3578 CTTCATCGCGATGGCCGGCGACGAGGTCGTGATGTGCCGCAACTCCGAGCTGATGATCCA 3637
||||||||| |||| ||| ||||||||||||||| |||||| | || ||||||| ||
Sbjct 496 CTTCATCGCCATGGGCGGTGACGAGGTCGTGATGATGCGCAACGCGCAGATGATGATTCA 555
Query 3638 CGACGCCCGCGGCTTCTGCATCGGCAGCGCCACCGACATGGCTGAGTACGCCGAATGGCT 3697
|||||| || | || |||||| ||| || ||| || |||| ||| |||
Sbjct 556 CGACGCGTCGGGACTGTGTGTCGGCAATTCCAGTGAGATGCAGGACTACGTCGATCTGCT 615
Query 3698 CGGCCGCGCGAGCGACAACATCGCGTCGATCTACGCCGAGAAGACCGGCGGCGACGCC-A 3756
| | | ||||||||||||||||||||||||||||| ||| |||| ||| ||||| |
Sbjct 616 CCACAAGACCAGCGACAACATCGCGTCGATCTACGCCGACAAGGCCGGTGGC-ACGCCGA 674
Query 3757 AGGACTGGCGCAAGGCGATGAAGGCCGAAACCTGGTACACGGCGGACGAAGCCGTCGAAG 3816
| | |||||| | ||||| |||||||||||||||| | | | ||| || || | |
Sbjct 675 AACAGTGGCGCGCGCTGATGACGGCCGAAACCTGGTACTCCGACGCCGAGGCGGTGCAGG 734
Query 3817 CCGGGCTCGCCGATCGCGTGAAGAGCGACGACACCAAGGACGAGTC---GAAGAAGGCCG 3873
|||| || ||||| || || | | | | | ||||| ||| | || |||| ||
Sbjct 735 CCGGACTGGCCGACCGAGTCGACAAGGGCAAGTCCAAGACCGACACCGGGACGAAGAACG 794
Query 3874 CGGCCCGATTCGACCT-TCGCGTGTTCGCTCACGCCGGCCGCCGCCAGGCGCCGGCCCCG 3932
| |||||||| ||| ||||| |||||||||||||| |||| ||| ||||
Sbjct 795 TG------TTCGACCTGTCG-ATGTTCAACTACGCCGGCCGCCGCGAGGCACCGCGCCCG 847
>seq46609
Length=4533
Score = 167 bits (184), Expect = 8e-37
Identities = 284/407 (70%), Gaps = 20/407 (5%)
Strand=Plus/Minus
Query 3439 TCGACACCGACAACATCCTGGTGCGCATCAACTCGCCCGGCGGCGACGTGTACGACGCGC 3498
||||| |||| | ||| | || | ||||||| |||||||| || | ||| ||
Sbjct 472 TCGACGTCGACGAGATCACGCTGTACGTCAACTCCGGCGGCGGCGGGGTCTCCGAGGCCA 413
Query 3499 TGGCCATC----ACCAACGCGCTGCGCAATCACGACGCGACGGTGACGGTGCAGGTCGAC 3554
| || || |||| | | ||||| ||| | |||| |||||| | | | ||||||
Sbjct 412 TCGCGATGCGGAACCACCTCA-TGCGC---CACAAGGCGAAGGTGACCGCGTACGTCGAC 357
Query 3555 AGCCTCGCCGCCAGCGCAGCCAGCTTCATCGCGATGGCCGGCGACGAGGTCGTGATGTGC 3614
| |||||||| || ||| ||| ||| || || | |||||||||||| ||| ||
Sbjct 356 GGGCTCGCCGCGTCGGCCGCCTCGTTCCTCGTGACGGGTGCCGACGAGGTCGTCATGGGC 297
Query 3615 CGCAACTCCGAGCTGATGATCCACGACGCCCGCGGCTTCTGCATCGGCAGCGCCACCGAC 3674
||| ||||| |||||||||||||||| | | | || ||| || | ||| ||||
Sbjct 296 GAGAACGCCGAGATGATGATCCACGACGCGCTCTCCATCGTCATGGGGAACGCTGGCGAC 237
Query 3675 ATGGCTGAGTACGCCGAATGGCTCGGCCGCGCGAGCGACAACATCGCGTCGATCTACGCC 3734
| | | |||||| ||||| | ||| ||||||||||||||||| |||||
Sbjct 236 CTCCGCGCGGCCGCCGACGAGCTCGACGGCGTCTCGGACAACATCGCGTCGATGTACGCG 177
Query 3735 GAGAAGACCGGCGGCGA---CGCCAAGGACTGGCGCAAGGC---GATGAAGGCCGAAACC 3788
||||| | ||||| || |||| |||||||| ||| ||||| ||||| |||
Sbjct 176 AAGAAGGCGGGCGGGGAGATCGCC---GACTGGCG---GGCCCTGATGATCGCCGAGACC 123
Query 3789 TGGTACACGGCGGACGAAGCCGTCGAAGCCGGGCTCGCCGATCGCGT 3835
||||||||||| || || ||||| || ||||| ||||||||||| ||
Sbjct 122 TGGTACACGGCCGAGGAGGCCGTGGAGGCCGGCCTCGCCGATCGTGT 76
>seq180939
Length=538
Score = 114 bits (126), Expect = 4e-21
Identities = 108/135 (80%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 561 TGGACGCACCCAGAGTGCTGCCTGATCGTTCCGCGGCAGAACGGCAAGTCGCTGATCCTG 620
||||||||||| ||||||||| ||||||| |||||||||||||| ||||| | | |||
Sbjct 217 TGGACGCACCCGGAGTGCTGCTTGATCGTCCCGCGGCAGAACGGTAAGTCCGAGGTTCTG 158
Query 621 GTGATCCGCGTGC-TGTACGGGCTGTTCAAGCTCGGCGAGAACATCGTCTTCTCGGCACA 679
|| | || |||| |||||||| ||||| || |||||||||||| || ||| || | ||
Sbjct 157 TTGCTGCG-GTGCCTGTACGGGATGTTCGTGCGCGGCGAGAACATTGTGTTCACGACGCA 99
Query 680 CCAGTGGGAGACCGC 694
| |||| |||| ||
Sbjct 98 GCGGTGGAAGACAGC 84
>seq184310
Length=1059
Score = 91.5 bits (100), Expect = 5e-14
Identities = 201/294 (68%), Gaps = 18/294 (6%)
Strand=Plus/Plus
Query 2359 AAGCTCGCGCCGCGGCCGCAGCGCACGATCTCGAACTGGAACGTCGCGCTCGACGGCGGC 2418
|||||||||||||| |||||| ||||||||||||| |||||||||||||| || ||
Sbjct 373 AAGCTCGCGCCGCGCCCGCAGAGCACGATCTCGAAGATCAACGTCGCGCTCGATGGTGGA 432
Query 2419 CTGATGTCGATCGAGCAGTACGCGCCAGCGTCGA--ACGGTGTTGTGAAGTACGGGATCA 2476
|| ||||||| |||| | || ||||||| |||||| | ||| |||
Sbjct 433 CTCGAATCGATCGTGCAGCGTCCCCCGGCGTCGATGTCGGTGT--TCAAGGACG------ 484
Query 2477 ACCCGCTGAAGATTCCGATCGGCCGGCTGGTCGTGTACTCGCGCGACCAGGACCCGGGCG 2536
| ||| | || | |||| ||| |||| | ||| | | ||| | |||||
Sbjct 485 AGCCGAT-CGGAGT-CGAT----CGGTTGGTGGCGTATGTGTTCCGTCAGAAACCGGGAT 538
Query 2537 TCTGG-TGGGGCAACTCACTGCTGCGGCCGTCGTACAAGCATTGGCTCCTCAAGGATGAG 2595
||| | |||| || ||||||| ||| | |||||||| ||||| | ||||| ||
Sbjct 539 CGTGGATCGGGC-GGTCGATGCTGCGTCCGGCCTACAAGCACTGGCTGATGAAGGACGAC 597
Query 2596 CTGATCCGCTACCAGGCGGTGGCGATCAAGCGCACCGGGATGGGCGTGCCGGTC 2649
||| ||||| ||| ||| | ||| |||| ||| ||||| ||||||||
Sbjct 598 CTGCTCCGCACCCACGCGACGATGATGCGTCGCAACGGCCTGGGCATGCCGGTC 651
Score = 86.0 bits (94), Expect = 2e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 2948 TCCGCGACACCGCGACCGCCCACATCGTCGAGGACCTCGTCGACATCAACTTCGGCGTCG 3007
|| |||||| ||| | | ||||| |||||||||||||| ||| |||| || ||
Sbjct 920 TCTGCGACATCGCCAACCAGCACATAGTCGAGGACCTCGTTGACTGGAACTGGGGACCCG 979
Query 3008 ACGAGCCCTCACCGCGGCTGGTGTTCGACGAGATCGGTTC 3047
|||||| |||||| ||||||||||||||||||||||||
Sbjct 980 ACGAGCAGGCACCGCTGCTGGTGTTCGACGAGATCGGTTC 1019
>seq6603
Length=23608
Score = 91.5 bits (100), Expect = 5e-14
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 13577 CGCCTCCGGCGGTGTCATGCCCGGCTACACCCCGGGCCGCGACGTGCACCACTTCGCATC 13636
|||| | || ||||| |||| |||||| |||| ||| |||| ||| ||||| ||
Sbjct 5996 CGCCGCTGGTGGTGTGCTGCCGGGCTACTCCCCTGGCTTCGACAACCACACCTTCGTCTC 5937
Query 13637 CCCGACCGGCGGCAACCTCGCCCTGTCGGGTGGCGAGGCGATCATGCGCCCGGAATGGAC 13696
||| || || ||| || |||||| |||||||||||||||||||||||||| |||||
Sbjct 5936 CCCCACTGGTGGCGTGCTGCACCTGTCCGGTGGCGAGGCGATCATGCGCCCGGAGTGGAC 5877
>seq272250
Length=510
Score = 84.2 bits (92), Expect = 7e-12
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 5504 GACGACGAGGAGTTCAACAAGATCTACGTCGGCAACGTCGCCGATC-AGAACATCCGCTA 5562
||| ||||||||||| |||| ||||| | | || | | | | || ||||||||||
Sbjct 15 GACAACGAGGAGTTCCTCAAGGTCTACAAGGACT-CGCTGTCCACCGAGGACATCCGCTA 73
Query 5563 CACCGGCAAGCTGCCGAACAAGGTGCTCAACCTCGACGTGCTCCACTCGCCGCTGTGGCC 5622
|||||||||||| || |||||| ||| || | |||| | | | ||| | | |||||
Sbjct 74 CACCGGCAAGCTACCCCGCAAGGTCCTCGACATGGACGCGATGAAGCCGCGGTTCTGGCC 133
Query 5623 GATCGACCGGGCGCTGGTCGCCGAGCGCGGCACCACCGGCTTCTACGCAGACCCGCGCGC 5682
| ||||| | ||||| |||| | || ||| ||| |||||| ||| | ||| |
Sbjct 134 GCGGGACCGCGTCCTGGTGCTCGAGGGTGGAACCGTCGGGTTCTACAGCGACACCCGCCC 193
Query 5683 GCTGGAGTCGACCGGGATGTACCCGGAGGG 5712
||| || | ||||| ||||| |||||
Sbjct 194 GCTCGAAGCCACCGGCCTGTACGGCGAGGG 223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 165361305481716
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