Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031277.1 Length=52561 Score E Sequences producing significant alignments: (Bits) Value seq4597 114 4e-21 >seq4597 Length=157418 Score = 114 bits (126), Expect = 4e-21 Identities = 134/179 (75%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 34780 GAACTCGTCATCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTC--ACCGGAGGTGGCC 34837 |||| ||| || |||||||| ||||||||||| |||||||| ||| || |||| Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACC--AGTCGGCC 124469 Query 34838 TTGACGTTGATGAACTCCTCGACCTGGGGGTCGTTCCAGTGCATCATCGACATCCGCGCC 34897 ||| ||||||||| || ||| | ||||||| |||| |||||| | ||| ||||| Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529 Query 34898 GACCGGCGCACGCCGCCGGCCACCACGCACGACGCGATGGCGTGGTCGATCTCCATCGC 34956 ||||| || | || || || || ||| | | ||||||| |||||||||||| ||| || Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGC 124588 Score = 100 bits (110), Expect = 1e-16 Identities = 224/331 (68%), Gaps = 23/331 (7%) Strand=Plus/Plus Query 35348 GAGTAGTTCGCTCCGACTCCCCCGCCCTCCATGAGCCGCATGAACGTGA---ACTGGAAG 35404 |||||||| || ||||| || |||||||| | || || | ||| || ||| |||| Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027 Query 35405 TGGTCCGAGATCTTCTCTGGCCACCCCGCCACCCAGCAGTTG------AACAGGTGCTGA 35458 ||||| | |||| | | ||| || | || | |||||| ||| ||| | | Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGCGAGAGAACGGGTTC--A 125085 Query 35459 GCGTTCCGCACGCCCGACGCCCACAGGTGTCGGCCGGCCGGCAGGATCTTGAACTCCGAC 35518 |||||| ||| ||||||||| || |||||||| || |||||||| | | Sbjct 125086 CGGTTCCGGT-----GAC--CCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAG 125138 Query 35519 ATCAGTCGGATCAGTTCGGCTCGCTCATCAGGTAGCT-GATACCGAACGTCAACGAGTCC 35577 ||||| || || || | ||||| | || ||| | | | ||| | || || Sbjct 125139 ATCAGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGCCC 125198 Query 35578 AAGGTTGCCATCGACCACTCGCTCGACGGTCTCGGGCCAGGTCTCCTTGGATCCATCTGG 35637 | ||||||| |||||||| || |||||||||| ||| |||||||| | || || || Sbjct 125199 A-GGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGG 125257 Query 35638 CTTGATTCGAGCGTAGGTCCGGTTGTAGACC 35668 |||||| ||| ||||||||||| ||| ||| Sbjct 125258 CTTGATGCGACTGTAGGTCCGGTCGTATACC 125288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167520577244458