Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031277.1
Length=52561
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 114 4e-21
>seq4597
Length=157418
Score = 114 bits (126), Expect = 4e-21
Identities = 134/179 (75%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 34780 GAACTCGTCATCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTC--ACCGGAGGTGGCC 34837
|||| ||| || |||||||| ||||||||||| |||||||| ||| || ||||
Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACC--AGTCGGCC 124469
Query 34838 TTGACGTTGATGAACTCCTCGACCTGGGGGTCGTTCCAGTGCATCATCGACATCCGCGCC 34897
||| ||||||||| || ||| | ||||||| |||| |||||| | ||| |||||
Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529
Query 34898 GACCGGCGCACGCCGCCGGCCACCACGCACGACGCGATGGCGTGGTCGATCTCCATCGC 34956
||||| || | || || || || ||| | | ||||||| |||||||||||| ||| ||
Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGC 124588
Score = 100 bits (110), Expect = 1e-16
Identities = 224/331 (68%), Gaps = 23/331 (7%)
Strand=Plus/Plus
Query 35348 GAGTAGTTCGCTCCGACTCCCCCGCCCTCCATGAGCCGCATGAACGTGA---ACTGGAAG 35404
|||||||| || ||||| || |||||||| | || || | ||| || ||| ||||
Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027
Query 35405 TGGTCCGAGATCTTCTCTGGCCACCCCGCCACCCAGCAGTTG------AACAGGTGCTGA 35458
||||| | |||| | | ||| || | || | |||||| ||| ||| | |
Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGCGAGAGAACGGGTTC--A 125085
Query 35459 GCGTTCCGCACGCCCGACGCCCACAGGTGTCGGCCGGCCGGCAGGATCTTGAACTCCGAC 35518
|||||| ||| ||||||||| || |||||||| || |||||||| | |
Sbjct 125086 CGGTTCCGGT-----GAC--CCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAG 125138
Query 35519 ATCAGTCGGATCAGTTCGGCTCGCTCATCAGGTAGCT-GATACCGAACGTCAACGAGTCC 35577
||||| || || || | ||||| | || ||| | | | ||| | || ||
Sbjct 125139 ATCAGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGCCC 125198
Query 35578 AAGGTTGCCATCGACCACTCGCTCGACGGTCTCGGGCCAGGTCTCCTTGGATCCATCTGG 35637
| ||||||| |||||||| || |||||||||| ||| |||||||| | || || ||
Sbjct 125199 A-GGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGG 125257
Query 35638 CTTGATTCGAGCGTAGGTCCGGTTGTAGACC 35668
|||||| ||| ||||||||||| ||| |||
Sbjct 125258 CTTGATGCGACTGTAGGTCCGGTCGTATACC 125288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 167520577244458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |