Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031281.1 Length=43516 Score E Sequences producing significant alignments: (Bits) Value seq153278 127 6e-25 >seq153278 Length=837 Score = 127 bits (140), Expect = 6e-25 Identities = 288/429 (67%), Gaps = 7/429 (2%) Strand=Plus/Plus Query 28222 ACGGGTCGAGCGAGGTGATCGCATCGTGCATCCGCCCCTCGGGCACCTTGGTGTAGATCT 28281 |||||||||| | | |||||| ||| || | || || ||||||||||| | | Sbjct 91 ACGGGTCGAGGGTGTCGATCGCGCTGTGGCGGCGGCGGTCCGGAACCTTGGTGTACAGCG 150 Query 28282 GCGTCGTCGCAATGGACTTATGACGTAGCAGCTCTTGGACGACGCGAATGTCCGTGCCGT 28341 || | | || ||| || || | |||||| || || || | |||| || | Sbjct 151 CGGTTGACTGGATTGACGCGTGGCGCATCAGCTCCTGCACTGTCCGCAGATCCGCACCTT 210 Query 28342 TGTCGAGCAGTGTGGTCGCGTACCAGTGACGCAGGCAGTGCGGCGTGCCGCGCACCCCGG 28401 |||||||||||| || |||||||||| ||||| |||| || |||||| | || || Sbjct 211 CGTCGAGCAGTGTCGTTCCGTACCAGTGCCGCAGCGAGTGTGGGGTGCCGGGGACATCGA 270 Query 28402 CTCGCTTCATCGTGCGGCCGATGATGTCGGACACCGATTTCGACAGGATGTGCTCGCC-- 28459 | ||| ||||| ||| |||||||||||| || ||||||||| ||| ||||| || Sbjct 271 CGCGCCGCATCGCGCGCCCGATGATGTCGCTGACGGATTTCGACCGGACGTGCTGACCGG 330 Query 28460 --CTCGTGGCCCCGCATCGGGAACCAGTACCCGGCGGCGGGCATCTCCGAGGCCATCTCG 28517 | ||| | || | |||||||| | ||| || ||||||| | |||| ||| Sbjct 331 GGCACGTCGAGTTGC-TGGGGAACCACCATCCGCGGGTGGGCATCGTCTCGGCCGCGTCG 389 Query 28518 ATCAGCAGTGGATGCAGCGGCACCGAGCGCAGCCGTTTGCCCTTGCCCTTGACCCACAGC 28577 | || ||||| |||||||| | || ||| | ||| |||||| | || | |||| Sbjct 390 ACGAGAAGTGGGTGCAGCGGGAGTGACCGCGTCTTGTTGTGCTTGCCGGTCACTCGCAGC 449 Query 28578 ACGCGGGCCGACATG-TCGATGTCCTCGCCACGGATCTTGGCGATCTCATGGACGCGCAG 28636 ||| | | | |||||||||||||| || | || || | || || || || Sbjct 450 -GACGGTTTGGCGGGATCGATGTCCTCGCCGCGCACCTGGGACACGTCTCCCACACGGAG 508 Query 28637 ACCGGCGAG 28645 ||||||||| Sbjct 509 ACCGGCGAG 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138671813442388