Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 109 1e-18
seq41046 105 2e-17
seq27512 104 5e-17
seq27511 104 5e-17
>seq28654
Length=3315
Score = 109 bits (120), Expect = 1e-18
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | ||||| || |||||||| ||||| ||||| || | | || |
Sbjct 1028 GAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCG 1087
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || ||| || ||||||||||| | || || || | | ||||||||
Sbjct 1088 GCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTC 1147
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||| ||| | || | | ||||||| ||| ||||| | |||
Sbjct 1148 CTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGT 1207
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| ||||| || || || || || || || | ||||||
Sbjct 1208 TATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 1247
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | |||||| ||||||||||||||||||||||| || | | || | ||||||
Sbjct 1491 AGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 1550
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
||||| || || || |||||||| | || || || | | || || || || |||
Sbjct 1551 TCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 1610
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| | || | | |||| || ||| || || ||||| |||||
Sbjct 1611 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTC 1670
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || ||||| || || | |||||
Sbjct 1671 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702
Score = 104 bits (114), Expect = 5e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| || ||||| || ||||| || || ||||| | ||| || | |||||||| ||
Sbjct 2183 ATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAGTTG 2242
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || || ||||||||||| || || | | || || || || ||||| || ||
Sbjct 2243 TTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 2302
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
| || ||| | || | |||| || |||||| || | ||| || ||||| || ||
Sbjct 2303 TGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATGGTTTTTCCTGT 2362
Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105
|||||||| || |||| |||||||
Sbjct 2363 AAGAGTCTTAACAAAGATCTGCATT 2387
Score = 100 bits (110), Expect = 7e-16
Identities = 152/213 (71%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| |||||||| || || || || | | ||| | || ||||| |
Sbjct 2408 CAAG-TGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCA 2466
Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||||| || ||||| || | | || || || | | || |||||||| |||||
Sbjct 2467 ATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 2524
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||||| ||| ||| | || | | || ||| || ||||| | |||||| |||||
Sbjct 2525 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 2584
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| || || ||||| |||| |||||||||
Sbjct 2585 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617
Score = 96.9 bits (106), Expect = 8e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966
|||||| ||||||||||||||||| || | | || | |||||||||| || ||
Sbjct 1961 AGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCTTCTAATTGCTTGCC 2020
Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026
|| || ||||| | || || |||| | || ||||| || ||||| ||||| |||
Sbjct 2021 CGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTT 2080
Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086
||| | || | |||| ||| || ||||| | |||||| ||||| || ||||| ||
Sbjct 2081 CACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTGT 2140
Query 152087 CTTCACGAAGACCTGCAT 152104
|| || |||| |||||
Sbjct 2141 TTTAACAAAGATTTGCAT 2158
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || |||||||| |||||||| |||||||||||||| || | | || | ||||||
Sbjct 1719 AGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGACCATCT 1778
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || || || |||||||| | |||||| || | | ||| || || || |||
Sbjct 1779 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 1838
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| ||||| ||| ||| | || | | || || || ||||| || ||||| ||
Sbjct 1839 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGTC 1898
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || || | ||||||
Sbjct 1899 TTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 89.7 bits (98), Expect = 1e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| | |||||| |||||||||||||| || || | | ||| | |||||
Sbjct 579 AGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCC 638
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|||| ||| || || ||||| || | ||| ||||| | | || || ||||| |||
Sbjct 639 TCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 698
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| | || | |||| || ||| || || | ||| || ||
Sbjct 699 TGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTC 758
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||| || |||| ||||||
Sbjct 759 TTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790
>seq41046
Length=7774
Score = 105 bits (116), Expect = 2e-17
Identities = 156/220 (71%), Gaps = 1/220 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| || |||||||| | || || || ||||| |||||||| || | || || |
Sbjct 7164 AGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGT 7223
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||||||||| ||| || || ||||| | | |||||||| | | || ||||||
Sbjct 7224 CCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCC 7283
Query 152007 TTTTCTTGAATTTT-TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
|| ||||| ||||| ||| ||| | |||| | || || ||| || || || ||
Sbjct 7284 TTATCTTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGT 7343
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||| ||||| ||||| || ||||| ||||| | ||||||
Sbjct 7344 AATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 7383
>seq27512
Length=242
Score = 104 bits (114), Expect = 5e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| | |||||| ||||| || || ||||| || | || || | |||||
Sbjct 16 AGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCC 75
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || || || |||||||| || ||||| | | || |||||||| |
Sbjct 76 TCAAGCTGCTTT--CCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTAT 133
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
||||||||||| || ||| | || | |||| || ||| ||||| || || ||||
Sbjct 134 CTTGAATTTTTGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAG 193
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| ||||| || || ||||| || || | ||||||
Sbjct 194 TCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 228
>seq27511
Length=800
Score = 104 bits (114), Expect = 5e-17
Identities = 149/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| || || || || || ||||| | || || | |||||||| |
Sbjct 423 CAAG-TGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCATCTTCCA 365
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || || || ||||||||||| ||||| | | || ||||| || |||||||
Sbjct 364 GCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCTTGAA 305
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| || ||| | |||| | || ||| || ||||| | ||| ||||||||||
Sbjct 304 TCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTGC 245
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || || ||||| || || | ||||||
Sbjct 244 CAGTCAGTGTCTTTACAAAAATTTGCATT 216
Score = 102 bits (112), Expect = 2e-16
Identities = 145/202 (72%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || | |||||| ||||| || ||||||||||| | || || | ||||||
Sbjct 200 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 141
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || || || ||||| || ||||| || | | ||||| || || |
Sbjct 140 TCAAGCTGCTTT--CCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTAT 83
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| ||||||||| ||| ||| | || | | || ||| ||| ||||| | ||| ||||
Sbjct 82 CCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAG 23
Query 152071 TTTTGCCCGTGAGAGTCTTCAC 152092
| ||||| || || ||||| ||
Sbjct 22 TCTTGCCAGTCAGTGTCTTTAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1149724590850693
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