Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq28654 109 1e-18 seq41046 105 2e-17 seq27512 104 5e-17 seq27511 104 5e-17 >seq28654 Length=3315 Score = 109 bits (120), Expect = 1e-18 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || |||||||| ||||| ||||| || | | || | Sbjct 1028 GAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCG 1087 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| || ||||||||||| | || || || | | |||||||| Sbjct 1088 GCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTC 1147 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||| ||| | || | | ||||||| ||| ||||| | ||| Sbjct 1148 CTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGT 1207 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || || || || || || || | |||||| Sbjct 1208 TATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 1247 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| ||||||||||||||||||||||| || | | || | |||||| Sbjct 1491 AGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 1550 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || || || |||||||| | || || || | | || || || || ||| Sbjct 1551 TCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCT 1610 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | |||| || ||| || || ||||| ||||| Sbjct 1611 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTC 1670 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || || | ||||| Sbjct 1671 TTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702 Score = 104 bits (114), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || ||||| || ||||| || || ||||| | ||| || | |||||||| || Sbjct 2183 ATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAGTTG 2242 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || ||||||||||| || || | | || || || || ||||| || || Sbjct 2243 TTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 2302 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | || ||| | || | |||| || |||||| || | ||| || ||||| || || Sbjct 2303 TGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATGGTTTTTCCTGT 2362 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 |||||||| || |||| ||||||| Sbjct 2363 AAGAGTCTTAACAAAGATCTGCATT 2387 Score = 100 bits (110), Expect = 7e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| |||||||| || || || || | | ||| | || ||||| | Sbjct 2408 CAAG-TGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCA 2466 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || ||||| || | | || || || | | || |||||||| ||||| Sbjct 2467 ATTGCTTT--CCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 2524 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | | || ||| || ||||| | |||||| ||||| Sbjct 2525 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 2584 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || ||||| |||| ||||||||| Sbjct 2585 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617 Score = 96.9 bits (106), Expect = 8e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| ||||||||||||||||| || | | || | |||||||||| || || Sbjct 1961 AGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCTTCTAATTGCTTGCC 2020 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || ||||| | || || |||| | || ||||| || ||||| ||||| ||| Sbjct 2021 CGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTT 2080 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | |||| ||| || ||||| | |||||| ||||| || ||||| || Sbjct 2081 CACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTGT 2140 Query 152087 CTTCACGAAGACCTGCAT 152104 || || |||| ||||| Sbjct 2141 TTTAACAAAGATTTGCAT 2158 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| |||||||| |||||||||||||| || | | || | |||||| Sbjct 1719 AGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGACCATCT 1778 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || |||||||| | |||||| || | | ||| || || || ||| Sbjct 1779 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 1838 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||| ||| | || | | || || || ||||| || ||||| || Sbjct 1839 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGTC 1898 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || || || | |||||| Sbjct 1899 TTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| |||||||||||||| || || | | ||| | ||||| Sbjct 579 AGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCC 638 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || || ||||| || | ||| ||||| | | || || ||||| ||| Sbjct 639 TCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 698 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | |||| || ||| || || | ||| || || Sbjct 699 TGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTC 758 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| || |||| |||||| Sbjct 759 TTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790 >seq41046 Length=7774 Score = 105 bits (116), Expect = 2e-17 Identities = 156/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| | || || || ||||| |||||||| || | || || | Sbjct 7164 AGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGT 7223 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||||||||| ||| || || ||||| | | |||||||| | | || |||||| Sbjct 7224 CCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCC 7283 Query 152007 TTTTCTTGAATTTT-TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||| ||||| ||| ||| | |||| | || || ||| || || || || Sbjct 7284 TTATCTTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGT 7343 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| ||||| ||||| || ||||| ||||| | |||||| Sbjct 7344 AATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 7383 >seq27512 Length=242 Score = 104 bits (114), Expect = 5e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| ||||| || || ||||| || | || || | ||||| Sbjct 16 AGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCC 75 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || || |||||||| || ||||| | | || |||||||| | Sbjct 76 TCAAGCTGCTTT--CCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTAT 133 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 ||||||||||| || ||| | || | |||| || ||| ||||| || || |||| Sbjct 134 CTTGAATTTTTGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAG 193 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| || || ||||| || || | |||||| Sbjct 194 TCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 228 >seq27511 Length=800 Score = 104 bits (114), Expect = 5e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| || || || || || ||||| | || || | |||||||| | Sbjct 423 CAAG-TGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCATCTTCCA 365 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || || ||||||||||| ||||| | | || ||||| || ||||||| Sbjct 364 GCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCTTGAA 305 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | |||| | || ||| || ||||| | ||| |||||||||| Sbjct 304 TCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTGC 245 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || ||||| || || | |||||| Sbjct 244 CAGTCAGTGTCTTTACAAAAATTTGCATT 216 Score = 102 bits (112), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || | |||||| ||||| || ||||||||||| | || || | |||||| Sbjct 200 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 141 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || || ||||| || ||||| || | | ||||| || || | Sbjct 140 TCAAGCTGCTTT--CCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTAT 83 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||||||| ||| ||| | || | | || ||| ||| ||||| | ||| |||| Sbjct 82 CCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAG 23 Query 152071 TTTTGCCCGTGAGAGTCTTCAC 152092 | ||||| || || ||||| || Sbjct 22 TCTTGCCAGTCAGTGTCTTTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149724590850693