Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq36828 93.3 5e-14 seq222154 86.0 7e-12 seq48259 86.0 7e-12 >seq36828 Length=6619 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918 |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 4121 GGGGCCTTAGCTCAATTGGTAGAGCGCCTGCTTTGCAAGCAGGAGGTCAGGGGTTCGATT 4062 Query 17919 CCGCTATTCTCCATTC 17934 || ||| ||||| || Sbjct 4061 CCCCTAGGCTCCACTC 4046 >seq222154 Length=451 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 17859 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 17917 ||||||||||||||| ||| |||||||||||| ||||| |||||| |||| ||||||| Sbjct 64 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 123 Query 17918 TCCGCTATTCTCCA 17931 ||| ||||||||| Sbjct 124 TCCCTTATTCTCCA 137 >seq48259 Length=964 Score = 86.0 bits (94), Expect = 7e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 157504 TGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGTCCTTGCGACGTGGAGGTTCA 157563 |||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct 101 TGGCGGAATTGGCAGACGCGCTGGATTTAGGTTCCAGTGTCCGACGGACGTGGGGGTTCA 42 Query 157564 AGTCC 157568 ||||| Sbjct 41 AGTCC 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594241867651280