Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq28654 197 3e-45 seq41046 181 2e-40 seq76306 140 7e-28 seq27511 132 1e-25 seq21024 109 1e-18 seq185851 105 1e-17 seq244739 95.1 3e-14 seq259364 89.7 1e-12 >seq28654 Length=3315 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || |||||||| | ||| || || ||||||||||||||| ||||| | Sbjct 564 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 623 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||||| ||||| || |||||||| | ||| |||||||| ||| Sbjct 624 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 683 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| || || || | ||||||||||| || | || || Sbjct 684 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACC 743 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | ||||||||| || |||||||| Sbjct 744 TCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || ||||| | ||| | || |||||||||||||||||||||| Sbjct 1475 ACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGA 1534 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| ||||| || || || |||||||| | ||||||||| || || Sbjct 1535 CAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGG 1594 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| || ||||| ||||| || ||||| | || || ||||| || | || || Sbjct 1595 AATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 1654 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| || || | ||||| || ||||| ||||| Sbjct 1655 CTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702 Score = 163 bits (180), Expect = 6e-35 Identities = 177/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | ||||| || | || ||||||||| || || ||||||| | Sbjct 2388 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 2447 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || || || | ||| || || || || |||||||||||||| || ||| Sbjct 2448 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 2507 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| || || |||||||| | || ||||| || |||| ||| ||| Sbjct 2508 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 2567 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATAT 283107 || | ||| || || |||||||| | || || || || ||||||||||| |||| Sbjct 2568 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGATAT 2622 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || ||||| ||||| | || || ||||||||||||||||||| Sbjct 1703 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 1762 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || | ||| || || |||||||| | ||| || || ||| || Sbjct 1763 GAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 1822 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||| ||||||||||| || |||||||| | || ||||| || || | ||| || Sbjct 1823 GATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 1882 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| || || | || ||||| || |||||||| Sbjct 1883 TTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | | |||||||| | || || || ||||||||||||||||||||||| Sbjct 1931 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 1990 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| |||| ||| || || ||||| || | ||||||||| || || Sbjct 1991 CAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGG 2050 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||||||||| || ||||| || | || || ||||| |||||||| || Sbjct 2051 AATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAAC 2110 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || || | || ||||| || || ||||| Sbjct 2111 TTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || | ||| | ||||| || ||| ||||| || || || |||| Sbjct 2159 ACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGA 2218 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || |||||||| || ||||| || | | ||||| || || Sbjct 2219 TAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGG 2278 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| ||||||||||||||||| || || | ||||||||||| || | || || Sbjct 2279 AATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTAC 2338 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | |||||| || || || || | ||||||||| || ||||||||| Sbjct 2339 CTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 2387 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || | || | ||||| || || ||| ||||| || || || ||||||| Sbjct 791 ACCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGA 850 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || || || | ||||||||| || || Sbjct 851 GAGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 910 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| |||||||||||||| ||||| || | || |||||||| || | ||| || Sbjct 911 AATACCCTCTTTGTCTTGGATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 970 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| || || || |||| ||||| || || |||||||| Sbjct 971 TTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 1018 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || ||||||| || | || ||||| ||||| |||||||||| Sbjct 1019 ACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGA 1078 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || |||||||| || || ||||| | ||||||||| || || Sbjct 1079 CAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGG 1138 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| ||||| ||||| ||||| || | || || ||||| || | || || Sbjct 1139 AATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAAC 1198 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| | ||| || || || || || | || || || ||||| |||||| Sbjct 1199 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 1247 >seq41046 Length=7774 Score = 181 bits (200), Expect = 2e-40 Identities = 179/230 (78%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || ||||| || ||||| || ||| ||| ||||| ||||||||||||| Sbjct 7154 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 7213 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| ||||||||||| || ||||||||||||||||| ||||| || Sbjct 7214 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 7273 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| ||||| |||||||| || |||||| || | || ||||| || || || || | Sbjct 7274 AATACCTTCCTTATCTTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCTCCA 7333 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | ||||| || || || |||||||| | ||||| ||||| || |||||| Sbjct 7334 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 7383 >seq76306 Length=316 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||| || ||||| | | ||||| ||||| || ||||| || ||||| || Sbjct 248 TTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAA 189 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||| | |||||| || ||||| || ||||||||||| |||||||| |||||| | Sbjct 188 AATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTT 129 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||||||| ||||| | ||||| || || || || ||||| || || Sbjct 128 TTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTAC 69 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 68 GAAGATTTGCAT 57 >seq27511 Length=800 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || |||||||| || || || ||| || || || |||||||||| Sbjct 671 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 612 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || || || || || ||||| || | | ||| || || ||| Sbjct 611 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 552 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||| || || || || || || || || | || || || || |||||||| ||| Sbjct 551 ATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 492 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | |||||| ||||| || |||| ||||| || || || |||||| Sbjct 491 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 444 >seq21024 Length=8359 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| ||||| |||||||||||||| || ||||| | |||||||||||||| | ||| Sbjct 1958 GGAATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTGTCCGAGGGCTCG 1899 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| ||||||||||| | || || ||||| |||||||| Sbjct 1898 ACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATCTGCAT 1849 >seq185851 Length=438 Score = 105 bits (116), Expect = 1e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 282999 TCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGA 283058 |||||||| |||||||| || || ||| | ||||| |||||||||| || || ||||| Sbjct 438 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGG 379 Query 283059 GTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||||||||||||||| || || || || |||||||| Sbjct 378 GTGATCGTCTTACCCGTCAATGTTTTGACAAAGATCTGCAT 338 >seq244739 Length=1400 Score = 95.1 bits (104), Expect = 3e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 43975 CGGATTTGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACA 44034 ||| | | ||| || || || || ||| | ||||| ||||| |||| || || || Sbjct 288 CGGTTCTACCAGGCTTCAACCTCCGAGCTCTACGGCAAGGTCGTCGAGACGCCCCAGACC 347 Query 44035 GAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGG 44094 || | ||| ||||| || || ||| || || ||||| |||||||| || | | ||| Sbjct 348 GAGACGACGCCGTTCTACCCGCGGTCGCCGTACGGTGTCGCGAAGCTGTACGGGTTCTGG 407 Query 44095 ATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAAT 44154 || ||||| || || |||||||| || |||| || |||||| ||| |||||| Sbjct 408 ATCGTCAAAAACTACCGTGAGTCGTACGGTATGTACGCTTGTAACGGCATTCTCTTCAAT 467 Query 44155 CACGAAAGTCCCAACAGAGGTCATCAGTTCGTGACTCGTAAAATC 44199 ||||| ||||| | | |||| |||||| ||||| || ||| Sbjct 468 CACGAGAGTCCGCGCCGTGGTCGCACGTTCGTCACTCGGAAGATC 512 >seq259364 Length=501 Score = 89.7 bits (98), Expect = 1e-12 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 ||||| |||||| ||||||| || | || | || ||||||||||| || || || Sbjct 495 GAAAAAGAGTTCCTTTGCGATGCACTCCCGGTCAAGCTGATCGGCATGAACGCCGACCTT 436 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || || | || || | || || ||| Sbjct 435 ATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTTCTTGTTGCCGTCGGTAACCCGAAG 376 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||| | ||||||| |||| ||| |||||| | || || ||| || || || Sbjct 375 CACTACAACGCTCAGAACCCGTTCGATTTCATGGAGATGATCTCCCTCGCCGGAAAGACC 316 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAGGCC 230404 ||||| ||||| ||||| || ||| || |||||||| Sbjct 315 AACTTTTTCGAGAAGCGCGTTTCCGACTACGCAAAGGCC 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1043023144016282