Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 181 8e-41
seq28654 109 4e-19
seq41046 100 2e-16
seq76306 91.5 1e-13
>seq10526
Length=5062
Score = 181 bits (200), Expect = 8e-41
Identities = 773/1210 (64%), Gaps = 45/1210 (4%)
Strand=Plus/Plus
Query 5735 TGTTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCC 5793
||||||| | |||| || ||||||| || | | ||| || || || ||||| | ||||
Sbjct 2929 TGTTACCGAGACCCATG-TTCATGGCATTCAGTAGGTCACCATTATCAGCGTCCACTTCC 2987
Query 5794 CATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGAC 5853
|| |||| ||||| || ||| || | | |||||||| ||||| | | || ||
Sbjct 2988 CAAGCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACAGAT 3047
Query 5854 CTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGC 5907
|| | | || ||||| || ||||| | |||| |||| | || ||||| |||||
Sbjct 3048 CTAGCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAAACATAGGGGGCTTGG 3107
Query 5908 GCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTT 5954
|| || |||||||| | | ||| | || | |||| || || |
Sbjct 3108 GCGACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCT 3166
Query 5955 GTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAA 6014
|||||| || || |||| || ||| | || || || || || || || ||||||||||
Sbjct 3167 GTAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 3226
Query 6015 GGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACG 6072
|||| |||||| | || || || | ||| ||| || | || ||||| || ||
Sbjct 3227 GGGAATGTTGTCTTCGTAATCATGA--ACGCCAGTCCAGCCACGACCATACATAGCAACA 3284
Query 6073 CCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCG 6132
|| || || | || || || ||||| | ||| |||| | || || | || |
Sbjct 3285 CCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCAAAGTCA 3344
Query 6133 GTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGA 6192
| ||||| |||| |||| ||||| | |||||||||| ||||| || |||| |||
Sbjct 3345 GATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGA 3404
Query 6193 TCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATAC 6252
|| ||||||||||||||||| ||||| |||| | |||||||||||||| |||
Sbjct 3405 GTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAA 3464
Query 6253 TCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTT 6312
| || || ||| || || ||||| | ||||| || | || |||| || ||
Sbjct 3465 TTTTGAGCCTTACCATAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 3524
Query 6313 GTGAGCAGATACTTGCGACCCGTGCGAGTCTCCAGACCGTCCAGCATGGACCTGAGGTCG 6372
|| | || || ||| | || || | || ||||| | | ||
Sbjct 3525 GTTAATTCGTATTTCTTACCATTCTTAGCAGAGAGCTCATCGAGCATCTCACGTAATTCT 3584
Query 6373 CCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGATTGGCT 6432
|| | | ||| | || || ||| | | || | | |||| || ||
Sbjct 3585 TTCATCAAACTTACATAACAATCACCATCTTCTG---GGCTACCGAGGTCAGGGTTAGCA 3641
Query 6433 CCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAGTTTCC 6492
|| ||||| || || || |||||||| || || || || |||||||| ||||| |||
Sbjct 3642 CCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGA 3701
Query 6493 AGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCTGGTAA 6552
||||| || | || || || || |||| ||| |||| | | |
Sbjct 3702 AGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAG 3761
Query 6553 AAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGAT----GCGGATT 6608
|| |||||| |||||||||||||| || ||||| || || ||| | |||| |
Sbjct 3762 AAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCT 3821
Query 6609 GTGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA----CATTTCCGAGTAGG 6664
|||||| || | ||| | || || || || || ||||| |||| | ||
Sbjct 3822 -TGTTTTAGT---GACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGA 3877
Query 6665 CCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTTGA 6724
| | || || || |||||||||| ||| ||||| |||||| || || || ||||
Sbjct 3878 C----AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGA 3933
Query 6725 AGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTTCA 6784
|||| || || || || |||||||| || |||| ||| ||| | || ||| |
Sbjct 3934 AGTCCTCACGGCCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTA 3993
Query 6785 GAGCGTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGTGA 6844
| || || || || || || ||||| || || | || ||||| |||| ||| || |
Sbjct 3994 AACTATCATTAATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAA 4053
Query 6845 GATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCCACGA 6904
|||| || || || || | || |||| || | || || |||||||| || ||||
Sbjct 4054 GATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGA 4113
Query 6905 AGTAAGCTCC 6914
|||| || ||
Sbjct 4114 AGTAGGCACC 4123
>seq28654
Length=3315
Score = 109 bits (120), Expect = 4e-19
Identities = 167/237 (70%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || |||| ||| | || || | ||||| || ||| |||||||||||
Sbjct 1466 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTT 1525
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || | || ||| | || || |||||||| || |||||||| | ||| || ||
Sbjct 1526 GTAGTCAGACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTG 1585
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280
||||| || | ||| || || || ||||| ||| | || | |||||||| |
Sbjct 1586 ATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 1645
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||||||||| || || ||||| || || || ||||| || || ||||||||
Sbjct 1646 TGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702
Score = 109 bits (120), Expect = 4e-19
Identities = 167/237 (70%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || |||| ||| | || || || ||||| || |||||||||||||||
Sbjct 1694 TATTTGCATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTT 1753
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || | ||| ||| | || |||| ||||| || |||||||| | |||||||||
Sbjct 1754 GTAGTCAGAGAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTG 1813
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280
||| | || | || || || || || || || | || | || || || |
Sbjct 1814 ATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGA 1873
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||| |||| ||||| |||||||| || ||||| || || || || |||||
Sbjct 1874 GGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| ||||||||||| || || | || ||| | || || | ||| || || ||||||
Sbjct 600 TCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAG 659
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|| | |||||| || |||| || | || ||||| || ||||| ||| | ||
Sbjct 660 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 719
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
| || ||||||| | |||||||||| || || ||||| || || || ||||| ||
Sbjct 720 TCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACA 779
Query 44327 AAGATTTGCAT 44337
||||| |||||
Sbjct 780 AAGATCTGCAT 790
>seq41046
Length=7774
Score = 100 bits (110), Expect = 2e-16
Identities = 143/199 (72%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|||||||| |||||||| || | | | || | || || || || || || ||||||
Sbjct 7191 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 7250
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGT 44265
|||||||| ||||| |||| || | ||||||||| || || || || || |
Sbjct 7251 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTAACATT 7310
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||| || || | || |||||||| | ||||| || || ||||| |||||||| ||
Sbjct 7311 TTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 7370
Query 44326 GAAGATTTGCATGATGTGA 44344
||| |||||||| |||||
Sbjct 7371 GAAAATTTGCAT--TGTGA 7387
>seq76306
Length=316
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || || || | ||| || | ||| | || ||||| ||||| || ||
Sbjct 290 TTGCATTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATA 231
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | | | |||| | || ||||| ||||| ||||| || |||| | || |||||
Sbjct 230 GTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATC 171
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| ||| | |||||||| || ||||| ||| | || | || || || | |
Sbjct 170 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGC 111
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|||||| |||| || || || || || || | || || ||||||||||||||||||
Sbjct 110 TTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATG 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 358774730756211
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |