Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq27008 208 6e-49
seq9095 100 2e-16
seq89413 98.7 8e-16
seq21475 96.9 3e-15
seq52194 95.1 1e-14
seq16356 93.3 4e-14
>seq27008
Length=12848
Score = 208 bits (230), Expect = 6e-49
Identities = 358/527 (68%), Gaps = 66/527 (13%)
Strand=Plus/Plus
Query 29024 CACGCCTCAGTCATCACCCGCTGCACAAAGTCGCGGCCCTTGACGAGCAGCACGTACTCG 29083
|||||||| || |||||| ||| || | || ||||| ||||| ||| ||||||| ||
Sbjct 4247 CACGCCTCCGTGATCACCTTCTGGACGTACTCTCGGCCTTTGACCAGCTGCACGTAGGCG 4306
Query 29084 CAGCGGTCGTACCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTC 29143
|| |||||| ||||||| ||||| |||| ||||||| |||||||| ||||| |||||
Sbjct 4307 CACCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCTTG 4366
Query 29144 AGACCGCCGTCGCAGCAAAAGCACCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCG 29203
|| |||||||| ||| | |||||| || ||||| |||||||| ||||| ||||||||
Sbjct 4367 AGCCCGCCGTCACAGTAGAAGCACTTAGTTTTGTCACCCTGGCCGGTGTAGAAGAATCCC 4426
Query 29204 GCCTCGGCCAACTCTTCGGGCCGCTGTTTCAACCCGCGGGGCCACTCCGCAAAGGTGCGC 29263
|| ||||| | || || ||| ||| |||| | ||| ||||| || ||| |||||
Sbjct 4427 GCTTCGGCGAGTTCCTCAGGCTTCTGCTTCATACTGCGAGGCCAGTCGCTGAAGCTGCGC 4486
Query 29264 AAACGCGCGGCTTCCGTGGCATACTGCGGGTGCGCG--GCCGC----------CGACCGC 29311
| || || || || | ||| || ||| |||| || |||| || | ||
Sbjct 4487 AGGCGGGCCGCCTCGGAGGCGTAGCGCGAGTGCACGGGGCCGGGCATGCGGGGCGCCAGC 4546
Query 29312 GCCGGCGGGG---CGCG------------GTCGTGT------------------GGCGTG 29338
|| ||||||| |||| |||||| |||| |
Sbjct 4547 GCGGGCGGGGGCGCGCGCACCCCGCACTCGTCGTGGCCAGCGGGCGCGAGCGAGGGCGCG 4606
Query 29339 ---TCGTGCG---CGTTGT-----------TGC----GCACAAACGGACACTGCGGCGCC 29377
||| ||| ||||| ||| ||| || || ||||| ||||||
Sbjct 4607 GGCTCGCGCGGCACGTTGCCAGATTCCGCCTGCCGCCGCAGGAAGGGGCACTGGGGCGCC 4666
Query 29378 CACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTTACCCAATTCGTAATCTCTACCTTG 29437
|| |||| ||||||| | | || ||||||||| ||||| ||| |||| ||||| ||
Sbjct 4667 CAGCGCTGGTGGTCCTTGGCGGGATCGTCGCCCGCAACCCATTTCATAATTTCTACTTTA 4726
Query 29438 CAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAGTAGTAGAACCC 29484
|||||||||||||| || || ||||||||||||| || ||||| ||
Sbjct 4727 CAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGATAATAGAAGCC 4773
>seq9095
Length=14658
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| ||||| || |||| ||||||||| || ||||| ||||| || ||||| |
Sbjct 5980 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6039
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || || ||||| || || ||| |||||||||| || || || ||
Sbjct 6040 ATAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 6099
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| || || || ||| || || || | | | |||||| | |||
Sbjct 6100 GAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 6159
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| || || || ||||| || | ||||| |||||||||||||||
Sbjct 6160 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 6209
Score = 100 bits (110), Expect = 2e-16
Identities = 165/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | | ||||| |||||||| |||||||| || || |||||||| |
Sbjct 6436 TTCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 6495
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || || || || || || || |||| ||||| || || || |
Sbjct 6496 ACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 6555
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | |||||||||||| |||||| || || | ||| |||||| | |||
Sbjct 6556 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 6615
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCT 21184
||||| || ||||| || || ||||| ||||| || || |||||||| |||||||
Sbjct 6616 CTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATGAATCT 6673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| |||| || || | |||||||| || ||||||||||| |||||||| | |
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | || || ||||||||||| || |||| || ||||| ||||| ||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| || || || || | | | |||||| | ||| |
Sbjct 5418 ATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 5477
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| || || || || || || | || || ||||| |||||||||
Sbjct 5478 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | || || | ||| ||||| || ||||| ||||| || ||||| | |
Sbjct 5754 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 5813
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | || || ||||| || || ||| ||||||| || || ||||| ||
Sbjct 5814 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 5873
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || || || || || | ||| || ||| |||||| |
Sbjct 5874 ATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACT 5933
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| || || || ||||| || | || || |||||||||||||||
Sbjct 5934 TCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 5981
>seq89413
Length=986
Score = 98.7 bits (108), Expect = 8e-16
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 102776 GGCTCGTTCCATGCGGATACGCCCTTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGG 102835
||||||||||||| || | || ||||| || ||||||| || ||||| || ||||||
Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927
Query 102836 ATAGCGACCTTAAAGTCTGCGCGGCCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCCG 102895
|| | ||| || ||||| | ||||| | || || ||||| || |||| ||||||||
Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867
Query 102896 GGAATGGTCTTGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTAC 102955
|| || | || || | ||||| ||||||||||| || || ||||||||
Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807
Query 102956 AGCA 102959
||||
Sbjct 806 AGCA 803
>seq21475
Length=13715
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| || || || || | ||||| | |||||| ||||| |||||||||||||| |||||
Sbjct 11126 GTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTC 11067
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || || | | || || || ||||| || ||| | || | | ||||||||
Sbjct 11066 AGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGG 11007
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
|| | |||||||| || ||| || ||| || | | | ||||||| || |||
Sbjct 11006 TGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTC 10947
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
| || | ||||||||| || || || | || ||||| || ||||||||| |||
Sbjct 10946 CACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGA 10891
>seq52194
Length=4646
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | || || | ||| | || ||||||||||| ||||| |||||||
Sbjct 4351 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 4410
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | | || |||||||||||||| ||| | ||||| | || || || |||
Sbjct 4411 AAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 4470
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || || || || ||||| || || | | | || ||| ||||| |
Sbjct 4471 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTACT 4530
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || |||||||| |||| || |||||||||||||||||
Sbjct 4531 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577
>seq16356
Length=5361
Score = 93.3 bits (102), Expect = 4e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788
|||||||| |||||||||||| ||||| | |||| | | ||||||| |||||||||
Sbjct 293 GGCGGCGTAGGGCTGAACCTGTGCGGCGCGAGCCACCTGCTGCTGCTGGACCCGCACTGG 234
Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAG 38839
|||||||| | ||| |||||| || |||||| | ||||| |||| |||
Sbjct 233 AACCCGCAGCTGGAGGAGCAGGCACAGGACCGCGTGTACCGCGTGGGGCAG 183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421466883261644
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