Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 113 5e-20
seq52194 109 6e-19
seq7375 104 2e-17
seq21475 93.3 4e-14
seq89413 91.5 2e-13
seq133270 87.8 2e-12
>seq9095
Length=14658
Score = 113 bits (124), Expect = 5e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| || || |||||||| || ||| | || || ||||| |
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | || | ||| |||| |||||||| ||||| || | || ||
Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 4949
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| |||| || | || || || || ||||| || | |||||| | ||||| ||
Sbjct 4948 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 4889
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || ||||| ||||||||||
Sbjct 4888 ATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCG 4854
Score = 113 bits (124), Expect = 5e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| || || |||||||| || ||| | || || ||||| |
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | || | ||| |||| |||||||| ||||| || | || ||
Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 5633
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| |||| || | ||| || || || ||||| || | |||||| | ||||| ||
Sbjct 5632 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 5573
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || ||||| |||| |||||
Sbjct 5572 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCG 5538
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||||||||| |||||||| || || |||||||| ||||| | || || ||||| |
Sbjct 6209 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6150
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| | |||| ||||| | || ||||||||||| ||| | || ||
Sbjct 6149 TGATACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCA 6090
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| || | || || || ||||| || || | ||||| || ||||||||
Sbjct 6089 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAA 6030
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| | || ||||||| || | || |||| || ||
Sbjct 6029 TATTCAGAAGGAATCTACTTTGCATCTGGTACTACGGCTGAGAGGTGG 5982
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||||||||| | || || ||||||||||| | || || ||||| |
Sbjct 6664 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 6605
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | ||||| | |||| ||| |||| ||||| || ||||| || | || ||
Sbjct 6604 GATACAATCGAAAACG-TAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 6546
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| || | ||| || || || || || || | |||||| | ||||| ||
Sbjct 6545 ACAAAGACTGATTTTCGCCGGAAAGCAACTCGAAGATGGGCGCACATTGTCAGACTATAA 6486
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || |||| | ||||||||
Sbjct 6485 TATCCAGAAGGAGTCTACTTTGCACTTGGTGTTGCG 6450
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || ||||||||||| || || ||||| || || | || || || | |
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | || | |||||||| || || ||||| || ||| | |||||
Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 5177
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | ||| || ||||| || || || | ||||| || |||||||||
Sbjct 5176 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTATCAGACTACAAC 5117
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| | || | ||| |||| | || |||| || ||
Sbjct 5116 ATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 5070
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||||||||| ||||| || || || |||||||| ||||| | || || || || |
Sbjct 5981 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACACTGGAAGTTGAGCCCTC 5922
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| ||||||| || || || || || || | |||||
Sbjct 5921 TGACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 5862
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || || | || || || ||||| || || | ||||| || ||||||||
Sbjct 5861 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTGTCTGACTACAA 5802
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| |||||||| | || | ||| |||| | || |||| || ||
Sbjct 5801 TATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 5754
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || ||||| || || || || ||||| ||||| | || || ||||| |
Sbjct 5525 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 5466
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| | |||| ||||||| ||||| || || || || | |||||
Sbjct 5465 TGATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 5406
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | || || | ||| ||||||||||| || || | ||||| || ||||| ||
Sbjct 5405 ACAGAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 5346
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|| || ||||| | || |||| |||| ||||
Sbjct 5345 TATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCG 5310
>seq52194
Length=4646
Score = 109 bits (120), Expect = 6e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || || || || || ||||| || || || | || || || | |
Sbjct 4577 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGAGCCGTCT 4518
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | ||| | |||| || |||| || |||||||| || ||| | || ||
Sbjct 4517 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 4458
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || |||| || |||||||||||||| || | || ||| | |||||||||
Sbjct 4457 CAACGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAAC 4398
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| |||||| | || || ||| |||| ||||
Sbjct 4397 ATCCAAAAGGAGTCTACCCTTCATTTAGTACTGCG 4363
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || ||||| || ||||| || ||||| ||||| | || || ||| || |
Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | || | || || | ||||||||||| || ||| | || ||
Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGATCAA 3769
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||| | ||| ||||| |||||||| || | || || ||| ||||||||
Sbjct 3768 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 3709
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||| ||| |||| ||||
Sbjct 3708 ATTCAGAAAGAGTCCACTTTGCA 3686
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747
|||||||||||| || ||||| || || || ||||| || || | || || | |||||
Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAG-AGCCAT 4059
Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||||| | | ||| | || | || |||| || || || || || || | || |
Sbjct 4058 CCGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATC 3999
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| ||||| || |||| ||| || || || ||||| || | |||||||| |||||||
Sbjct 3998 AACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACA 3939
Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892
| |||||||| ||| |||| || ||
Sbjct 3938 ATATCCAGAAAGAGTCCACCCTTCA 3914
>seq7375
Length=9560
Score = 104 bits (114), Expect = 2e-17
Identities = 159/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004
|| || || || || || || | || || || || ||||||| || |||||| | |
Sbjct 4637 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 4696
Query 117005 TGGATCGCCGGCAGAGA-GGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063
||||||| | ||| ||| ||| | || || || || | | || || || || || ||
Sbjct 4697 TGGATCGGCAGCA-AGACGGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCGGTTGA 4755
Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123
||| | || || || ||||| || || | ||||||||| | || ||||| || || ||
Sbjct 4756 GGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGAT 4815
Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|||||| ||||||||||||| || || || || ||||| ||||
Sbjct 4816 GCCCGGATTGACTTTCAGCAATGAACTTATTTCTAGGGATGAGG 4859
>seq21475
Length=13715
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || || ||||| |||||||| ||| |||| || || ||| |
Sbjct 10895 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 10954
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| | || | ||||| | || || || || || || | |||||
Sbjct 10955 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 11014
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| | |||| || || ||||| || || || | || || | ||||||||
Sbjct 11015 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 11074
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||| || ||||| |||| ||||||| |||
Sbjct 11075 CATTCAAAAGGAATCCACATTGCATCTTGTG 11105
>seq89413
Length=986
Score = 91.5 bits (100), Expect = 2e-13
Identities = 185/275 (67%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 65759 GGCTCGCTCCACGCGGTCACGCCCTTTTGCGGCTTCTGCACGGCCGCCCACGGGTCGTGC 65818
|||||| |||| | | || || ||||| || || || | || ||||| || |||||
Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927
Query 65819 ACCGCCAGCTTGAAGTCGTCGCGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCC 65878
| | | |||||||| || ||||| || || ||||| || || | ||| |||||
Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867
Query 65879 GCGATGGACTTGAGGCTGTCGTTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTAC 65938
|||| || | || || ||||||||||| |||||||| || || | ||||||||
Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807
Query 65939 AGCAGATGCGTGAGGTTGGGCACGGGCACCTTGTCGGCGGGAAAGTCGCGCCCGTACACG 65998
|||| || || || || || | || | || |||| || | | || ||
Sbjct 806 AGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACA 747
Query 65999 CCCCACTCGACGAAGTAGGCGGCCACCACCTTGCC 66033
||||| || ||||||||||| |||| || || ||
Sbjct 746 CCCCATTCTACGAAGTAGGCACCCACAACTTTTCC 712
>seq133270
Length=334
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || || || ||||| ||| | || || ||| || |
Sbjct 183 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 124
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | ||| | || | ||||||| ||||||||||||||||| | || |||
Sbjct 123 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGCATCCCTCCTGATCAG 64
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || || || || |||| || | |||||||| |||||||||
Sbjct 63 CAGCGTCTTATCTTTGCCGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 4
Query 40870 ATC 40872
|||
Sbjct 3 ATC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514227667089840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |