Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq58853 107 4e-18 seq59635 95.1 2e-14 >seq58853 Length=1972 Score = 107 bits (118), Expect = 4e-18 Identities = 160/218 (73%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGA-TACAAACAAACCACT 135785 |||||||| || |||||| |||| | || || |||| ||||| | | | || ||||| Sbjct 1422 GGTATATGTGACAATTTATTGACATGTACAGTGCGAGCGTGGGACTTCTCA-AAGCCACT 1480 Query 135786 CATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATAT 135845 | ||||||||||||||||| ||| ||||||||||||||||||||| ||||| || Sbjct 1481 TGTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAAT 1540 Query 135846 AGATACGTTAAAATATATGGG-TTTCATAGAAATAGAATGCATAGaaaaaaaaC--TAGC 135902 |||| ||||| || ||| ||||| |||||| | || | || ||||| || Sbjct 1541 AGATGTTTTAAAGGATTGGGGCTTTCA-AGAAAT-TCCTCCA-ATAAGTAAAACTTTAAT 1597 Query 135903 ATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTTG 135940 |||||||| ||| ||||| |||||||||| ||| Sbjct 1598 GTGTGGAGATACAGGCGTTGGTGGTATGGCAGAAATTG 1635 >seq59635 Length=4213 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 188849 GTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAATACGGTGCA 188908 ||||| ||||| ||| | || || ||||||| || ||||||||| | ||||| ||| Sbjct 1573 GTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCCTCTGATAAACAGGAATATTCAGCA 1514 Query 188909 CGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAATTTCCTGTT 188968 |||| ||||||| || || | ||||||| |||||||| | |||||||||||| Sbjct 1513 AGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTTACAGAATTTCCTCCA 1454 Query 188969 GTTCGTAAACATCCATA 188985 ||| ||||||||| || Sbjct 1453 GTTATTAAACATCCTTA 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921420119298360