Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq18220 149 7e-31
seq52194 122 1e-22
seq31600 111 2e-19
seq7010 111 2e-19
seq9095 109 6e-19
seq38911 98.7 1e-15
seq21475 93.3 5e-14
seq48325 89.7 6e-13
seq134579 87.8 2e-12
seq58137 87.8 2e-12
seq147150 84.2 2e-11
seq36792 84.2 2e-11
seq100443 82.4 9e-11
>seq18220
Length=5896
Score = 149 bits (164), Expect = 7e-31
Identities = 213/300 (71%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 97126 TATTTGGATCATGTGTTTTTAATGAGTTACGACTTCAAAGGCGCATGGTCCAACACGGAT 97185
||| |||||||| | || || ||||||||||||||||| || || ||||| || |
Sbjct 5878 TATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAATGATACT 5819
Query 97186 TTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACGACAAGTACACAACT 97245
| || |||||||| ||||||||||| ||| ||||||| || | || | |||||| ||
Sbjct 5818 CTAGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTTACACATCT 5759
Query 97246 GACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGTACCTTCCAACAAAATTGTAGTTGGA 97305
|||| | |||||| | |||| ||| ||| | | || || |||||||| ||
Sbjct 5758 GACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGATTGTAGTAGGT 5699
Query 97306 GTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTACAAGAACAATAACGTATTT 97365
|| || ||||| || | || |||| |||||| || |||||||| |||| | ||
Sbjct 5698 GTTGCTATGTATGGTCGTGGCTGGACTGGTGTTCATGATTACAAAGACAACATTCCCTTC 5639
Query 97366 ACGGGCGTCGCCACAGGTCCGGTAAAAGGTACATGGGAAAACGGTGTCGTCGATTATAGG 97425
|| ||| ||| || || || || ||||| || ||| || |||| || || || || |||
Sbjct 5638 ACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGTTGACTACAGG 5579
>seq52194
Length=4646
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||||| |||||| || ||||| ||||| ||| ||| || ||||||||||| ||||
Sbjct 3662 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 3721
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || |||||||| |||||||| ||||| || || || || | ||
Sbjct 3722 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 3781
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | ||| ||||| ||| || ||| | | | | ||||| | ||| ||
Sbjct 3782 ATTCCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 3841
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||| ||||| || || || |||||||||||||| |||||
Sbjct 3842 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888
>seq31600
Length=2932
Score = 111 bits (122), Expect = 2e-19
Identities = 75/84 (89%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1533 AAAAAGTTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1474
Query 60117 TCACCACTATACTACCGAGGATTG 60140
| |||||||||||||||| |||||
Sbjct 1473 TTACCACTATACTACCGAAGATTG 1450
>seq7010
Length=9211
Score = 111 bits (122), Expect = 2e-19
Identities = 94/113 (83%), Gaps = 2/113 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 4391 AAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4332
Query 60117 TCACCACTATACTACCGAGGATTGAATATATAACTTGAATATTA-CAATCCTA 60168
| |||||||||||||||| ||| || | ||| ||||| |||| ||||| ||
Sbjct 4331 TTACCACTATACTACCGAAGATGTAACAAATATGTTGAA-ATTATCAATCTTA 4280
>seq9095
Length=14658
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||||| |||| || || ||||| || |||||||||||||| || |||| |
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || |||||||| || |||||||| || || | ||| ||||| | ||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||||| | ||| |||| | || | | | | || || | ||||||
Sbjct 5418 ATACCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 5476
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | ||||| ||||| || || || ||||||||||| |||||||||
Sbjct 5477 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||| || | || |||||||||||| ||||| || |||||| || ||||| || || |
Sbjct 6437 TCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGA 6496
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || ||| | || || || ||||| || ||||| || |||| || || || | ||
Sbjct 6497 CAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGG 6556
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| || ||||||| | ||| | |||| || | | | | || || | |||||
Sbjct 6557 AATGCCTTCCTTGT-CTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 6615
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || | ||||||||||| || |||| || ||||| |||||||||||
Sbjct 6616 CTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664
>seq38911
Length=4699
Score = 98.7 bits (108), Expect = 1e-15
Identities = 71/81 (88%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| ||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 4259 AAAAAATCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4316
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||| ||
Sbjct 4317 TGACCACTATACTACCGAAGA 4337
>seq21475
Length=13715
Score = 93.3 bits (102), Expect = 5e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
||| | |||||||||| ||||||||||| ||||| |||| || || || | || ||
Sbjct 11105 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 11046
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||| || |||||||| || || | || |||||||| | || | | ||||| ||
Sbjct 11045 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 10986
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||| | | | | || || | ||||| |||| || ||||||||
Sbjct 10985 GATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTT 10926
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
||||| || ||||| || || |||||||||
Sbjct 10925 ACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895
>seq48325
Length=5009
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130
|||| ||||||||||||| ||||||||| |||||| ||||| ||||| ||||||||||||
Sbjct 4399 CGGCGGGGAATCGAACCCCGGTCTCCCGTGTGACAAGCGGAGATACTGACCACTATACTA 4340
Query 60131 CCGAGGA 60137
|||| ||
Sbjct 4339 CCGAAGA 4333
>seq134579
Length=311
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| |||| ||||||| ||||| |||||||||||||||| |||| ||||| | ||||
Sbjct 199 TCTCCCCGGCGGGGAATCAAACCCCGGTCTCCCGCGTGACATGCGGGGATACTTATCACT 258
Query 60125 ATACTACCGAGGA 60137
||| |||||||||
Sbjct 259 ATAGTACCGAGGA 271
>seq58137
Length=8097
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
|||||| ||||| || | || || |||||||||||||| |||| || || || |
Sbjct 7748 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCC 7689
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || | ||||| |||||||| || | || || || || | || | || |||||
Sbjct 7688 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 7629
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|| | ||| |||| | ||| | | | | || ||| | ||| || || | || |
Sbjct 7628 GT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 7570
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
||||||| ||||| || || || |||||||| ||||||||
Sbjct 7569 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
>seq147150
Length=242
Score = 84.2 bits (92), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 60083 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGAA 60142
|||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 1 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGATGGTG 60
Query 60143 TATA 60146
||||
Sbjct 61 TATA 64
>seq36792
Length=1665
Score = 84.2 bits (92), Expect = 2e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 60083 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138
|||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1665 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGAT 1610
>seq100443
Length=576
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| |||| |||||| ||||| |||||||||||||||| ||| ||||| | ||||
Sbjct 283 TCTCCCCGGCGAGGAATCAAACCCCGGTCTCCCGCGTGACATCCGGGGATACTTATCACT 342
Query 60125 ATACTACCGAGGA 60137
|||||||||||||
Sbjct 343 ATACTACCGAGGA 355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570717144176520
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