Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq9562 129 9e-25
seq9095 116 5e-21
seq58137 111 2e-19
seq133270 95.1 2e-14
seq52194 84.2 3e-11
>seq9562
Length=33616
Score = 129 bits (142), Expect = 9e-25
Identities = 157/213 (74%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 10481 TAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGT 10540
||||||| | || || |||||| || || || ||||| || | ||||| | |||||
Sbjct 20257 TAAATTTTTGTAT-TTATAGCTGGTGTCATAGATGAAGACTACCGTGGAAACATTGGAGT 20315
Query 10541 AATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCA 10600
| ||||| |||||||| | |||||||||| | | || | ||| |||||||| ||||
Sbjct 20316 GGTGTTATTCAATCATTCCAGTGAAGATTTTGCAGTTAAAAAAGGTGATAGAATTGCTCA 20375
Query 10601 ATTAATATGTGAAAAAATTTTATATCCTAAAATGTTAAAAGTCGATAGTTTATCAGAAAC 10660
| | |||||||||| |||||| || || | || | |||| || | | ||||||||||
Sbjct 20376 ACTGATATGTGAAAGAATTTTCTACCCGGATATAGTTGAAGTTGACAATCTATCAGAAAC 20435
Query 10661 AAAAAGATCTGATTTTGGTTTTGGATCTACTGG 10693
||||||| || ||||||||| ||||| ||
Sbjct 20436 AAAAAGAGGGGAAGGTGGTTTTGGGTCTACAGG 20468
>seq9095
Length=14658
Score = 116 bits (128), Expect = 5e-21
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | || ||||| ||| ||||||||||| || ||||| || || |
Sbjct 5980 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6039
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| ||||| | | ||| || | || |||||||||||||| | |||||| ||||| || |
Sbjct 6040 ATAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 6099
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| || |||||||| || ||||| ||| ||| |
Sbjct 6100 GAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 6159
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| | |||||| ||||| || || | |||||| | ||||||||||||
Sbjct 6160 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 6209
Score = 113 bits (124), Expect = 7e-20
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||||||||| | || | || | |||||||||||| |||||||| |||||
Sbjct 4614 CCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGAC 4673
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| || | | ||| || | ||| |||||||||||||||| |||||| ||||| ||||||
Sbjct 4674 AATGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGA 4733
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||||| ||| ||| |||
Sbjct 4734 ATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 4793
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|| | ||||| ||||| || || | ||| || | ||| |||||||||
Sbjct 4794 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841
Score = 111 bits (122), Expect = 2e-19
Identities = 108/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | || || ||||| |||||||| || || |||||||| ||||
Sbjct 4840 TTCCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 4899
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | || | | ||| || | ||| |||||||||||||||| |||||| ||||| ||||
Sbjct 4900 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAG 4959
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| |||||||| || ||
Sbjct 4960 GAATGCCTTCTTTGTCCTG 4978
Score = 111 bits (122), Expect = 2e-19
Identities = 108/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | || ||| | || |||||||||||||| || || ||||| |
Sbjct 6208 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 6267
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| |||| || |||||||||||||| | |||||||||||| || |
Sbjct 6268 ATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 6327
Query 146169 GAATTCCTTCTTTATCTTG 146187
||||||| |||||||| ||
Sbjct 6328 GAATTCCCTCTTTATCCTG 6346
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || | | ||| ||||||||||||||||| || ||||| || || ||
Sbjct 5754 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 5813
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| || | || |||||||||||||| | ||||| || || ||||||
Sbjct 5814 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 5873
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||||||
Sbjct 5874 ATTCCTTCCTTATCTTG 5890
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109
|||||||| || | | || || || |||||||||| |||| || |||||||| || ||
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGA-ATATTATAGTCAGA 5356
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||||| | | ||| |||| ||||| ||||| ||||||| || || || || |||||
Sbjct 5357 CAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGG 5416
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| || |||||
Sbjct 5417 AATACCTTCCTTGTCTTG 5434
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || | | ||| ||||||||||||||||| || || || || |||||
Sbjct 5070 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAT 5129
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| || | |||||||||||| ||||| | || || || || || |||
Sbjct 5130 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGA 5189
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || ||||||||
Sbjct 5190 ATCCCCTCCTTATCTTG 5206
>seq58137
Length=8097
Score = 111 bits (122), Expect = 2e-19
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||| | |||||||| || | |||||||||||| ||||| || || |
Sbjct 7761 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAG 7702
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
|||| || | | || || ||||| |||||||| |||||||| | ||| ||||| ||||
Sbjct 7701 AAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 7642
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| ||||| || ||||| |||||| ||| ||| |
Sbjct 7641 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 7582
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|||| | || || |||||||| || | |||||| | || || ||||||||
Sbjct 7581 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
Score = 86.0 bits (94), Expect = 9e-12
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|| || | ||||| ||||| ||||||| |||||||| ||| || ||||||||||| ||
Sbjct 7995 CCGCCACGAAGTCGCAATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATCAGA 7937
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATC 146163
| || | || ||| || | |||||||||||||||||||| || || |||||
Sbjct 7936 TAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATC 7883
>seq133270
Length=334
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | | | ||| || || |||||||||||||| || || || || ||
Sbjct 185 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 244
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| |||||||| || || |||||||| | | ||| ||||||||||||
Sbjct 245 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 304
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 305 ATGCCTTCTTTGTCTTG 321
>seq52194
Length=4646
Score = 84.2 bits (92), Expect = 3e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||| | | ||| ||||| || ||||||||||| || |||||||| |
Sbjct 3432 TTCCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCG 3491
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| ||||| | || ||| || || ||||| |||||||| || | | || || || || |
Sbjct 3492 ACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGG 3551
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| || || || |||||
Sbjct 3552 GAATGCCCTCCTTGTCTTG 3570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742095492737280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |