Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 104 2e-17
seq52194 102 5e-17
seq9095 82.4 5e-11
>seq58137
Length=8097
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || |||| ||| | |||| |||||| || || |||||||| ||
Sbjct 7760 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGA 7701
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || |||| ||||| ||||| || |||||||| | || || || || ||
Sbjct 7700 AAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 7641
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| || |||||||| || ||| ||||| | || | || | ||||| | ||| |
Sbjct 7640 AATGCCTTCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 7582
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || |||||||| || || || ||||||||||||||||||||
Sbjct 7581 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
>seq52194
Length=4646
Score = 102 bits (112), Expect = 5e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218
|| ||| ||||| || | || || | || || ||| |||||| || ||||| || ||
Sbjct 3430 GATTCCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATC 3489
Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278
||||| ||| | || |||||||| || || || || ||||| ||||| |||||
Sbjct 3490 CGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGG 3549
Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338
||| | || ||||||||| ||||| ||| | || | || | |||| | ||
Sbjct 3550 GGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTC 3609
Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||| |||||||| || || || ||||| || || |||||||||||
Sbjct 3610 AACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240
|||| ||| ||||| |||||||| || |||||||| || || ||| | || |||
Sbjct 3680 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCC 3739
Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300
| ||||||||| ||||||||||| || || || || ||| | | ||| |||||
Sbjct 3740 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGG 3799
Query 34301 ATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359
||| || ||||| | || | || | || | | ||| || || | ||||| |||||
Sbjct 3800 ATC-TTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTT 3858
Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||||| || || ||||||||||||||
Sbjct 3859 CCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888
>seq9095
Length=14658
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || ||||| ||| |||||| || ||||| || || ||||| ||
Sbjct 6437 TCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGA 6496
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || | || || | ||||| || |||||||| || | || || || ||
Sbjct 6497 CAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGG 6556
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| |||||| ||||| | | || | ||| | | ||| ||
Sbjct 6557 AATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCAC 6616
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||||| || || | |||||| || ||||| |||||
Sbjct 6617 TTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322465795675040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |