Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq7375 131 2e-25 >seq7375 Length=9560 Score = 131 bits (144), Expect = 2e-25 Identities = 165/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| |||||||| Sbjct 4859 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 4802 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 4801 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAA 4742 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || |||| ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 4741 AGCAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 4682 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || || |||| | | | |||||||| ||||| ||||| Sbjct 4681 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 4637 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 4030 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3971 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || || || ||||| | | ||| |||||| | || | || |||| Sbjct 3970 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 3911 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14653 || |||||||| ||||||||| ||||||||| ||||| || | | || ||||| | | Sbjct 3910 TTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGT 3851 Query 14654 TGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCT 14693 | ||| || | | | | | |||||| ||||| |||| Sbjct 3850 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 3811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481417331922120