Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4562 605 3e-168 seq7375 143 2e-29 seq52194 123 2e-23 seq9095 105 6e-18 seq58137 104 2e-17 seq21475 102 7e-17 >seq4562 Length=21325 Score = 605 bits (670), Expect = 3e-168 Identities = 1215/1785 (68%), Gaps = 32/1785 (2%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 ||||| || |||||||| || || ||||| || ||||| ||||| | || ||||| || Sbjct 21089 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 21030 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || | |||||| ||||| |||| ||||| |||||||| | ||||||||| | || Sbjct 21029 GTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGT 20970 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | | | | ||||| || ||||| || || ||||| ||||||| ||| || ||| Sbjct 20969 TTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCC 20910 Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 || | ||| |||| || || || ||||||||||| ||||||| | || || ||| Sbjct 20909 ATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCT 20850 Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405 || || ||| || || | || || || |||| ||| || | ||||| || Sbjct 20849 TTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGGTTTTTCATA 20790 Query 22406 GTATCGTTCCACAAACCGATGGCG-GTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 || | ||||||| | | || |||||||| | | |||||| ||||||| || | Sbjct 20789 TCTTCATCCCACAAATC-AGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGG 20731 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||| || || || ||||| | | ||||||||| || ||||| || ||||| |||||||| Sbjct 20730 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 20671 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 | |||| || || || || || || || || |||||||| || || | || ||| || || Sbjct 20670 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATT 20611 Query 22585 TCTCAAGCCGTGCTTTGAAAT-TTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 | ||| || || |||| || ||| || || || | | ||||||||| || || | | Sbjct 20610 GCGCAAACCATGTTTTGCTATCTTTTCT-TTAAGGACAGCCCAGTCCCAAAGGTCTGTAG 20552 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 | || |||||||||||||| || || | | || | || || || || |||| | Sbjct 20551 GAGT---TTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGAT 20495 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763 | || ||| | ||| | | | | || | ||| || || || || | || || |||| Sbjct 20494 ATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCACCATAAT 20435 Query 22764 ATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG----GCGGCGACGCTTTCGTACGGC 22819 | ||||| || || || ||||| | | | | || | |||||||| | Sbjct 20434 AAATAGTTTCAAATAT----TTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGAT 20379 Query 22820 ATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 || | ||||| ||| ||||| || ||||| |||||||| || ||||| || |||| | | Sbjct 20378 ATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGT 20319 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 ||| ||| || |||||| || || | |||||| |||| ||| || | |||| Sbjct 20318 CTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTT 20259 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 || ||| || ||||| || || || | ||| | |||| || Sbjct 20258 AAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAAT--TAAATCTGTTAT 20201 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 | | |||||||| |||| | || || || ||||| ||||| || ||||| || |||| Sbjct 20200 T-TTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCT 20142 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 || ||||| | |||| || || || ||||||||||| || || ||||| | ||| | Sbjct 20141 GAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTT 20082 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 || || || |||| || || | |||||| || | |||||| || || || ||||| || Sbjct 20081 TGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACT 20022 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTC-TGAGCGTGAACACGTCGCACGTACCTGCC 23238 || | || || || | ||| | | || ||||| || || | | | Sbjct 20021 TGGGCTTCTATAATTGACTTCCATA-ACTCTTGAGCTCTGACTTGTTTTATAAATCGTTT 19963 Query 23239 TTCTTCCTCGTACTTTTGG--TACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 |||||| || || ||||| || || | |||||||| | || | ||||| || ||| Sbjct 19962 TTCTTCTTCATA--TTTGGTATATAATTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGG 19905 Query 23297 CCGGGCGATTG-CAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCA 23354 || | || || ||| ||||||||||||||||| | | || ||||| || | | ||| Sbjct 19904 CCAG--GACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTTTTCA 19847 Query 23355 TAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGC 23414 |||| ||||| |||||||||| ||| || |||||||| | || | || || || || | Sbjct 19846 TAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTAC 19787 Query 23415 CGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474 | |||||||| || |||||||| || || || | |||||||||||| ||||| | |||| Sbjct 19786 CTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATAAA 19727 Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGT 23534 ||||| ||||| || | || || || || ||||| || || | ||| || ||||| | Sbjct 19726 TTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTAT 19667 Query 23535 ACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAAC 23594 ||||||| | ||| ||||| ||||| || || | || ||| || | |||| Sbjct 19666 ACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGAAC 19607 Query 23595 CTTTTGCTC-GA-ACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 | | |||| || | |||| | || ||||||||||| || | ||||| || || | Sbjct 19606 CCTGAGCTCTGATGCAATGTGTA--TGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 19549 Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712 || |||||||| | ||| || | || || || ||||| || ||||| | || | | Sbjct 19548 TGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAG 19489 Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772 |||||| || || | || | || || || || ||||||||||| ||||| || || Sbjct 19488 GAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATG 19429 Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832 ||||| ||| | ||||| | ||| || || | ||| || ||||||||| || || Sbjct 19428 TGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACC 19369 Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 || || || |||| ||| | ||| | ||||| |||||| || || Sbjct 19368 ATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 19324 >seq7375 Length=9560 Score = 143 bits (158), Expect = 2e-29 Identities = 164/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 57634 AGGATCTGAGC-GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692 |||| || ||| |||||||| | | ||||| | ||||| | ||||||| || || || Sbjct 3811 AGGA-CTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCATGTC 3869 Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752 || || || || || || || |||||||||||||| ||||| ||||| || | || ||| Sbjct 3870 TTAGCATTCTTTGCAGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTCTCA 3929 Query 57753 CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAAC 57812 ||||| || |||||||| || || || ||||| || || |||||| | || || ||||| Sbjct 3930 CAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAAT 3989 Query 57813 GTGCATTCAGAAATGTATTCGCTACTCATCGATACGTA 57850 || |||||||| ||||| || || | || || || || Sbjct 3990 GTTCATTCAGAGATGTACTCTTTATTAATTGACACATA 4027 Score = 104 bits (114), Expect = 2e-17 Identities = 120/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379 || ||||| ||| | ||||| || |||||||||||||| |||||| | || ||||| ||| Sbjct 6729 CACTACAATACGCAGAATCCATTCGATTTTATGAATCTCATCTCGTTGGAAGGCAAAACA 6788 Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAG 58439 ||||| || || || |||||| | ||||| || || | || |||||| ||| ||| Sbjct 6789 AACTTCTTTGAGAAGAAAGTTGGAGAATACCAGAAGTGGGGAGTGATG-GCG----CAAC 6843 Query 58440 TTGGAGGACGATATTTTCACTTTGGATGCTGCCTTTTAA 58478 | |||| || | |||||||| ||||||| |||||| Sbjct 6844 CT-ATGGACAATGTCTTCACTTTAGATGCTGAATTTTAA 6881 Score = 98.7 bits (108), Expect = 9e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 ||||||||||| ||| | | | ||||| ||| ||||| || || | || | Sbjct 4673 AAGAAGGCAGACTGGGCGTTACAGTGGATCGGCAGCAAGACGGCTACATTTGGAGAACGT 4732 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 |||| || || || || || || || ||||| || || ||||||||||| |||||||| Sbjct 4733 ATAATTGCTTTTGCAGCGGTTGAGGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTT 4792 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 ||| |||| ||||| || ||||||||||| |||| || ||||| || Sbjct 4793 TGGTTGAAAAAACGAGGTCTGATGCCCGGATTGACTTTCAGCAATGA 4839 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/131 (76%), Gaps = 6/131 (5%) Strand=Plus/Plus Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGA---TTTGTCATGTTTCCGATTGAATATCC 57565 |||||| || ||| || ||| ||| |||| || || || || || || ||||||| Sbjct 3542 TGAACCCCTGTTG--AGGGAAAACCC-TAGACGTTTCGTTATATTCCCAATCCAATATCC 3598 Query 57566 AGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGA 57625 ||| || ||| | ||||| ||||| || ||||||||||||||||| | ||||||||||| Sbjct 3599 AGATATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGGACTGCAGAAGAAGTAGA 3658 Query 57626 CCTGTCTAAGG 57636 | | || |||| Sbjct 3659 CTTATCCAAGG 3669 >seq52194 Length=4646 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || ||||| | || ||||| || ||| Sbjct 3660 ATGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTTGAGCCATCC 3601 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||||| || || | || |||||||| ||| | || || ||||| Sbjct 3600 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 3541 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| ||||||||||| || ||| || ||||||||| Sbjct 3540 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGATTATAAC 3481 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||||||||| || | ||| | |||||| Sbjct 3480 ATCCAAAAAGAATCTACCTTGCATTTAGTACTT 3448 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || |||||||| || ||||| ||||| ||||| | || |||||||| || Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || ||| | || ||||| || || | || || || || Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGATCAA 3769 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||||||||| ||| |||| || | ||| | || || || Sbjct 3768 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 3709 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||||| ||||| || ||| | || ||||| Sbjct 3708 ATTCAGAAAGAGTCCACTTTGCACTTGGTA 3679 >seq9095 Length=14658 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||||||||| ||||| ||||| || ||||| | || ||||| || || Sbjct 6436 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTCT 6377 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| || ||| ||| || || || | || || || ||| Sbjct 6376 GATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAG 6317 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369 || | || || || ||||| || ||| | ||||| | | | ||||| ||||| Sbjct 6316 CAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGA-TGGACGCACACTAT--CTGATTAC 6260 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| |||||||| ||| | || || ||||| | ||||| || || Sbjct 6259 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGG 6210 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| |||||||| ||||| || ||||| ||||| | || || ||| | || Sbjct 5524 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 5465 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || | ||| ||||||||||| | || || ||||| Sbjct 5464 GATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 5405 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | || || ||||||||||||||| | ||||| | | | ||| || || ||||| Sbjct 5404 CAGAGGCTGATTTTCGCTGGCAAACAGCTAGAAGA-TGGACGCACTCTGTCTGACTATAA 5346 Query 31372 CATTCAAAAAGAATCGACT 31390 |||||||| ||||| ||| Sbjct 5345 TATTCAAAAGGAATCTACT 5327 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||||||||| ||||| || ||||| ||||| | || || ||| | || Sbjct 4840 ATGCAAATTTTCGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 4781 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || | ||| ||||||||||| | || || || || Sbjct 4780 GATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 4721 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||| || || ||||||| || || || ||||| Sbjct 4720 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATAAT 4661 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || |||||||| |||||||| || || || ||||| || || ||| Sbjct 4660 ATCCAGAAAGAATCTACTCTTCACCTTGTTCTCAGACTTAGAGGTGGT 4613 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| ||||| || || || || ||||| || || | || ||||| || || Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| || ||||| || | || || ||||| Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 5177 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG---ACTATGAGCGATTAT 31369 ||| | || || |||||||| ||||| | ||||| | | | ||||| | || || Sbjct 5176 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGA-TGGACGCACACTATCA--GACTAC 5120 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| || ||||| ||| | ||| | |||||| | ||||| || || Sbjct 5119 AACATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 5070 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || ||||| |||||||| || ||| | || || ||| | || Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||||| || ||| || || || |||||| |||||| | || || || || Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAG-ATTCAGGACAAAGAAGGCATTCCTCCTGATCA 5634 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || | || || |||||||| || || ||||||| Sbjct 5633 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGA 5598 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || ||||| || ||||| |||||||| ||||| | || || ||| | || Sbjct 6208 ATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 6149 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || || ||| ||| || || ||| | || || || || Sbjct 6148 GATACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCAA 6089 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || | || || || ||||| || ||| | ||||| | | | ||| | || || || Sbjct 6088 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGCACTCTATCTGACTACAA 6030 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| ||| | ||||||||||| | ||||| || || Sbjct 6029 TATTCAGAAGGAATCTACTTTGCATCTGGTACTACGGCTGAGAGGTGG 5982 >seq58137 Length=8097 Score = 104 bits (114), Expect = 2e-17 Identities = 154/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 |||||| ||||| || || || || || || || || ||||| || || | || ||||| Sbjct 7527 ATCAAA-ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGA 7585 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 ||| ||||| | | | |||| || ||| | ||| |||||||||||| | || || Sbjct 7586 ACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCC 7645 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || || || ||| | || |||||||| || || ||||||||| || | || Sbjct 7646 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGA 7705 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 || || |||||||||||||| |||||||| ||||| Sbjct 7706 CTACAATATTCAAAAAGAATCTACTCTTCACTTGGTA 7742 >seq21475 Length=13715 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || || ||||| || ||| |||| || || | || Sbjct 10896 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCT 10955 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | ||| || |||||||| | || || |||||| Sbjct 10956 GATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAG 11015 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||| | || || ||||| ||||| | ||||| | | | || || || || || Sbjct 11016 CAACGTTTGATCTTTGCTGGTAAACAACTAGAAGA-TGGACGTACATTGTCTGACTACAA 11074 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||| ||||| || | ||||| || ||| |||| | || |||| Sbjct 11075 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTA 11124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444908528135280