Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 535 5e-147
seq7375 86.0 8e-12
seq7176 86.0 8e-12
>seq4562
Length=21325
Score = 535 bits (592), Expect = 5e-147
Identities = 1110/1628 (68%), Gaps = 53/1628 (3%)
Strand=Plus/Minus
Query 62026 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 62085
|||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 62086 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 62145
|||||||||| ||||||| ||| | |||| ||| ||||| || ||| |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 62146 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 62205
||| | || | || | |||||| || | |||||||||||| || || || ||||| |
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 62206 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACT 62264
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 62265 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTACCATAATC 62321
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 20860 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 20802
Query 62322 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGG 62381
|| || || || |||| ||| || | | || ||| | | || ||||| ||
Sbjct 20801 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 20742
Query 62382 TTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62441
|| ||||| | ||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 20741 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 20682
Query 62442 TCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62501
|| | || ||| | || || | |||||| ||||| || |||||||||||||| || | |
Sbjct 20681 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 20622
Query 62502 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCC 62559
|||| | ||| | | ||| ||||| || || || ||||| || |||| | ||
Sbjct 20621 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 20564
Query 62560 AAAGATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTG 62612
|||| || | || | | ||| ||| || || ||||| | ||
Sbjct 20563 AAAGGTCTGTAGGAGTTTTGTCCCACATATC-------ATACTGGAGGATACCTTGGCTT 20511
Query 62613 GC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGC 62671
|| | || ||| |||||| |||| ||||| || ||||||| || |||||| ||
Sbjct 20510 GCTGGACTC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGC 20452
Query 62672 CTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGG 62731
|||| |||||| |||||||| |||||||| || | | ||| ||| | ||||| |
Sbjct 20451 TTCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTC 20392
Query 62732 GCTATCAAATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATAC 62790
|| || | | ||| | | | | | |||||| || || | || |||||||||||||
Sbjct 20391 ACTTTCGTAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATAC 20333
Query 62791 CGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATAT 62850
| ||||||||||||||| |||| || ||| ||||| || | ||||||| |||||| ||
Sbjct 20332 CAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACAT 20273
Query 62851 CTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAA 62907
| |||| ||| || | |||| | ||||| ||||| | || || | ||| ||
Sbjct 20272 CAATAACTTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAA 20216
Query 62908 AATCAAATCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGG 62967
||| ||||| || | ||||||||||| | ||| | || || || || ||||| |
Sbjct 20215 AATTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTG 20156
Query 62968 CTACCTCATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 63024
| || |||| | || | | ||||| | | ||| ||||||||||| ||||| || |
Sbjct 20155 CCACTTCAT---CTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAA 20099
Query 63025 TAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 63084
|||| || | ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||
Sbjct 20098 TAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATG 20039
Query 63085 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 63144
| |||||||| || | || | ||||||||| | ||||| | || |||| | | |
Sbjct 20038 GTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTT 19979
Query 63145 TAGATTTGTATCTCCTTTCTCTT--TCGTATAGAGTATACAATCGTTCGAACTCGTCTCC 63202
| ||| || || ||| |||| || ||| ||||| ||| ||| || || |||||
Sbjct 19978 --GTTTTATAAATCGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCC 19921
Query 63203 CCAAACATTGTCCAAT-CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63261
|| || | | | | ||||| |||| |||||||| | ||| || | || |
Sbjct 19920 A-AAGCAGTCAGCGAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTT 19862
Query 63262 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTC 63321
| |||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||
Sbjct 19861 TTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTC 19802
Query 63322 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63381
| ||| || || ||||| ||||| || | ||| | ||| | | || || | |||||
Sbjct 19801 TCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCC 19742
Query 63382 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63441
| || || || || || || | | || || ||||||||||| || ||||||| ||||
Sbjct 19741 AAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATC 19682
Query 63442 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTAC 63501
| || || || ||||| |||||||||||||| | | ||| || || | ||||| || |
Sbjct 19681 TGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGC 19622
Query 63502 CGGAGATATAGCCTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCT 63557
| | || || || ||| || | || || || || || |||||| || ||
Sbjct 19621 CAGCTATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCA 19566
Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617
|| |||||| |||||||| ||| ||||||| || ||| | || ||||| ||||||||
Sbjct 19565 GCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCG 19506
Query 63618 TCGATCAT 63625
|| ||||
Sbjct 19505 TCTTTCAT 19498
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076
|| || || || || |||| ||| ||||| ||||||||||| || | ||||||||||||
Sbjct 18225 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 18166
Query 64077 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64136
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 18165 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 18106
Query 64137 GTTACTCCATTATATATTCC 64156
||||| ||| |||||| ||
Sbjct 18105 GTTACACCAGAATATATGCC 18086
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 63807 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63866
|| |||||||| |||||||| || ||| ||||||||||||| ||||||||||||||||||
Sbjct 18969 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 18910
Query 63867 GAAAAGTCTCGTTCGTAAATAAT 63889
||| |||| || |||| |||
Sbjct 18909 TTAAAATCTCTATCATAAACAAT 18887
>seq7375
Length=9560
Score = 86.0 bits (94), Expect = 8e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127
|| |||| || |||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 3667 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3608
Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|| || || |||||||||||||||| ||||| ||
Sbjct 3607 CATATATCTGGATATTGGATTGGGAATATAACGAA 3573
>seq7176
Length=6331
Score = 86.0 bits (94), Expect = 8e-12
Identities = 244/370 (66%), Gaps = 9/370 (2%)
Strand=Plus/Plus
Query 155252 TTATGACTCCA--ATTAATCCCATGTTAGCGGAATCATGTGATTCTGTCAATAAGGCGTT 155309
||||||||||| |||| || |||||||| ||| | || | || || | | ||| |
Sbjct 2579 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 2636
Query 155310 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 155369
||||||| |||| || |||||| | || | ||||| ||||| ||| | || |||||
Sbjct 2637 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2696
Query 155370 TCATaaaaaaaaTAACGAGTTTGCATTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 155429
|||||||| || ||||| || ||| | | | ||||||||| | ||||
Sbjct 2697 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2756
Query 155430 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCG 155488
||||| | || | ||||| || | || ||||||||| ||| | | | || |
Sbjct 2757 CAAAGTTAGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGAGATGACT-TGA 2815
Query 155489 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAA 155545
| |||||| ||||| | || | || || | ||| || ||| | || || || |
Sbjct 2816 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2875
Query 155546 GTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTG 155605
|||||||| |||||| | ||||| |||| | || | | || || | | ||||
Sbjct 2876 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 2935
Query 155606 ACTGTTTATA 155615
| || |||||
Sbjct 2936 ATTGCTTATA 2945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628605523901520
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