Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 527 6e-145
seq7375 136 4e-27
>seq4562
Length=21325
Score = 527 bits (584), Expect = 6e-145
Identities = 1186/1762 (67%), Gaps = 31/1762 (2%)
Strand=Plus/Minus
Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864
|||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| | ||
Sbjct 21071 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAAACCCATTTTC 21012
Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924
|| ||| ||||| || || |||||| | || |||| ||| | | || || |
Sbjct 21011 CAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGTTTAGCAACATGGATGTTG 20952
Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984
| ||||||||||| |||||||| || ||||| || |||||||| | || | || ||
Sbjct 20951 AAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCCATCTGTA---TGGATGTT 20895
Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTA-- 37039
| | || |||||||| || ||||| || | | | |||| || | | | || | |
Sbjct 20894 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT-TTCTTTAGGAATTTTTTC 20836
Query 37040 AATGT--TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACAT 37097
||| | || ||||| ||||| | | | ||| || || || || | || |||||
Sbjct 20835 AATTTCTTGTATAGATCCATTGTTGTATATAATAAGGTTTTTCATATCTTCATCCCACAA 20776
Query 37098 ATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAA 37157
|| | | | || ||| || || | || || || |||| |||||||||||
Sbjct 20775 ATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAA 20716
Query 37158 TACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAAT 37215
||||||||| ||| |||| ||| | ||| | ||||||| || ||| | || | |
Sbjct 20715 GACTCTTCTTTGGTAAATAT-TTGAT-GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGA 20658
Query 37216 ATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGT 37275
||||| | ||||| ||||| ||||| || ||||| | || ||| | ||| ||||||
Sbjct 20657 ATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGT 20598
Query 37276 GTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCAC 37335
| || | | ||| || || ||| ||||| | ||||| || | || ||||
Sbjct 20597 TTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCAC 20538
Query 37336 ATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCG 37395
|||||||| || || ||||||| || |||||| | | |||||| || | ||
Sbjct 20537 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 20478
Query 37396 TAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATT 37455
| ||| ||||| ||| ||||||| ||||||||| ||||||| || ||||| || |||
Sbjct 20477 TCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCACCATAATAAATAGTTTCAAATATT 20418
Query 37456 TGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT-AATATAAACAC 37514
||| ||| | | | |||||| || || ||| | | ||| | || || | |||| |
Sbjct 20417 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAG-ATATTCTCATCAACACAAACGC 20359
Query 37515 ATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGA 37574
||| |||| ||||||||||| ||||| || ||||||||| || |||| || | |
Sbjct 20358 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 20299
Query 37575 TTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTT 37634
||| || |||||| |||| | ||| || | ||| |||| ||||| | || || ||
Sbjct 20298 TTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTT 20239
Query 37635 CGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGA 37694
|| ||| | | || || | || ||||| |||||| | |||||| | | | |
Sbjct 20238 TGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCAACAAACATGTTAAGTGC 20179
Query 37695 AATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGT 37754
|| || | || || || || || ||||||||||| | | |||| | || ||||||
Sbjct 20178 TATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCTGT 20119
Query 37755 ACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGA 37814
|| ||||| || || |||| || || | ||| ||||||| ||| | |||||||
Sbjct 20118 GCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGC 20059
Query 37815 ATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCA 37874
||| ||||| | || || || || || || | ||| || || ||||| || |||||
Sbjct 20058 ATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCA 19999
Query 37875 TAAACTTCTTG--CTTTAACGATCGCTTTA---Att-tttttCTTTGTTTCGTATTCTAT 37928
||| ||||| || | || | | |||| || |||||||| ||| |||| |
Sbjct 19998 TAAC--TCTTGAGCTCTGAC--TTGTTTTATAAATCGTTTTTCTTC--TTCATATTTGGT 19945
Query 37929 ATATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGAC 37987
|||||||| | ||| || | | || | || || | || |||| || ||||
Sbjct 19944 ATATAATTCTTCAAATTCCT-CTCCAAAGCAGTCAGCGAGGCCAGGACTGTCATGAGGAC 19886
Query 37988 ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATA 38047
|||| ||| ||| |||||||||||||||| | || |||||| | ||| |||| |||||
Sbjct 19885 ACATGAGACTCCAAACTTCATCTTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATA 19826
Query 38048 ATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTA 38107
| ||| ||| | ||| | | ||| |||||| || ||| ||||| |||| |
Sbjct 19825 AAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCA 19766
Query 38108 GAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTT 38167
|| || ||||| || || ||||| || |||| |||||| | | ||| || || | ||
Sbjct 19765 AGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTT 19706
Query 38168 TATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTA 38227
| | || || |||| | |||||| | || || ||||| | ||| ||||| || ||||
Sbjct 19705 TGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTA 19646
Query 38228 TACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTA 38287
|||||| || || || | || | ||| |||| ||||| ||||| || | |
Sbjct 19645 GACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTG 19586
Query 38288 TCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAA 38347
| || ||||| ||||| ||| ||| || ||||| || ||||||||||| |||||||
Sbjct 19585 TATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAA 19526
Query 38348 ATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCA 38407
| |||||||| || || || || || || | || | ||||| || | || |||
Sbjct 19525 AAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCC 19466
Query 38408 ATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAAT 38467
|| || | ||| || | |||||| ||||||| | || |||| || ||||
Sbjct 19465 GCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCA 19406
Query 38468 AATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527
|||||| || | ||| || ||| || || | || ||||| |||| || || ||||
Sbjct 19405 TATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTCA 19346
Query 38528 TTAGCATATGTTGTGGTCTTTC 38549
| ||||| ||||| || |||||
Sbjct 19345 TAAGCATGTGTTGAGGCCTTTC 19324
>seq7375
Length=9560
Score = 136 bits (150), Expect = 4e-27
Identities = 170/229 (74%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
||| |||| |||||| || ||||||||| ||||| |||||||||| ||||||||||||
Sbjct 4037 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3978
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008
|||||||| |||||||| || | || || | ||| || || || | || | |
Sbjct 3977 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGTGAGAAACGCT 3919
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
|| | || |||||||| |||||||||||| || |||||| ||||||| | ||| || |
Sbjct 3918 CCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGA 3859
Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATCTAAATC 12114
|||| | ||| || |||| ||||| | |||||||| |||| ||
Sbjct 3858 TAAAATGTTTCTCACAATCTT---TTAATGTCTCCCAATCTGCTAAGTC 3813
Score = 109 bits (120), Expect = 5e-19
Identities = 150/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| |||||||| || || ||||||||||||| ||||||||||| | |||||||||
Sbjct 4845 ATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 4786
Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785
| |||||| || || || ||||||||||| || |||||||| || | || | ||||
Sbjct 4785 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCT 4726
Query 11786 CCATAT---ACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACG 11842
||| || || | ||||| ||||| | | ||||| || || ||||| || ||
Sbjct 4725 CCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACA 4666
Query 11843 CATTCCATTGTTTCTATAGCGTTAAATAA 11871
||| | ||||| || || || |||||
Sbjct 4665 CATGGTAGAGTTTCAATTGCATTGAATAA 4637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467623129878960
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