Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 520 1e-142
>seq4562
Length=21325
Score = 520 bits (576), Expect = 1e-142
Identities = 1099/1620 (68%), Gaps = 37/1620 (2%)
Strand=Plus/Minus
Query 64819 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 64878
|||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 64879 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 64938
|||||||||| ||||||| ||| | |||| ||| ||||| || ||| |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 64939 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 64998
||| | || | || | |||||| || | |||||||||||| || || || ||||| |
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 64999 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 65057
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 65058 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 65114
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 20860 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 20802
Query 65115 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 65174
|| || || || |||| ||| || | | || ||| | | || ||||| |
Sbjct 20801 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 20742
Query 65175 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 65234
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 20741 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 20682
Query 65235 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 65294
|| | ||| ||| | || || | |||||| ||||| || |||||||||||||| || | |
Sbjct 20681 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 20622
Query 65295 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 65352
|||| | ||| | | ||| ||||| || || || ||||| || |||| | ||
Sbjct 20621 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 20564
Query 65353 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTAC 65411
|||| || | || || || ||||| | || || | ||
Sbjct 20563 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGAC 20504
Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471
||| |||||| ||||| ||||| || ||||||| ||||||||| || |||| |
Sbjct 20503 TC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGT 20445
Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531
||||| |||||||| ||||| || || | | ||| ||| | ||||| | || ||
Sbjct 20444 GCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 20385
Query 65532 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590
| | ||| | | | | | |||||| ||||| | || |||||||||||||| |||||
Sbjct 20384 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 20326
Query 65591 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 65650
|||||||||| |||| || ||| ||||| || | ||||||| |||||| ||| ||||
Sbjct 20325 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 20266
Query 65651 TTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 65707
||| || | |||| | ||||| ||||| | || || | ||| ||||| |||
Sbjct 20265 TTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAA 20209
Query 65708 TCGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 65767
|| | || | ||||||||||| | ||| | || || || || || || || || ||
Sbjct 20208 TCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTC 20149
Query 65768 ATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCC 65824
|| | || | | ||||| | | ||| ||||||||||| ||||| || || || ||
Sbjct 20148 AT---CTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCC 20092
Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884
| ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||| |||||
Sbjct 20091 AAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACC 20032
Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944
||| || | || | ||||||||| | ||||| | || |||| | | | | |||
Sbjct 20031 AGTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTT--GTTTT 19974
Query 65945 GTATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 66002
|| || ||| |||| || ||| ||||| ||| ||| || || ||||| || ||
Sbjct 19973 ATAAATCGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCCA-AAGCA 19915
Query 66003 TTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 66061
| | | ||||||| |||| |||||||| | ||| || | || | | ||
Sbjct 19914 GTCAGCGAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTAC 19855
Query 66062 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTC 66121
|| ||||||||| ||||| || ||||| | ||| ||| | ||||| | ||| |||
Sbjct 19854 TCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTC 19795
Query 66122 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTC 66181
|| || ||||| ||||| || | ||| | ||| | | || || |||||| || ||
Sbjct 19794 TTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTC 19735
Query 66182 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 66241
|| || || || | | || || ||||||||||| || ||||||| ||||| || ||
Sbjct 19734 TAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGT 19675
Query 66242 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 66301
|| ||||| |||||||||||||| | | |||||| || ||||| || || | ||
Sbjct 19674 ATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTAT 19615
Query 66302 ATAGCTTCCACTTGCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 66358
|| || || | || || || || || |||||| || || || |||
Sbjct 19614 GTAAGAACCCTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGATTT 19558
Query 66359 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 66418
||| |||||||| ||| ||||||| |||||| | || || || || ||||| || ||||
Sbjct 19557 AGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 19498
Score = 102 bits (112), Expect = 1e-16
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 66599 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 66658
||| |||||||| |||||||| || ||| ||||||||||||| |||||||||||||||||
Sbjct 18970 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 18911
Query 66659 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 66709
| ||| |||| || |||| ||| | |||| | ||| ||||| | |||
Sbjct 18910 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 66810 TTTTTTGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCC 66869
|| || || ||||| |||| ||| |||| |||||||| || || | ||||||||||||
Sbjct 18225 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 18166
Query 66870 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 66929
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 18165 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 18106
Query 66930 GTTACTCCATTATATATTCC 66949
||||| ||| |||||| ||
Sbjct 18105 GTTACACCAGAATATATGCC 18086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 656906154673560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |