Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 134 1e-26
seq89413 107 2e-18
seq52194 107 2e-18
seq21475 107 2e-18
seq58137 98.7 1e-15
seq133270 89.7 5e-13
>seq9095
Length=14658
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || |||||| ||||| || | |||||||| || || || ||||| || |
Sbjct 4842 CCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 4901
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| | ||||| || || || |||||| | ||||| | ||| ||||| |||||
Sbjct 4902 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGA 4961
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||||||||| ||| | |||| |||| | | ||| | |||||| | | |||||
Sbjct 4962 ATGCCTTCTTTGTC-CTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 5020
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | || ||||| |||| ||||| || || ||||||||
Sbjct 5021 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || |||||| ||||| || | |||||||| || || || ||||| || |
Sbjct 5526 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 5585
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| | ||||| || || || ||||| | ||||| | ||| ||||| |||||
Sbjct 5586 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 5645
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||||||||| ||| | |||| |||| | | ||| | |||||| | | |||||
Sbjct 5646 ATGCCTTCTTTGTC-CTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 5704
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | || ||||| |||| ||||| || || ||||||||
Sbjct 5705 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| |||||| || ||||| | |||||||| || || || ||||| || |
Sbjct 6438 CCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 6497
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| | |||||||| || || || || | ||||| | ||| ||||| |||||
Sbjct 6498 AATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 6557
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||| ||||| ||| | |||| |||| | ||| | ||| || | | |||||
Sbjct 6558 ATGCCTTCCTTGTCT-TGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCAC 6616
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || || || ||||||||||| ||||||||
Sbjct 6617 TTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664
Score = 102 bits (112), Expect = 8e-17
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| | ||| | ||||| || | ||||| || || ||||| || || || |
Sbjct 5754 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 5813
Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| ||||| || | ||||| ||||| || |||||| | || || | ||| || || |||||
Sbjct 5814 AGTGTGCGTCCA-TCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGG 5872
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715
|| ||||| || || ||| |||| | ||| | | ||| | |||||| | |||||| |
Sbjct 5873 AATTCCTTCCTTATCT-TGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAA 5931
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || | || | || ||||| |||| || ||||| |||||||||||
Sbjct 5932 CTTCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 5980
>seq89413
Length=986
Score = 107 bits (118), Expect = 2e-18
Identities = 186/266 (70%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 21034 GGTTCGTTCCATGCGCTGACA--CCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGT 21091
|| |||||||||| |||| ||||| || ||||| |||| || ||||| |||||||
Sbjct 986 GGCTCGTTCCATGAA--GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGT 929
Query 21092 GAATGGCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGC 21151
| || | || || ||||| ||||||| || || || || | |||| ||||||||
Sbjct 928 GGATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGC 869
Query 21152 CCGGGA-CACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCG 21210
| || | ||||| | | ||| |||||||| || || ||||| || || | || |||
Sbjct 868 CTTCGATCTCTTTTAAACT-ATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCG 810
Query 21211 TACAACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATAC 21270
|| | ||| || | | || ||| | || | ||| ||||| || | | |||||
Sbjct 809 TAGAGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAG 750
Query 21271 ACACCCCATTCGACAAAGTATGCTCC 21296
||||||||||| || ||||| || ||
Sbjct 749 ACACCCCATTCTACGAAGTAGGCACC 724
>seq52194
Length=4646
Score = 107 bits (118), Expect = 2e-18
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||||| ||||| |||| |||||||| ||||| ||||| || ||
Sbjct 4351 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 4410
Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| || | || | ||||| |||||||| || ||| |||| |||||||| ||||| || ||
Sbjct 4411 AAGGTACGTCCA-TCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGG 4469
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715
|| || ||||| || ||| | || | |||| | ||| | ||||| | ||||| |
Sbjct 4470 AATACCCTCTTTATCT-TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTA 4528
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
| || | || | |||||||| || | || || || ||||||||||||
Sbjct 4529 CTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 4578
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||||| || | ||||| |||||||| ||||||||||| |
Sbjct 3434 CCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGAC 3493
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || || | ||||||||||||| |||| ||||| || || || || ||
Sbjct 3494 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 3553
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | ||| | ||||||| ||||| |||
Sbjct 3554 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAACC 3613
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | || | ||||| || || | || || ||||| || |||||| ||
Sbjct 3614 TCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCATACCT 3664
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||||| || |||||||| || || || || || |
Sbjct 3890 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 3949
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| || || |||||||| |||| |||||||| ||||| |||||
Sbjct 3950 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 4009
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCAC 139716
|| ||||| || || ||| | || | |||| | || || || |||||| ||||| ||
Sbjct 4010 ATTCCTTCCTTATCT-TGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTAC 4068
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || || | ||||| || |||||||||||
Sbjct 4069 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 4116
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||||||||| || || ||||| | || |||||||| ||||| || || ||
Sbjct 3662 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 3721
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | || || ||||| || ||||| | || |||||||| ||||| || ||
Sbjct 3722 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 3781
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || |||||||| ||| || ||| | | ||| | ||||| | ||| || ||
Sbjct 3782 ATTCCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 3841
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | || | || || || || | || ||||| || || |||||| ||
Sbjct 3842 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCATACCT 3892
>seq21475
Length=13715
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| || || ||||||||||| || || || ||| | || | ||||| || ||||||||
Sbjct 11092 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCA-TCTTCTAGTTGTTTACC 11034
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|||| |||||| ||||||||| || || || || ||||| || || |||||| |||
Sbjct 11033 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTT 10974
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
|| | ||| | || || | || ||||||||| | ||| | || || || || | ||
Sbjct 10973 TACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGT 10914
Query 139747 TTTTACGAATATTTGCAT 139764
|| ||||| ||||||||
Sbjct 10913 CTTGACGAAAATTTGCAT 10896
>seq58137
Length=8097
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | |||||| || ||||||| ||||| ||||||||||| || || ||
Sbjct 7759 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAA 7700
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| |||||| | || || ||||| | |||| |||||| ||||| |||||
Sbjct 7699 AGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 7640
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||| ||||| ||| |||| | ||||| | ||| | || |||| || || ||
Sbjct 7639 ATGCCTTCCTTGTC-TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 7581
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || || | ||||| || || || |||||
Sbjct 7580 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
>seq133270
Length=334
Score = 89.7 bits (98), Expect = 5e-13
Identities = 108/145 (74%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| |||||| | |||||||| | ||||| |||||||| ||||| || ||
Sbjct 185 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG-- 242
Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655
|| ||| ||| ||||| | || || || ||| | || |||||||| ||||| ||||
Sbjct 243 ATAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAG 302
Query 139656 GTATGCCTTCTTTGTCGGTGATTTT 139680
| |||||||||||||| ||||||
Sbjct 303 GAATGCCTTCTTTGTCTTGGATTTT 327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495109331032800
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