Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 551 8e-152
seq7375 91.5 2e-13
seq7176 84.2 3e-11
>seq4562
Length=21325
Score = 551 bits (610), Expect = 8e-152
Identities = 1112/1622 (69%), Gaps = 41/1622 (3%)
Strand=Plus/Minus
Query 78698 TTATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 78757
|||| ||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 78758 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGG 78817
|||||||||| ||||||| ||| | |||| ||| |||||| || ||| |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 78818 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 78877
||| | || | || | |||||| || | |||||||||||| || || || ||||| |
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 78878 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 78936
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 78937 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 78993
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 20860 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 20802
Query 78994 CTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 79053
|| || || ||||||| ||| || | | || ||| | | || ||||| |
Sbjct 20801 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 20742
Query 79054 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGT 79113
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 20741 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 20682
Query 79114 TCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACC 79173
|| | |||||| | || || | |||||| ||||| || || || |||||||| || | |
Sbjct 20681 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 20622
Query 79174 AATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCC 79231
|||| | ||| | | ||| ||| | || || || ||||| || |||| ||||
Sbjct 20621 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 20564
Query 79232 AAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATG 79291
|||| || | || | ||| | |||||| || || ||||| | || || |
Sbjct 20563 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGA 20505
Query 79292 ATCCTGTG-TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350
||| || ||||| || | ||||| ||||| |||||||||||||| || |||| |
Sbjct 20504 CTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGT 20445
Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCA 79410
|| || |||||||| ||||| || || | | ||||||| | ||||| || ||
Sbjct 20444 GCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 20385
Query 79411 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469
| | ||| | | | | | |||||| ||||| | || |||||||||||||| |||||
Sbjct 20384 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 20326
Query 79470 TCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 79529
|||||||||| |||| ||| ||| ||||| || | ||||||| |||||| ||| ||||
Sbjct 20325 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 20266
Query 79530 TTTATTGAGATTCCTGACTATTA--CTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 79587
||| || | ||| ||| | | ||||| | || |||| ||| ||||| ||||
Sbjct 20265 TTTGTTTAAATTT-TGAGTTACAATCTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAAT 20208
Query 79588 CGTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCA 79647
| || | ||||||||||| | || | || || || || || || || || |||
Sbjct 20207 CTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCA 20148
Query 79648 TTAGCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704
| | || | | ||||| | | || ||||| || || ||||| ||||| || ||
Sbjct 20147 T---CTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCA 20091
Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764
| ||||| ||||||||||||| ||||||| ||||||||||| | ||| | || ||||||
Sbjct 20090 AGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCA 20031
Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CT---TTATTATAGA 79820
|| || | || | ||||||||| | ||||| | || |||| || || || || |
Sbjct 20030 GTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTATA 19971
Query 79821 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880
||| |||||| ||| |||| ||||||||| ||| || || ||||| || |
Sbjct 19970 A----ATCGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCCA-AAGC 19916
Query 79881 A-TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939
| || | | ||||||| || | ||||||||| | ||| || |||| | | ||
Sbjct 19915 AGTCAGCGAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTA 19856
Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999
||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| |
Sbjct 19855 CTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTT 19796
Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059
| || || ||||| ||||| || | ||| | ||| | | || || | |||||| || |
Sbjct 19795 CTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCT 19736
Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119
| || || || || | | || || ||||||||||| || ||||||| ||||| || |
Sbjct 19735 CTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAG 19676
Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179
| || ||||| |||||||||||||| | | |||||| || ||||| || || | |
Sbjct 19675 TATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTA 19616
Query 80180 TATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235
| || || ||| || | || || || || || |||||| || || || |
Sbjct 19615 TGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGAT 19560
Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295
||||| |||||||| ||| ||||||| |||||| | || || || |||||||| || ||
Sbjct 19559 TTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTC 19500
Query 80296 AT 80297
||
Sbjct 19499 AT 19498
Score = 96.9 bits (106), Expect = 5e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537
||| || ||||| |||||||| || ||| ||||||||||||| |||||||||||||||||
Sbjct 18970 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 18911
Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 80588
| ||| |||| || |||| ||| | |||| | ||| ||||| | |||
Sbjct 18910 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 80689 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748
|| || || || || |||| ||| |||| ||||||||||| || ||||||||||||||
Sbjct 18225 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 18166
Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 18165 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 18106
Query 80809 GTTACTCCATTATATATTCC 80828
||||| ||| |||||| ||
Sbjct 18105 GTTACACCAGAATATATGCC 18086
>seq7375
Length=9560
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505
|| |||| ||||||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 3667 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3608
Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|| || || |||||||||||||||| ||||| ||
Sbjct 3607 CATATATCTGGATATTGGATTGGGAATATAACGAA 3573
Score = 86.0 bits (94), Expect = 9e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 50210 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269
|||| ||| ||| | | ||| || || || || | | ||||| || ||||||| |
Sbjct 4047 TTTCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACAT 3988
Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329
|||| || || || ||||| || ||||| || || || || || | || || |||
Sbjct 3987 TTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTG 3928
Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389
| || || || | || || ||||| || || || ||| |||||||| || || || |
Sbjct 3927 AGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGA 3868
Query 50390 CATGTTTTATAAAATGTTTTTC 50411
|||| || ||||||||||| ||
Sbjct 3867 CATGCTTGATAAAATGTTTCTC 3846
>seq7176
Length=6331
Score = 84.2 bits (92), Expect = 3e-11
Identities = 221/332 (67%), Gaps = 9/332 (3%)
Strand=Plus/Plus
Query 173691 TTATGACTCCA--ATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTT 173748
||||||||||| |||| || |||||||| ||| | || | || || | | ||| |
Sbjct 2579 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 2636
Query 173749 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 173808
||||||| |||| || |||||| | || | ||||| ||||| ||| | || |||||
Sbjct 2637 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2696
Query 173809 TCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 173868
|||||||| || ||||| | ||| | | | ||||||||| | ||||
Sbjct 2697 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2756
Query 173869 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCA 173927
||||| | || | ||||| || | || ||||||||| ||| | | | || | |
Sbjct 2757 CAAAGTTAGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGAGATGACT-TGA 2815
Query 173928 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAA 173984
| |||||| ||||| | || | || || | ||| || ||| | || || || |
Sbjct 2816 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2875
Query 173985 GTTTAGGTATACACAAAAAGAAAGAATATAAA 174016
|||||||| |||||| | ||||| ||||
Sbjct 2876 CATTAGGTATTCACAAACAATCAGAATTTAAA 2907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716886500672760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |