Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq7375 134 1e-26
>seq7375
Length=9560
Score = 134 bits (148), Expect = 1e-26
Identities = 166/225 (74%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
||||||| ||| ||||||||| || ||||| || ||||| ||||||| ||||||||
Sbjct 4859 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 4802
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
||| ||||||||||||| |||||| || || || |||||||||||||| || |||||
Sbjct 4801 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAA 4742
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
|| |||| ||||||||||| | || | ||| | ||||| | | ||||| ||
Sbjct 4741 AGCAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 4682
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| || || |||| | | | |||||||| ||||| |||||
Sbjct 4681 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 4637
Score = 104 bits (114), Expect = 2e-17
Identities = 155/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201
|| ||||| ||||| | ||| ||||| || || || | ||||||||||| || |||
Sbjct 4030 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 3971
Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261
|||||||| ||||| || ||||| | | ||| || || | || | || ||||
Sbjct 3970 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 3911
Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321
|| |||||||| ||||||||| ||||||||| ||||| || | | || ||||| | |
Sbjct 3910 TTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGT 3851
Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361
| ||| || || | | | | |||||| | ||| ||||
Sbjct 3850 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 3811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478804769460600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |